TKTL1 (transketolase like 1) - Rat Genome Database

Name: TKTL1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TKTL1 (transketolase like 1) Sus scrofa

Analyze

Symbol:

TKTL1

Name:

transketolase like 1

RGD ID:

14042144

Description:

ENCODES a protein that exhibits catalytic activity (inferred); thiamine pyrophosphate binding (inferred); transferase activity (inferred); ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); Barth syndrome (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transketolase-like protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TKTL1 (transketolase like 1)	HGNC	Ensembl, NCBI, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Tktl1 (transketolase-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tktl1 (transketolase-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tktl1 (transketolase like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TKTL1 (transketolase like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TKTL1 (transketolase like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tktl1 (transketolase like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TKTL1 (transketolase like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tktl1 (transketolase like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TKTL2 (transketolase like 2)	HGNC	OrthoDB

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	124,839,995 - 124,867,614 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	124,840,072 - 124,867,313 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

Molecular Function

catalytic activity (IEA)

thiamine pyrophosphate binding (IBA,IEA)

transferase activity (IEA)

transketolase activity (IBA,IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TKTL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	124,839,995 - 124,867,614 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	124,840,072 - 124,867,313 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TKTL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	154,295,795 - 154,330,350 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	154,295,795 - 154,330,350 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	153,524,148 - 153,558,700 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	153,177,345 - 153,211,894 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	153,044,997 - 153,079,545	NCBI
Celera	X	153,685,095 - 153,719,771 (+)	NCBI		Celera
Cytogenetic Map	X	q28	NCBI
HuRef	X	142,101,239 - 142,134,950 (+)	NCBI		HuRef
CHM1_1	X	153,435,658 - 153,470,347 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	152,532,310 - 152,566,865 (+)	NCBI		T2T-CHM13v2.0

Tktl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	73,220,865 - 73,252,104 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	73,220,865 - 73,252,106 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	74,177,259 - 74,208,498 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	74,177,259 - 74,208,500 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	71,422,598 - 71,453,837 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	70,430,004 - 70,461,211 (+)	NCBI		MGSCv36	mm8
Celera	X	65,429,659 - 65,462,614 (+)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	37.83	NCBI

Tktl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	157,105,455 - 157,138,510 (+)	NCBI		GRCr8
mRatBN7.2	X	151,954,261 - 151,987,208 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	151,954,175 - 151,987,208 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	154,095,403 - 154,128,342 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	157,658,639 - 157,691,577 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	155,330,437 - 155,363,375 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	156,507,797 - 156,540,733 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	156,507,797 - 156,540,733 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	151,506,633 - 151,523,468 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	1	152,248,857 - 152,281,793 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	160,144,916 - 160,177,852 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	135,909,517 - 135,940,852 (-)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

Tktl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955580	829,594 - 851,470 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955580	829,653 - 851,422 (+)	NCBI	ChiLan1.0	ChiLan1.0

TKTL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	154,263,474 - 154,304,907 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	154,267,079 - 154,308,512 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	143,736,589 - 143,772,277 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

TKTL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	122,007,270 - 122,034,500 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	122,007,282 - 122,034,255 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	107,336,003 - 107,363,191 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	125,148,940 - 125,176,143 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	125,148,958 - 125,176,646 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	120,918,050 - 120,945,228 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	123,433,366 - 123,460,383 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	123,194,859 - 123,221,957 (+)	NCBI		UU_Cfam_GSD_1.0

Tktl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	119,310,855 - 119,346,858 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936809	1,048,672 - 1,083,994 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936809	1,048,672 - 1,084,125 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TKTL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	128,607,766 - 128,642,074 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	128,607,901 - 128,642,063 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	66,535,359 - 66,559,996 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tktl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624946	760,078 - 775,073 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TKTL1
229 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	nervous system	reproductive system
High
Medium
Low	2
Below cutoff	11	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021080741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021080743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01052879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000031565 ⟹ ENSSSCP00000020565

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	X	124,839,995 - 124,867,614 (+)	Ensembl

RefSeq Acc Id:

XM_021080741 ⟹ XP_020936400

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	124,840,465 - 124,867,313 (+)	NCBI

