TRIM44 (tripartite motif containing 44)

Gene: TRIM44 (tripartite motif containing 44) Sus scrofa

Analyze

Symbol:

TRIM44

Name:

tripartite motif containing 44

RGD ID:

13928618

Description:

ENCODES a protein that exhibits ubiquitin protein ligase activity (inferred); zinc ion binding (inferred); INVOLVED IN response to angiotensin (ortholog); ASSOCIATED WITH aniridia (ortholog); Aniridia 3 (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tripartite motif-containing protein 44

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	25,276,859 - 25,378,448 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	25,275,193 - 25,378,738 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	27,638,106 - 27,737,932 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

aniridia (ISO)

Aniridia 3 (ISO)

Cardiomegaly (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of protein K48-linked ubiquitination (IEA)

positive regulation of cytokine-mediated signaling pathway (IEA)

positive regulation of defense response to virus by host (IEA)

positive regulation of DNA-templated transcription (IEA)

positive regulation of non-canonical NF-kappaB signal transduction (IEA)

protein stabilization (IEA)

protein ubiquitination (IEA)

regulation of gene expression (IEA)

response to angiotensin (ISO)

Cellular Component

cytoplasm (IEA,ISO)

Molecular Function

protein binding (ISO)

ubiquitin protein ligase activity (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074

Genomics

Comparative Map Data

TRIM44
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	25,276,859 - 25,378,448 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	25,275,193 - 25,378,738 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	27,638,106 - 27,737,932 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRIM44
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	35,662,775 - 35,818,007 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	35,662,775 - 35,818,007 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	35,684,323 - 35,839,557 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	35,640,929 - 35,786,351 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	35,640,928 - 35,786,333	NCBI
Celera	11	35,831,618 - 35,978,179 (+)	NCBI		Celera
Cytogenetic Map	11	p13	NCBI
HuRef	11	35,382,982 - 35,529,605 (+)	NCBI		HuRef
CHM1_1	11	35,682,770 - 35,829,354 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	35,801,539 - 35,956,748 (+)	NCBI		T2T-CHM13v2.0

Trim44
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	102,130,464 - 102,231,541 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	102,130,464 - 102,238,173 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	102,300,119 - 102,400,900 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	102,300,119 - 102,407,828 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	102,140,276 - 102,241,057 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	102,100,958 - 102,201,739 (-)	NCBI		MGSCv36	mm8
Celera	2	103,537,119 - 103,637,729 (-)	NCBI		Celera
Cytogenetic Map	2	E2	NCBI
cM Map	2	54.13	NCBI

Trim44
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	109,048,643 - 109,183,821 (-)	NCBI		GRCr8
mRatBN7.2	3	88,593,619 - 88,729,085 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	88,592,719 - 88,729,188 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	92,174,688 - 92,232,227 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	100,773,706 - 100,831,243 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	98,593,249 - 98,650,810 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	91,968,781 - 92,242,138 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	92,183,556 - 92,242,318 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	98,626,537 - 98,894,480 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	87,458,183 - 87,594,329 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	87,354,610 - 87,490,757 (-)	NCBI
Celera	3	87,703,331 - 87,822,337 (-)	NCBI		Celera
Cytogenetic Map	3	q32	NCBI

Trim44
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	10,580,002 - 10,690,349 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	10,580,002 - 10,690,349 (-)	NCBI	ChiLan1.0	ChiLan1.0

TRIM44
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	37,881,633 - 38,111,341 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	37,886,297 - 38,116,016 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	35,633,985 - 35,782,260 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	35,508,589 - 35,656,684 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	35,508,083 - 35,656,684 (+)	Ensembl	panpan1.1		panPan2

TRIM44
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	32,242,830 - 32,351,540 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	32,247,146 - 32,351,648 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	31,849,489 - 31,958,122 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	32,853,137 - 32,961,804 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	32,853,874 - 32,962,301 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	32,414,167 - 32,522,742 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	31,999,405 - 32,108,058 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	32,644,829 - 32,753,492 (-)	NCBI		UU_Cfam_GSD_1.0

Trim44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	29,315,842 - 29,424,036 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936533	2,437,641 - 2,548,837 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936533	2,440,241 - 2,548,831 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIM44
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	29,461,928 - 29,592,084 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	29,464,090 - 29,592,270 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	126,584,251 - 126,719,217 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trim44
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	11,378,172 - 11,550,337 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	11,373,992 - 11,550,622 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TRIM44
2882 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	2	1	3	3		23		3
Low	8	3		2	2		2		3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003122865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005660994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK349149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK395796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU464002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBZA01000685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01079647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000014520 ⟹ ENSSSCP00000014127

