NXPE3 (neurexophilin and PC-esterase domain family member 3) - Rat Genome Database

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Gene: NXPE3 (neurexophilin and PC-esterase domain family member 3) Sus scrofa
Analyze
Symbol: NXPE3
Name: neurexophilin and PC-esterase domain family member 3
RGD ID: 13922515
Description: INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NXPE family member 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13157,295,745 - 157,337,888 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113157,298,831 - 157,337,904 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213166,780,905 - 166,819,964 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
NXPE3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13157,295,745 - 157,337,888 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113157,298,831 - 157,337,904 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213166,780,905 - 166,819,964 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NXPE3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383101,779,211 - 101,828,231 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3101,779,177 - 101,843,743 (+)EnsemblGRCh38hg38GRCh38
GRCh373101,498,055 - 101,547,075 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363102,980,764 - 103,025,150 (+)NCBINCBI36Build 36hg18NCBI36
Build 343102,980,763 - 103,025,141NCBI
Celera399,891,428 - 99,940,459 (+)NCBICelera
Cytogenetic Map3q12.3NCBI
HuRef398,866,721 - 98,915,769 (+)NCBIHuRef
CHM1_13101,461,310 - 101,510,345 (+)NCBICHM1_1
T2T-CHM13v2.03104,492,001 - 104,541,024 (+)NCBIT2T-CHM13v2.0
Nxpe3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391655,660,316 - 55,717,467 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1655,660,316 - 55,715,648 (-)EnsemblGRCm39 Ensembl
GRCm381655,839,953 - 55,897,104 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1655,839,953 - 55,895,285 (-)EnsemblGRCm38mm10GRCm38
MGSCv371655,840,066 - 55,895,398 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361655,768,132 - 55,820,343 (-)NCBIMGSCv36mm8
Celera1656,155,440 - 56,210,680 (-)NCBICelera
Cytogenetic Map16C1.1NCBI
cM Map1633.65NCBI
Nxpe3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81158,195,951 - 58,246,739 (+)NCBIGRCr8
mRatBN7.21144,726,905 - 44,777,694 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1144,727,069 - 44,777,694 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1153,503,293 - 53,554,204 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01146,164,928 - 46,215,850 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01145,289,082 - 45,339,993 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01147,188,332 - 47,238,372 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1147,188,495 - 47,238,372 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01150,366,176 - 50,415,914 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41145,714,387 - 45,770,951 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1144,479,657 - 44,529,454 (+)NCBICelera
Cytogenetic Map11q12NCBI
Nxpe3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554273,256,236 - 3,320,525 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554273,256,305 - 3,320,525 (+)NCBIChiLan1.0ChiLan1.0
NXPE3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2299,717,786 - 99,765,171 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1399,722,564 - 99,769,954 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0398,867,439 - 98,914,807 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13105,547,763 - 105,595,420 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3105,547,811 - 105,590,218 (+)Ensemblpanpan1.1panPan2
NXPE3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1338,073,254 - 8,120,253 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl338,073,840 - 8,154,561 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha338,227,941 - 8,274,816 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0338,212,543 - 8,258,753 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl338,212,452 - 8,261,977 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1338,100,129 - 8,147,297 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0338,146,789 - 8,193,617 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0338,486,972 - 8,534,043 (+)NCBIUU_Cfam_GSD_1.0