Sequence:

show sequence

AGGGAGCTGCCGGGCGCTCGTGAAGTACACCTCACGGCGCACACCTCGCGGCACTTGTTCCTCA
GACGCCAGCGGGGTCGCAGCTATGGCGGACGCCGAGGCGAGCACTGCGGTGGCTGAGGAGGCCA
AGCCGGACGCGAAGACTCTGCAGGTGCTGCGCGACCTGGCCAACCGCCTGCGCATCCAGTCCAT
CAGGGCCACCTGCGCCTCGAGCTCCGGCCACCCCACCTCATGCAGCAGTGCTGCAGAGATCATG
TCTGTGCTGTGCTTCCACGTCATGAAGTATAAACAGACGGACCCGGAGAACCCAGACAACGACC
GACTCGTCCTCTCCAAGAGACTGTCGTTTGTTGATGTGGCAATTGGATGGCTCGGGCAAGGACT
GGGAGCCGCGTGCGGGATGGCATACACTGGCAAGTACTTTGACAAGGCCAGCTACCGGGTGTTC
TGCCTCATGGGAGATGGCGAGTCATCAGAAGGCTCCGTCTGGGAGGCCTTGGCCTTTGCTTCCC
ACTACAGTCTGGACAATCTGGTGGCCGTCTTCGATGTGAATCGCCTGTCCCACAGTGGAACCTT
GCCCCTCGAGCACTGCATAGACGTCTATCAGAAGCGCTGTGAAGCATTCGGGTGGAATACTTTC
GTGGTGGATGGCCGTGACGTGGAGGCACTCTGCCAGGTGTTCTGGCAGGCATCGCAAATGAAGA
GCAAGCCCACTGCTGTCGTTGCCAAGACCTTCAAGGGCCGTGGCGTTCCAAGTGTTGAGGATGC
AGAAAATTGGCATGGAAAGCCAATGCCAAAAGAGAGAGCAGATGCAATTATCAAACTAATCGAG
AGCCAGATACAGACCAACAGGAACCTCGAACCAAAACCCCCTGTTGAAGACTCACCTCAAATCA
ACATCACAGATATAGAAATGACCTCTCCACCTGCTTACAAAATCGGCGATGTGGTAGCTACTCG
CAAAGCATGTGGTTTGGCTCTGGCTAAGCTGGGTCATGCAAATGATAGAGTCATTGTGCTGGAT
GGTGACACCAAGAATTCCACCTTCTCTGAGATATTCAAGAAGGAATACCCTGAGCGCTTCATCG
AGTGCTTTATTGCTGAGCAAAACATGGTGAACGTGGCACTGGGATGTGCCACCCGTGATCGGAC
CGTTGCTTTCGTGTGTACCTTCGCTGCCTTTTTGACCCGAGCGTTTGACCAGATCCGCGTGGGA
GCCATCGCTCAAACCAACATCAACCTCGTTGGGTCCCACTGTGGGGTATCCGTAGGTGAAGACG
GCCCCTCCCAGATGGCCCTGGAGGATCTGGCCATGTTCCGAGCCATCCCAAACTGCACTGTCTT
CTATCCAAGTGATGCCGTTTCCACGGAGCATGCTGTTTTCCTGGCGGCCAATACCAAGGGGATC
TGCTACATTCGGACCAGTCGCCCAGAAAGTGCAGTTGTTTACACCCCACAAGAGAGCTTTCAGA
TTGGACAGGCTAAGGTCATCCGCCAGAGCGTCAACGACAAGATCACAGTTGTTGGAGCAGGAGT
TACTTTGCATGAAGCCTTAGCAGCTGCAGATGAGCTTTCCAAGCAGGATATTTCTGTCCGTGTC
ATCGACCTGTTTACTGTTAAACCCCTGGATGCTGCCACCATCATCTCGAACGCAAAAGCCACAG
GCGGCCGGATTATCACAGTGGAGGATCACTACCCAGAAGGTGGCATCGGGGAGGCCATCTGTGC
AGCGGTCTCCATGGAGCCTGACATCCTGGTCCATCAGCTGGCAGTGCCAGGAGTGCCTCGGAGT
GGGAAGCCGAGTGAGCTGCTGGATGTGTTTGGAATTAGTGCCAGACACATCATAGTGGCTGTCA
AATGCGTTCTGATGAATTAAAACAGCTGTGGGCTTTGGTCTTGAGAGACCAGCCCCAATACCTC
ACGTTTAGGCTTTGGTGCCACACGGTGATTTAAATGTACACTGTGGTGCTTTTACTACTTTCAG
AAGCAAGACAAGTTAACTCCTTTCCTGTTAAGCCATAACTACATACATAAGTGTAACTCTTTTG
AATCTTTACATTATAAGAAAAGAATAGCTAACAAAACAACCACCTGATCATAAGTGTTCTGATG
AGACTACAGATAACCGGGCATAGGGTTAGGAGGCCAACAGAGGGCAACAGTTTGTGAAATGGGT
GTACTTTTCCTTGTGAGTAGAGGAAGTGTGAATTGAAGTGGAGACTGCAGTCGCCCAGATTGCA
GCCCGTATCACTGCGCTGCGCACTGCTGCCGTCCTACCTGCAGCCTCCCAGGTACCGTGTGACT
GCAGTTGCCCTGGAGTGTCCTCCGGTGTTTGCTTTCATCTCCCTCCTACGGCGCGGTGGCCATA
GAGTAGCAGCGAAAGCTCTCAGGACGTCCTGCGCTGCTTGCAGTGACGGTTCTGTGAAGAGAGG
ACACACCTAGTTCTAGCTCCACACTGCACCTCTTGGGAGATCTCAGAGGTGTCTCCTTTGCCCA
GTGAGCAAATGAAACTGTTAGCTCAATTACATTCATGTCCTAAAGATACTAGTTAAAGTTAATA
AAGCAATTAAAAACCA