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	25,276,406 - 25,378,565 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000045333 ⟹ ENSSSCP00000039803

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	25,276,859 - 25,378,448 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000082635 ⟹ ENSSSCP00000063648

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	25,247,527 - 25,378,351 (-)	Ensembl

RefSeq Acc Id:

XM_003122865 ⟹ XP_003122913

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	25,275,193 - 25,378,738 (-)	NCBI

Sequence:

show sequence

TAAAAGGGGGCCTCCTGACGCTGAGAGGGAAAGTGGAACCGGGGCGGCGCGAGGGCCCATCGTG
CCGTGTTCTCGCCAGGGCAGCGGGGAGGGCGAGCGGGCGGCGTGGCGCAGGGGCCGACGGGGGC
GCGGGACGGCCGCGCCGGAAGTGCCCCGGCAGCTGCAGGAAGCTCAGAGGGTGCCTAGCCGTGG
AGCCGGCGAGAAGGCGGGGTGTGTGCTCCTGGGCCTGGCGGGGGCTGTAGGAGTAGGTGGCAGC
GGGGCTGTGGAACGCGGTGCGGCAGCTGCCCGGGACGGCTCCCGGGTGGGGAGGAAGACGCAAG
GAGGCCGCGCCGAGGCCAGGCGGCCAGCTCGGTGGGCTTGAGCCCCGGGCCGCTGCACGGCCCC
CACATGGCCTCCGGAGGGGGCGCGGCCTTCGAGGAGCTGCCGCACGATGGCACGTGTGATGAGT
GCGAGCCCGACGAGGCTCCGGGGGCCGAGGAAGTGTGCCGAGAATGTGGCTTCTGCTACTGCCA
CCGTCATGCGGAGGTGCACGGGCAGAAGTTCCCCCGGCACCACCTGGCCGAGTACGTCCACGGT
GCTCACCAGGCCTGGGCCTCGGGACCTCAAGGGGGCGGCACAGGGGAGGAAGAAGTCGAGGCCC
AGGTGGAGAAGGAGAAGGCCCTAGAAAGCGAGGCAGGGGAAGAGAGCGAGTCTGAGGAAGACAG
TGAGTCCGAAGAAGAGAGCGAGACGGAGGAAGAGAGTGAGGATGAGAGCGAGGAAGAGAGTGAG
GAGGACAGTGAGGAGGAAATGGAGGATGAGCAAGAGAGTGAAGCAGAGGAAGACAACCAAGAAG
GAGAATCAGAGGCAGAGGGAGAAACTGAGGCAGAAAGCGAATTTGATCCGGAAATAGAAATGGA
AGCAGAGCGAGTGGCCAAGAGGAAGTGTCTGGACCATGGGCTCGATTTGAGTACCTATTGCCAG
GAAGATAAGCAGCTCATCTGTGTCCTGTGCCCAGTCATTGGGGCTCACCAGGGTCATCAGCTTT
CCACCCTAGATGAAGCCTTCGAAGAACTAAGAAGCAAAGACTCAGGCGGATTGAAGGCAGCCAT
GATAGAGTTGGTGGAAAGGTTAAAGTTCAAGAGCTCAGACCCTAAAGTAACCCGGGACCAGATG
AAGGTGTTTATACAGCAGGAATTTAAGAAAGTTCAAAAAGTGATTGCTGATGAGGAGCAGAAGA
CCCTTCATCTGGTGGACATCCAGGAAGCAATGGCCACAGCCCATGTGACTGAGATCCTGGCAGA
TATCCAATCCCATATGGATAGGTTGATGACTCAGATGGCCCAAGCCAAGGAACAACTTGATACC
TCTAATGAATCAGCTGAGCCAAAGGCAGAGGGCGACGAGGAAGGACCCAGTGGTGCCAGTGAAG