Nxpe3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602148,739,299 - 148,784,869 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366301,634,405 - 1,690,387 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366301,637,120 - 1,690,470 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NXPE3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12279,082,196 - 79,122,619 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2279,083,084 - 79,119,772 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604187,430,462 - 87,474,878 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nxpe3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478915,536,250 - 15,586,853 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478915,536,080 - 15,586,853 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NXPE3
944 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 1 3 12
Low 10 2 2 2 2 11 2 3 3
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000013076   ⟹   ENSSSCP00000012731
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13157,298,819 - 157,320,977 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000048094   ⟹   ENSSSCP00000049671
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13157,295,745 - 157,337,888 (-)Ensembl
RefSeq Acc Id: XM_003132693   ⟹   XP_003132741
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113157,298,831 - 157,337,904 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013990159   ⟹   XP_013845613
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113157,298,831 - 157,337,754 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013990160   ⟹   XP_013845614
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113157,298,831 - 157,337,861 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_003132741   ⟸   XM_003132693
- UniProtKB: A0A4X1SHH8 (UniProtKB/TrEMBL),   A0A287B0I8 (UniProtKB/TrEMBL),   A0A480LFG9 (UniProtKB/TrEMBL),   A0A8D1MV87 (UniProtKB/TrEMBL),   A0A8D1E0I2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013845614   ⟸   XM_013990160
- UniProtKB: A0A4X1SHH8 (UniProtKB/TrEMBL),   A0A287B0I8 (UniProtKB/TrEMBL),   A0A480LFG9 (UniProtKB/TrEMBL),   A0A8D1MV87 (UniProtKB/TrEMBL),   A0A8D1E0I2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013845613   ⟸   XM_013990159
- UniProtKB: A0A4X1SHH8 (UniProtKB/TrEMBL),   A0A287B0I8 (UniProtKB/TrEMBL),   A0A480LFG9 (UniProtKB/TrEMBL),   A0A8D1MV87 (UniProtKB/TrEMBL),   A0A8D1E0I2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000012731   ⟸   ENSSSCT00000013076
RefSeq Acc Id: ENSSSCP00000049671   ⟸   ENSSSCT00000048094


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000011950 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005029219 UniProtKB/TrEMBL
  ENSSSCG00015063833 UniProtKB/TrEMBL
  ENSSSCG00025044382 UniProtKB/TrEMBL
  ENSSSCG00030039120 UniProtKB/TrEMBL
  ENSSSCG00035032353 UniProtKB/TrEMBL
  ENSSSCG00040027504 UniProtKB/TrEMBL
  ENSSSCG00045002188 UniProtKB/TrEMBL
  ENSSSCG00050047989 UniProtKB/TrEMBL
  ENSSSCG00055024546 UniProtKB/TrEMBL
  ENSSSCG00060030767 UniProtKB/TrEMBL
  ENSSSCG00065074533 UniProtKB/TrEMBL
  ENSSSCG00070000778 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013076.5 UniProtKB/TrEMBL
  ENSSSCT00000048094 ENTREZGENE
  ENSSSCT00000048094.3 UniProtKB/TrEMBL
  ENSSSCT00005046572.1 UniProtKB/TrEMBL
  ENSSSCT00005046591.1 UniProtKB/TrEMBL
  ENSSSCT00005046604.1 UniProtKB/TrEMBL
  ENSSSCT00015085429.1 UniProtKB/TrEMBL
  ENSSSCT00025060513.1 UniProtKB/TrEMBL
  ENSSSCT00030054488.1 UniProtKB/TrEMBL
  ENSSSCT00035042847.1 UniProtKB/TrEMBL
  ENSSSCT00040037373.1 UniProtKB/TrEMBL
  ENSSSCT00040037410.1 UniProtKB/TrEMBL
  ENSSSCT00040037454.1 UniProtKB/TrEMBL
  ENSSSCT00045003440.1 UniProtKB/TrEMBL
  ENSSSCT00050065382.1 UniProtKB/TrEMBL
  ENSSSCT00055048498.1 UniProtKB/TrEMBL
  ENSSSCT00060041604.1 UniProtKB/TrEMBL
  ENSSSCT00065102674.1 UniProtKB/TrEMBL
  ENSSSCT00070001500.1 UniProtKB/TrEMBL
  ENSSSCT00070001505.1 UniProtKB/TrEMBL
InterPro Ig_E-set UniProtKB/TrEMBL
  NXPH/NXPE UniProtKB/TrEMBL
KEGG Report ssc:100520806 UniProtKB/TrEMBL
NCBI Gene NXPE3 ENTREZGENE
PANTHER NXPE FAMILY MEMBER UniProtKB/TrEMBL
  NXPE FAMILY MEMBER 3 UniProtKB/TrEMBL
Pfam Neurexophilin UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/TrEMBL
UniProt A0A287B0I8 ENTREZGENE
  A0A480LFG9 ENTREZGENE
  A0A4X1SHH8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1E0I2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1MV87 ENTREZGENE, UniProtKB/TrEMBL
  F1SL20_PIG UniProtKB/TrEMBL
UniProt Secondary A0A287B0I8 UniProtKB/TrEMBL
  A0A480LFG9 UniProtKB/TrEMBL
VGNC ID VGNC:90997 ENTREZGENE