hide sequence

RefSeq Acc Id:

XM_021080743 ⟹ XP_020936402

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	X	124,840,072 - 124,867,313 (+)	NCBI

Sequence:

show sequence

GGGGTGGTCGCAAACCGTAAAGTTCCAGCGTGGCTTTCTTTGGAGGACGACAAAGTGCGCAAAA
CATAGACTCCGCCGCGGCAACTTTTAAAACGCCAGCGGGGTCGCAGCTATGGCGGACGCCGAGG
CGAGCACTGCGGTGGCTGAGGAGGCCAAGCCGGACGCGAAGACTCTGCAGGTGCTGCGCGACCT
GGCCAACCGCCTGCGCATCCAGTCCATCAGGGCCACCTGCGCCTCGAGCTCCGGCCACCCCACC
TCATGCAGCAGTGCTGCAGAGATCATGTCTGTGCTGTGCTTCCACGTCATGAAGTATAAACAGA
CGGACCCGGAGAACCCAGACAACGACCGACTCGTCCTCTCCAAGAGACTGTCGTTTGTTGATGT
GGCAATTGGATGGCTCGGGCAAGGACTGGGAGCCGCGTGCGGGATGGCATACACTGGCAAGTAC
TTTGACAAGGCCAGCTACCGGGTGTTCTGCCTCATGGGAGATGGCGAGTCATCAGAAGGCTCCG
TCTGGGAGGCCTTGGCCTTTGCTTCCCACTACAGTCTGGACAATCTGGTGGCCGTCTTCGATGT
GAATCGCCTGTCCCACAGTGGAACCTTGCCCCTCGAGCACTGCATAGACGTCTATCAGAAGCGC
TGTGAAGCATTCGGGTGGAATACTTTCGTGGTGGATGGCCGTGACGTGGAGGCACTCTGCCAGG
TGTTCTGGCAGGCATCGCAAATGAAGAGCAAGCCCACTGCTGTCGTTGCCAAGACCTTCAAGGG
CCGTGGCGTTCCAAGTGTTGAGGATGCAGAAAATTGGCATGGAAAGCCAATGCCAAAAGAGAGA
GCAGATGCAATTATCAAACTAATCGAGAGCCAGATACAGACCAACAGGAACCTCGAACCAAAAC
CCCCTGTTGAAGACTCACCTCAAATCAACATCACAGATATAGAAATGACCTCTCCACCTGCTTA
CAAAATCGGCGATGTGGTAGCTACTCGCAAAGCATGTGGTTTGGCTCTGGCTAAGCTGGGTCAT
GCAAATGATAGAGTCATTGTGCTGGATGGTGACACCAAGAATTCCACCTTCTCTGAGATATTCA
AGAAGGAATACCCTGAGCGCTTCATCGAGTGCTTTATTGCTGAGCAAAACATGGTGAACGTGGC
ACTGGGATGTGCCACCCGTGATCGGACCGTTGCTTTCGTGTGTACCTTCGCTGCCTTTTTGACC
CGAGCGTTTGACCAGATCCGCGTGGGAGCCATCGCTCAAACCAACATCAACCTCGTTGGGTCCC
ACTGTGGGGTATCCGTAGGTGAAGACGGCCCCTCCCAGATGGCCCTGGAGGATCTGGCCATGTT
CCGAGCCATCCCAAACTGCACTGTCTTCTATCCAAGTGATGCCGTTTCCACGGAGCATGCTGTT
TTCCTGGCGGCCAATACCAAGGGGATCTGCTACATTCGGACCAGTCGCCCAGAAAGTGCAGTTG
TTTACACCCCACAAGAGAGCTTTCAGATTGGACAGGCTAAGGTCATCCGCCAGAGCGTCAACGA
CAAGATCACAGTTGTTGGAGCAGGAGTTACTTTGCATGAAGCCTTAGCAGCTGCAGATGAGCTT
TCCAAGCAGGATATTTCTGTCCGTGTCATCGACCTGTTTACTGTTAAACCCCTGGATGCTGCCA
CCATCATCTCGAACGCAAAAGCCACAGGCGGCCGGATTATCACAGTGGAGGATCACTACCCAGA
AGGTGGCATCGGGGAGGCCATCTGTGCAGCGGTCTCCATGGAGCCTGACATCCTGGTCCATCAG
CTGGCAGTGCCAGGAGTGCCTCGGAGTGGGAAGCCGAGTGAGCTGCTGGATGTGTTTGGAATTA
GTGCCAGACACATCATAGTGGCTGTCAAATGCGTTCTGATGAATTAAAACAGCTGTGGGCTTTG
GTCTTGAGAGACCAGCCCCAATACCTCACGTTTAGGCTTTGGTGCCACACGGTGATTTAAATGT
ACACTGTGGTGCTTTTACTACTTTCAGAAGCAAGACAAGTTAACTCCTTTCCTGTTAAGCCATA
ACTACATACATAAGTGTAACTCTTTTGAATCTTTACATTATAAGAAAAGAATAGCTAACAAAAC
AACCACCTGATCATAAGTGTTCTGATGAGACTACAGATAACCGGGCATAGGGTTAGGAGGCCAA
CAGAGGGCAACAGTTTGTGAAATGGGTGTACTTTTCCTTGTGAGTAGAGGAAGTGTGAATTGAA
GTGGAGACTGCAGTCGCCCAGATTGCAGCCCGTATCACTGCGCTGCGCACTGCTGCCGTCCTAC
CTGCAGCCTCCCAGGTACCGTGTGACTGCAGTTGCCCTGGAGTGTCCTCCGGTGTTTGCTTTCA
TCTCCCTCCTACGGCGCGGTGGCCATAGAGTAGCAGCGAAAGCTCTCAGGACGTCCTGCGCTGC
TTGCAGTGACGGTTCTGTGAAGAGAGGACACACCTAGTTCTAGCTCCACACTGCACCTCTTGGG
AGATCTCAGAGGTGTCTCCTTTGCCCAGTGAGCAAATGAAACTGTTAGCTCAATTACATTCATG
TCCTAAAGATACTAGTTAAAGTTAATAAAGCAATTAAAAACCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020936400	(Get FASTA)	NCBI Sequence Viewer
	XP_020936402	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000020565
	ENSSSCP00000020565.2
	ENSSSCP00025025732.1
	ENSSSCP00030017226.1
	ENSSSCP00035026807.1
	ENSSSCP00040048258.1
	ENSSSCP00045037797.1
	ENSSSCP00050040035.1
	ENSSSCP00055011257.1
	ENSSSCP00060015263.1
	ENSSSCP00065026519.1
	ENSSSCP00070014928.1