AAGAAGAGGACACATGAAGGCCTGCCATCCCCGGTGGAAAATCATCCCTTCCCCTTGTGTGTAT
GTGACAGCGTGTATGTAACAGCTTCTCACTCCTGTGAAAACTGCCCAGCAACAAACGTACTTCT
ACCAGATACGTCCCCAGATCCACAGCAAGCAAATAGCTCTCCAAGGGATGACCAGTTTTACTGT
TACTGACTGTGCCTCTCATTCTCTTACCGTGGTAGGTCAAGGAAAGGTGCGCCTTTGATCAGTT
AGGACCAGTTAAACAGTCCTTCAGGTGATCCCTCCATGGCTGCTTTGAACTTACTCAGGAAAGC
CAGCCCTTGTAATATTGTATACCCAAACAGCATCACTTCATTAGGAAGGATCTGGCATAATCTC
GAAGGGCAGTCAAAATTTGTTTCCCTACCTGCTAATAAAACCCCACTTCATTATTATTGAGGCA
TGAAATAAATGAGGGGAAAGTAGGGCCCAATCAACCCACGTAGTTAGTCTCTAAAATTCCAGTA
TGCATCTGTGAAAATGTAGTTTCATGAAATAAGATGGATGGCTTGAAAACAGAGAAAGAGTTAA
AAGTTAGAAATATAGAGAGATATTTTTAGTACATGAGGTTATCCAGGACTTCAGATTCATAATT
CAGTGCTGTGGAAGTGAAAAGAAAAAAAAAAAAAAAGATTGAAGAAGTAGGAAGGAAATGACTT
TTAAAAAAAAGGGACCAAAGAGATTTGATTAAAAGTTGACATTGAAATCAGTATTTCTGAACTC
AAATTGCCTGAGTTCCAAAGGGGTCACTAAAGGATCTGATGGAACCTGAATTATTTGGGTGGAT
TCTGAGGTTTTATGGGTCTTGTCACAACATAAAAGGCTGAAATGTGTGCTACCAAACGGGAATT
TTCAGTGTAGGTTTTGCTCCTGCTCTCCTAGCTTAGCCTAATTTGGCTTAAACTCAGCGTGGGG
AGAATCCCTGGACTCCGTGGTGTGTTGATTGCACTGGCTCCCAGCAGGTACACCTTCCTGTTAC
TGCAGCGGGGACCTCTCCCGGTGCTCCCCGCCCACAGGCCTCCGGCTCACCTGCTGTGCCCTGG
CTCTCTCCCCTTAGAGACATGAGCAGAGACAGCCCGTGGCTGGACTCCAGCCTTTCCACACTCC
CAAATCACATTTCCTTAAAACCAAGTTTTTTACTCCCAAGTAAGCAGTGATGTGCTAGGGAACA
CAAAACTGCAGACTAAAAAATACATCTTCTGAAATATCAGTTTTACTTAAGAAATGGTTTGGAC
TTGGGGAGTAACATTATTTTTTTGATAAAACAAACACAATTGTATTGTGAAATAGCATGTTCAT
ACATATAAACAGTAAAGGTAAAATGGGAGGCTTCGCAGAGAATTTGTATTTGCAAGTGGGGCAC
GTGTTCCCCCTCCTCTGCCTGTAGTAGTATTTTGGTGTTCACTTCTGAGAAGTACAGTTGGAAC
CATATCCACGCAGCCTTAGGGTTTCTGCTGACTCAGGGCCTAGACTTCTAGTGCCTCTGAGGCA
GAACCAAAGAAGCCTGCATTGGGGGAAACTCTTCCTTTTCTGTCTGCCTGCCTGTGACCTGTGT
ACCTGTCACAAAGCTTTAGGCCCAACTGATGTGTGTGTGCAGGATGGTTTTAGGGATAAACCAT
ATTTACTGTAGGAATCCTATTTATATCACTGTTCAGTCCTGTGCATGCTATGAAATGATTATTT
CTTTGAGGCCAGGAAGCTATTAGGCATATATGCTTCTGTGTTAGGATTACCCTGGCTCACTAAA
TATGTCAGGATGCTGGGGCTGAGAGTAGTTTGGGCTGTTCAAAAAAAAAAAAGTATTTTTCACT
CAAACCAGAGACCAATAAATGGCTAAGACATTT

hide sequence

RefSeq Acc Id:

XM_005660994 ⟹ XP_005661051

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	25,284,475 - 25,378,738 (-)	NCBI

Sequence:

show sequence

TAAAAGGGGGCCTCCTGACGCTGAGAGGGAAAGTGGAACCGGGGCGGCGCGAGGGCCCATCGTG
CCGTGTTCTCGCCAGGGCAGCGGGGAGGGCGAGCGGGCGGCGTGGCGCAGGGGCCGACGGGGGC
GCGGGACGGCCGCGCCGGAAGTGCCCCGGCAGCTGCAGGAAGCTCAGAGGGTGCCTAGCCGTGG
AGCCGGCGAGAAGGCGGGGTGTGTGCTCCTGGGCCTGGCGGGGGCTGTAGGAGTAGGTGGCAGC
GGGGCTGTGGAACGCGGTGCGGCAGCTGCCCGGGACGGCTCCCGGGTGGGGAGGAAGACGCAAG
GAGGCCGCGCCGAGGCCAGGCGGCCAGCTCGGTGGGCTTGAGCCCCGGGCCGCTGCACGGCCCC
CACATGGCCTCCGGAGGGGGCGCGGCCTTCGAGGAGCTGCCGCACGATGGCACGTGTGATGAGT
GCGAGCCCGACGAGGCTCCGGGGGCCGAGGAAGTGTGCCGAGAATGTGGCTTCTGCTACTGCCA
CCGTCATGCGGAGGTGCACGGGCAGAAGTTCCCCCGGCACCACCTGGCCGAGTACGTCCACGGT
GCTCACCAGGCCTGGGCCTCGGGACCTCAAGGGGGCGGCACAGGGGAGGAAGAAGTCGAGGCCC
AGGTGGAGAAGGAGAAGGCCCTAGAAAGCGAGGCAGGGGAAGAGAGCGAGTCTGAGGAAGACAG
TGAGTCCGAAGAAGAGAGCGAGACGGAGGAAGAGAGTGAGGATGAGAGCGAGGAAGAGAGTGAG
GAGGACAGTGAGGAGGAAATGGAGGATGAGCAAGAGAGTGAAGCAGAGGAAGACAACCAAGAAG
GAGAATCAGAGGCAGAGGGAGAAACTGAGGCAGAAAGCGAATTTGATCCGGAAATAGAAATGGA
AGCAGAGCGAGTGGCCAAGAGGAAGTGTCTGGACCATGGGCTCGATTTGAGTACCTATTGCCAG
GAAGATAAGCAGCTCATCTGTGTCCTGTGCCCAGTCATTGGGGCTCACCAGGGTCATCAGCTTT
CCACCCTAGATGAAGCCTTCGAAGAACTAAGAAGCAAAGACTCAGGCGGATTGAAGGCAGCCAT
GATAGAGTTGGTGGAAAGGTTAAAGTTCAAGAGCTCAGACCCTAAAGTAACCCGGGACCAGATG
AAGGTGTTTATACAGCAGGAATTTAAGAAAGTTCAAAAAGTGATTGCTGATGAGGAGCAGAAGA
CCCTTCATCTGGTGGACATCCAGGAAGCAATGGCCACAGCCCATGTGACTGAGATCCTGGCAGA
TATCCAATCCCATATGGATAGGTTGATGACTCAGATGGCCCAAGCCAAGGAACAACTTGATACC
TCTAATGAATCAGCTGAGCCAAAGGCAGAGGGCGACGAGGAAGGACCCAGGATACAGCAGCTGA
AGCAACAGGAAATTTGAAGTTTAACATTTTATTAAATCTTATGTTGAAGATTTCTGTGGAAGGA
AACTGCTGGAGAGAGATTGGTTTTCCATTATTCACTTGCCAAGAAAAGATAAGGAAACTGGGTC
GGGTGGATTTCCTGAAGGTGCAGGAAGCAAAGAAGGAAAACCCTTGGGCTATTTTCTGCTTCTA
ACCCTCCGCTTCCTAGAGTTGCCTGGGCCCTAATAGAAGGCTTGGGAAGGTTCCTTTCAGCCCT
CACCACAGGAGGTCGTCAGTTCAGTGAAATCCAGCAGCAGTGGGGAAGAGAAGGGAGGTTGGGG
AAGGCCAATGAAAAGGGAAAGTGTACAGCCACCATGGTATTTTCCTCTTAAAGTTCAACAGGAA
ACCAAGTAATAACATAGAAGTTATTTCAGAGGAGAAGCACGTGCACACTCTCATCCCCACAGAT
ACTTCGAAACTGCCCCATGTTGACAAGTGTGTGGGGAAAATGGGCATTCTCTACCTGCATGAAT
AACGATTGTAAATCAAGACAAGATAACTTCTGGAGGGCAGTTTAACAACAATATATCAGCTACT
TTAAAAAATACTTATCCTTTGCTTGTTTGAGAAATATCTGATTCTAGGACTGGGGCAGGAAATA
TATAGGATGAGCCTGGGGCATTTTGTAGTGCCAGGAAGTAAGGAGGTCCTCCCAACAAAACTCA
GAACACAGCTTACATTGATGAGGGTATGTCAGGGGCCATCAAGAGTGAACTAAGAGAGCTCTCA
AAGGCCAAAGCTGAACAATTTGAGCAATGAAATCAATTAAGTAGTATTGAATTATAACCCAGAG
TATAAAAATAAACATCCCTGAGTCCATACCAGTATAAATGAATGATCAAATAAATAAGTGAAGG
AGAAGAGACAAATTTCATGTTCAGAATTATTTCAGATAGTTTGTGTAGGTACTCTACCTTCAAC
CAGAAGGAGCATGACTCCTCATCCCCTAGGTCTGGTTGCTCATCATGACTTCTTTCCAAAGGGT
ACAGTATATAGAGGGGCAAAAAAGAGTAACTTTACGGTGGATAATCCTTAACAGATACTACCCC
AGCCAGGTGATCAAGGTCAGGTCATATTCATAGCATGTGCCCTTAGTACAGTGTGAAGATGGTG
CTTTACCTCTAAAGTGTTTACTTCTCAAGGCCCGTAACCATGGCCTAATCATGCAAAAAGCATC
TGACGAATCCCAAATGAAAGATATTCTACAAAATACCTGGCCATTGCTCCTCAAAACTGTCAAG
GAAGGTCATCAAAAATATGAAAATCTAAGAGACTGTCGTAGCCAAGAAGAGCCTAAGGAGACCT
GATGACTAAGTATAAGGTGGTATCATGGGCGAAATCTGAAACAGAAGAAGGACATTGGGGAAAA
AACTAAGACAATCTGAATAAAACACAGACTTGAATTAATACTGGTGTACCAATACTGATTCATT
GTAACAAATTCAGTACCCTAGTGTAAGGCGGTAAAGTAAAGAAACTGCATATTAGAACCCTCTG
TACTATCTTTGTTATTTTCCCTCCTCGGAAATAATTAAGGATGAACATGGATGTGTGTCACAGA
GGAGTAGGTAATAGTGAAAAGGCAGAAATAATTTAAATGTCCAGCATTAGGTATGGTAAATCCA
TACAACTTAGTCATGAATCTTAATCTTACAGAAATCTATTTCTTGATTGAGAAAAGTATTCATG
ATTGATAGTTGGGTGGAAAAAAAAGAAGTGGATTATGAAAGAATATACCTGTGAGGTATATTCA
ACTGTACCCCTCCTATGCATGTATATTTTTGCATATGCACAGAAGGGATATAAATGAGTGTATT
TCAGTGTGTTAATGGTGATTCTCACCAGGGATAACACTATGGATTTTTTCTTTTTATAGAAGTA
ATACTTGTTTGTTATCAAAAGTACAGATCAGTAAAAGAAGAAAAAGTTACTTTATGAATTTAAA
AAAAAAAAGGACTGGGAATGATTCCATTATAAATTCAGCAGCAGCAGTAACAGAAGACTCAGTC
TTATGAAGGAGTTCTGAGAGCAGATGGAATACTGGCAGCTAACAAGCCTGCCTGTTACTTCTGT
TCAAGTGTCTCCATCCTCCATAGAAACAGGCCACCACCCAGCCCCTGTGGACTCTCGCACTCCA
CCTGTAAAAGCAGTGAACAGGCTGCAAGGTGCATGGAGATCAAACTTAGCGTTTAGTGGTCACT
GTGGGGACCTGTGGCTGCCCTGAAGCCCCCAGGCTCTCTCAGAGCTGCCTACATAGATCTGTGG
TGATGTAGGCAGCTGTGAGGGTGGAGAGACAAACCCAGTGTCTGTTTCCTTCTCCTTCTATAGT
AATCCTACCTTTATCTTGCTTTTTTTTTTTTTGCTGTTTCTTTGGGCCGCTCCCACAGCATATG
GAGGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_003122913	(Get FASTA)	NCBI Sequence Viewer
	XP_005661051	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000039803
	ENSSSCP00000039803.2
	ENSSSCP00015025382.1
	ENSSSCP00025030578.1
	ENSSSCP00030012405.1
	ENSSSCP00035036600.1
	ENSSSCP00040012700.1
	ENSSSCP00045035410.1
	ENSSSCP00050021674.1
	ENSSSCP00060031276.1
	ENSSSCP00065023012.1
	ENSSSCP00070002555.1
GenBank Protein	JAG69083	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_003122913 ⟸ XM_003122865
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1TEN6 (UniProtKB/TrEMBL), A0A287A748 (UniProtKB/TrEMBL), A0A4X1SJE7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASGGGAAFEELPHDGTCDECEPDEAPGAEEVCRECGFCYCHRHAEVHGQKFPRHHLAEYVHGA HQAWASGPQGGGTGEEEVEAQVEKEKALESEAGEESESEEDSESEEESETEEESEDESEEESEE DSEEEMEDEQESEAEEDNQEGESEAEGETEAESEFDPEIEMEAERVAKRKCLDHGLDLSTYCQE DKQLICVLCPVIGAHQGHQLSTLDEAFEELRSKDSGGLKAAMIELVERLKFKSSDPKVTRDQMK VFIQQEFKKVQKVIADEEQKTLHLVDIQEAMATAHVTEILADIQSHMDRLMTQMAQAKEQLDTS NESAEPKAEGDEEGPSGASEEEEDT hide sequence

RefSeq Acc Id:	XP_005661051 ⟸ XM_005660994
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0NWI2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASGGGAAFEELPHDGTCDECEPDEAPGAEEVCRECGFCYCHRHAEVHGQKFPRHHLAEYVHGA HQAWASGPQGGGTGEEEVEAQVEKEKALESEAGEESESEEDSESEEESETEEESEDESEEESEE DSEEEMEDEQESEAEEDNQEGESEAEGETEAESEFDPEIEMEAERVAKRKCLDHGLDLSTYCQE DKQLICVLCPVIGAHQGHQLSTLDEAFEELRSKDSGGLKAAMIELVERLKFKSSDPKVTRDQMK VFIQQEFKKVQKVIADEEQKTLHLVDIQEAMATAHVTEILADIQSHMDRLMTQMAQAKEQLDTS NESAEPKAEGDEEGPRIQQLKQQEI hide sequence

RefSeq Acc Id:

ENSSSCP00000039803 ⟸ ENSSSCT00000045333

RefSeq Acc Id:

ENSSSCP00000014127 ⟸ ENSSSCT00000014520

RefSeq Acc Id:

ENSSSCP00000063648 ⟸ ENSSSCT00000082635

Protein Domains

B box-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013295	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015047260	UniProtKB/TrEMBL
	ENSSSCG00025051677	UniProtKB/TrEMBL
	ENSSSCG00030020128	UniProtKB/TrEMBL
	ENSSSCG00035065103	UniProtKB/TrEMBL
	ENSSSCG00040022688	UniProtKB/TrEMBL
	ENSSSCG00045029848	UniProtKB/TrEMBL
	ENSSSCG00050038271	UniProtKB/TrEMBL
	ENSSSCG00060053235	UniProtKB/TrEMBL
	ENSSSCG00065038753	UniProtKB/TrEMBL
	ENSSSCG00070001663	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000045333	ENTREZGENE
	ENSSSCT00000045333.3	UniProtKB/TrEMBL
	ENSSSCT00015063315.1	UniProtKB/TrEMBL
	ENSSSCT00025070754.1	UniProtKB/TrEMBL
	ENSSSCT00030027788.1	UniProtKB/TrEMBL
	ENSSSCT00035087662.1	UniProtKB/TrEMBL
	ENSSSCT00040030412.1	UniProtKB/TrEMBL
	ENSSSCT00045050891.1	UniProtKB/TrEMBL
	ENSSSCT00050051613.1	UniProtKB/TrEMBL
	ENSSSCT00060072482.1	UniProtKB/TrEMBL
	ENSSSCT00065052958.1	UniProtKB/TrEMBL
	ENSSSCT00070003098.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Znf_B-box	UniProtKB/TrEMBL
KEGG Report	ssc:100524974	UniProtKB/TrEMBL
NCBI Gene	TRIM44	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE TRIM	UniProtKB/TrEMBL
	TRIPARTITE MOTIF-CONTAINING PROTEIN 44	UniProtKB/TrEMBL
Pfam	zf-B_box	UniProtKB/TrEMBL
PROSITE	ZF_BBOX	UniProtKB/TrEMBL
SMART	BBOX	UniProtKB/TrEMBL
Superfamily-SCOP	B-box zinc-binding domain	UniProtKB/TrEMBL
UniProt	A0A287A748	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SJE7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0NWI2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1TEN6	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:94416	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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