RefSeq Acc Id:

XP_020936402 ⟸ XM_021080743

- UniProtKB:

A0A4X1TES9 (UniProtKB/TrEMBL), I3L954 (UniProtKB/TrEMBL), A0A8D1G542 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADAEASTAVAEEAKPDAKTLQVLRDLANRLRIQSIRATCASSSGHPTSCSSAAEIMSVLCFHV
MKYKQTDPENPDNDRLVLSKRLSFVDVAIGWLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGE
SSEGSVWEALAFASHYSLDNLVAVFDVNRLSHSGTLPLEHCIDVYQKRCEAFGWNTFVVDGRDV
EALCQVFWQASQMKSKPTAVVAKTFKGRGVPSVEDAENWHGKPMPKERADAIIKLIESQIQTNR
NLEPKPPVEDSPQINITDIEMTSPPAYKIGDVVATRKACGLALAKLGHANDRVIVLDGDTKNST
FSEIFKKEYPERFIECFIAEQNMVNVALGCATRDRTVAFVCTFAAFLTRAFDQIRVGAIAQTNI
NLVGSHCGVSVGEDGPSQMALEDLAMFRAIPNCTVFYPSDAVSTEHAVFLAANTKGICYIRTSR
PESAVVYTPQESFQIGQAKVIRQSVNDKITVVGAGVTLHEALAAADELSKQDISVRVIDLFTVK
PLDAATIISNAKATGGRIITVEDHYPEGGIGEAICAAVSMEPDILVHQLAVPGVPRSGKPSELL
DVFGISARHIIVAVKCVLMN

hide sequence

RefSeq Acc Id:

XP_020936400 ⟸ XM_021080741

- UniProtKB:

A0A4X1TES9 (UniProtKB/TrEMBL), I3L954 (UniProtKB/TrEMBL), A0A8D1G542 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADAEASTAVAEEAKPDAKTLQVLRDLANRLRIQSIRATCASSSGHPTSCSSAAEIMSVLCFHV
MKYKQTDPENPDNDRLVLSKRLSFVDVAIGWLGQGLGAACGMAYTGKYFDKASYRVFCLMGDGE
SSEGSVWEALAFASHYSLDNLVAVFDVNRLSHSGTLPLEHCIDVYQKRCEAFGWNTFVVDGRDV
EALCQVFWQASQMKSKPTAVVAKTFKGRGVPSVEDAENWHGKPMPKERADAIIKLIESQIQTNR
NLEPKPPVEDSPQINITDIEMTSPPAYKIGDVVATRKACGLALAKLGHANDRVIVLDGDTKNST
FSEIFKKEYPERFIECFIAEQNMVNVALGCATRDRTVAFVCTFAAFLTRAFDQIRVGAIAQTNI
NLVGSHCGVSVGEDGPSQMALEDLAMFRAIPNCTVFYPSDAVSTEHAVFLAANTKGICYIRTSR
PESAVVYTPQESFQIGQAKVIRQSVNDKITVVGAGVTLHEALAAADELSKQDISVRVIDLFTVK
PLDAATIISNAKATGGRIITVEDHYPEGGIGEAICAAVSMEPDILVHQLAVPGVPRSGKPSELL
DVFGISARHIIVAVKCVLMN

hide sequence

RefSeq Acc Id:

ENSSSCP00000020565 ⟸ ENSSSCT00000031565

Protein Domains

Transketolase-like pyrimidine-binding

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000029443	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025044658	UniProtKB/TrEMBL
	ENSSSCG00030026907	UniProtKB/TrEMBL
	ENSSSCG00035049558	UniProtKB/TrEMBL
	ENSSSCG00040075861	UniProtKB/TrEMBL
	ENSSSCG00045031796	UniProtKB/TrEMBL
	ENSSSCG00050068034	UniProtKB/TrEMBL
	ENSSSCG00055007366	UniProtKB/TrEMBL
	ENSSSCG00060026536	UniProtKB/TrEMBL
	ENSSSCG00065044733	UniProtKB/TrEMBL
	ENSSSCG00070009254	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000031565	ENTREZGENE
	ENSSSCT00000031565.4	UniProtKB/TrEMBL
	ENSSSCT00025060657.1	UniProtKB/TrEMBL
	ENSSSCT00030037605.1	UniProtKB/TrEMBL
	ENSSSCT00035066067.1	UniProtKB/TrEMBL
	ENSSSCT00040105417.1	UniProtKB/TrEMBL
	ENSSSCT00045054286.1	UniProtKB/TrEMBL
	ENSSSCT00050092833.1	UniProtKB/TrEMBL
	ENSSSCT00055014315.1	UniProtKB/TrEMBL
	ENSSSCT00060035911.1	UniProtKB/TrEMBL
	ENSSSCT00065061197.1	UniProtKB/TrEMBL
	ENSSSCT00070017985.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.920	UniProtKB/TrEMBL
	3.40.50.970	UniProtKB/TrEMBL
InterPro	THDP-binding	UniProtKB/TrEMBL
	Transketo_C/PFOR_II	UniProtKB/TrEMBL
	Transketolase-like_Pyr-bd	UniProtKB/TrEMBL
	Transketolase_BS	UniProtKB/TrEMBL
	Transketolase_C	UniProtKB/TrEMBL
	Transketolase_N	UniProtKB/TrEMBL
NCBI Gene	TKTL1	ENTREZGENE
PANTHER	TRANSKETOLASE	UniProtKB/TrEMBL
	TRANSKETOLASE-LIKE PROTEIN 1	UniProtKB/TrEMBL
Pfam	Transket_pyr	UniProtKB/TrEMBL
	Transketolase_C	UniProtKB/TrEMBL
	Transketolase_N	UniProtKB/TrEMBL
PROSITE	TRANSKETOLASE_2	UniProtKB/TrEMBL
SMART	Transket_pyr	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52518	UniProtKB/TrEMBL
	SSF52922	UniProtKB/TrEMBL
UniProt	A0A4X1TES9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1G542	ENTREZGENE, UniProtKB/TrEMBL
	I3L954	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:94009	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar