Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | autism spectrum disorder | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:35663546 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | autism spectrum disorder | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:35663546 | |
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# | Reference Title | Reference Citation |
1. | GOAs Human GO annotations | GOA_HUMAN data from the GO Consortium |
2. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
3. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:1433500 | PMID:8419650 | PMID:8619474 | PMID:9110174 | PMID:9478973 | PMID:10464296 | PMID:12080076 | PMID:12477932 | PMID:15489334 | PMID:16344560 | PMID:19470764 | PMID:20950796 |
PMID:21828042 | PMID:21873635 | PMID:21988832 | PMID:22020094 | PMID:22268729 | PMID:22801424 | PMID:22990118 | PMID:23269668 | PMID:26186194 | PMID:28514442 | PMID:30021884 | PMID:32149355 |
PMID:33961781 |
CHST10 (Homo sapiens - human) |
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Chst10 (Mus musculus - house mouse) |
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Chst10 (Rattus norvegicus - Norway rat) |
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Chst10 (Chinchilla lanigera - long-tailed chinchilla) |
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CHST10 (Pan paniscus - bonobo/pygmy chimpanzee) |
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CHST10 (Canis lupus familiaris - dog) |
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Chst10 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CHST10 (Sus scrofa - pig) |
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CHST10 (Chlorocebus sabaeus - green monkey) |
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Chst10 (Heterocephalus glaber - naked mole-rat) |
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Variants in CHST10
22 total Variants |
Name | Type | Condition(s) | Position(s) | Clinical significance |
NM_004854.4(CHST10):c.-33+81A>G | single nucleotide variant | Lung cancer [RCV000091072] | Chr2:100414960 [GRCh38] Chr2:101031422 [GRCh37] Chr2:2q11.2 |
uncertain significance |
GRCh38/hg38 2q11.2-12.3(chr2:100378510-108472871)x3 | copy number gain | See cases [RCV000050836] | Chr2:100378510..108472871 [GRCh38] Chr2:100994972..109089327 [GRCh37] Chr2:100361404..108455759 [NCBI36] Chr2:2q11.2-12.3 |
pathogenic |
GRCh38/hg38 2q11.1-12.1(chr2:94817406-103252396)x3 | copy number gain | See cases [RCV000052946] | Chr2:94817406..103252396 [GRCh38] Chr2:95618109..103868854 [GRCh37] Chr2:94846878..103235286 [NCBI36] Chr2:2q11.1-12.1 |
pathogenic |
GRCh38/hg38 2q11.2-13(chr2:97672522-110211318)x3 | copy number gain | See cases [RCV000052947] | Chr2:97672522..110211318 [GRCh38] Chr2:98288985..110968895 [GRCh37] Chr2:97655417..110326184 [NCBI36] Chr2:2q11.2-13 |
pathogenic |
GRCh38/hg38 2p11.2-q11.2(chr2:91443218-102334856)x3 | copy number gain | See cases [RCV000052945] | Chr2:91443218..102334856 [GRCh38] Chr2:91617683..102951316 [GRCh37] Chr2:90981410..102317748 [NCBI36] Chr2:2p11.2-q11.2 |
pathogenic |
GRCh38/hg38 2q11.2(chr2:98787057-100785053)x1 | copy number loss | See cases [RCV000054057] | Chr2:98787057..100785053 [GRCh38] Chr2:99403520..101401515 [GRCh37] Chr2:98769952..100767947 [NCBI36] Chr2:2q11.2 |
pathogenic |
GRCh38/hg38 2q11.2(chr2:99253497-101559639)x3 | copy number gain | See cases [RCV000136916] | Chr2:99253497..101559639 [GRCh38] Chr2:99869960..102176101 [GRCh37] Chr2:99236392..101542533 [NCBI36] Chr2:2q11.2 |
uncertain significance |
GRCh38/hg38 2q11.2(chr2:100404604-100908738)x3 | copy number gain | See cases [RCV000139353] | Chr2:100404604..100908738 [GRCh38] Chr2:101021066..101525200 [GRCh37] Chr2:100387498..100891632 [NCBI36] Chr2:2q11.2 |
likely benign |
GRCh38/hg38 2q11.2(chr2:98411773-101636907)x1 | copy number loss | See cases [RCV000139206] | Chr2:98411773..101636907 [GRCh38] Chr2:99028236..102253369 [GRCh37] Chr2:98394668..101619801 [NCBI36] Chr2:2q11.2 |
likely pathogenic |
GRCh38/hg38 2q11.1-13(chr2:94678532-110602409)x3 | copy number gain | See cases [RCV000141075] | Chr2:94678532..110602409 [GRCh38] Chr2:95344257..111359986 [GRCh37] Chr2:94707984..111076455 [NCBI36] Chr2:2q11.1-13 |
pathogenic |
GRCh38/hg38 2q11.2(chr2:100406992-100919730)x3 | copy number gain | See cases [RCV000143677] | Chr2:100406992..100919730 [GRCh38] Chr2:101023454..101536192 [GRCh37] Chr2:100389886..100902624 [NCBI36] Chr2:2q11.2 |
uncertain significance |
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 | copy number gain | not provided [RCV000752802] | Chr2:14238..243048760 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2q11.1-12.3(chr2:95529039-108518266) | copy number gain | See cases [RCV000449270] | Chr2:95529039..108518266 [GRCh37] Chr2:2q11.1-12.3 |
pathogenic |
GRCh37/hg19 2q11.1-13(chr2:95327499-111370025)x4 | copy number gain | See cases [RCV000446842] | Chr2:95327499..111370025 [GRCh37] Chr2:2q11.1-13 |
pathogenic |
GRCh37/hg19 2q11.2(chr2:100890121-101188008)x3 | copy number gain | See cases [RCV000445655] | Chr2:100890121..101188008 [GRCh37] Chr2:2q11.2 |
uncertain significance |
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) | copy number gain | See cases [RCV000512056] | Chr2:12771..242783384 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2q11.1-12.2(chr2:95518497-107186127) | copy number gain | See cases [RCV000511158] | Chr2:95518497..107186127 [GRCh37] Chr2:2q11.1-12.2 |
uncertain significance |
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 | copy number gain | See cases [RCV000511212] | Chr2:12771..242783384 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2q11.2(chr2:101022472-101536192)x3 | copy number gain | not provided [RCV000682080] | Chr2:101022472..101536192 [GRCh37] Chr2:2q11.2 |
likely benign|uncertain significance |
GRCh37/hg19 2q11.1-13(chr2:96353030-114045463)x3 | copy number gain | not provided [RCV000682168] | Chr2:96353030..114045463 [GRCh37] Chr2:2q11.1-13 |
pathogenic |
Single allele | deletion | not provided [RCV000714264] | Chr2:40608411..146900718 [GRCh37] Chr2:2p22.1-q22.3 |
likely pathogenic |
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 | copy number gain | not provided [RCV000752804] | Chr2:15672..243101834 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
NM_004854.5(CHST10):c.483G>C (p.Lys161Asn) | single nucleotide variant | not provided [RCV001355648] | Chr2:100395559 [GRCh38] Chr2:101012021 [GRCh37] Chr2:2q11.2 |
uncertain significance |
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) | copy number gain | Mosaic trisomy 2 [RCV002280628] | Chr2:1..243199373 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 | copy number loss | See cases [RCV002287563] | Chr2:11504318..111365996 [GRCh37] Chr2:2p25.1-q13 |
pathogenic |
NM_004854.5(CHST10):c.662T>C (p.Ile221Thr) | single nucleotide variant | Inborn genetic diseases [RCV002728087] | Chr2:100393654 [GRCh38] Chr2:101010116 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.557T>A (p.Phe186Tyr) | single nucleotide variant | Inborn genetic diseases [RCV002682356] | Chr2:100393759 [GRCh38] Chr2:101010221 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.410T>G (p.Val137Gly) | single nucleotide variant | Inborn genetic diseases [RCV002727991] | Chr2:100397925 [GRCh38] Chr2:101014387 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.901C>T (p.His301Tyr) | single nucleotide variant | Inborn genetic diseases [RCV002976843] | Chr2:100393415 [GRCh38] Chr2:101009877 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.106A>G (p.Ser36Gly) | single nucleotide variant | Inborn genetic diseases [RCV002981188] | Chr2:100402650 [GRCh38] Chr2:101019112 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.281A>G (p.Asp94Gly) | single nucleotide variant | Inborn genetic diseases [RCV002661364] | Chr2:100398054 [GRCh38] Chr2:101014516 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.998G>A (p.Arg333Gln) | single nucleotide variant | Inborn genetic diseases [RCV002980441] | Chr2:100393318 [GRCh38] Chr2:101009780 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.457G>A (p.Glu153Lys) | single nucleotide variant | Inborn genetic diseases [RCV002980592] | Chr2:100395585 [GRCh38] Chr2:101012047 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.310C>T (p.Pro104Ser) | single nucleotide variant | Inborn genetic diseases [RCV002787385] | Chr2:100398025 [GRCh38] Chr2:101014487 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.724C>T (p.Arg242Cys) | single nucleotide variant | Inborn genetic diseases [RCV002986338] | Chr2:100393592 [GRCh38] Chr2:101010054 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.298C>G (p.Leu100Val) | single nucleotide variant | Inborn genetic diseases [RCV002708610] | Chr2:100398037 [GRCh38] Chr2:101014499 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.568G>C (p.Asp190His) | single nucleotide variant | Inborn genetic diseases [RCV002984057] | Chr2:100393748 [GRCh38] Chr2:101010210 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.293A>G (p.Lys98Arg) | single nucleotide variant | Inborn genetic diseases [RCV002826291] | Chr2:100398042 [GRCh38] Chr2:101014504 [GRCh37] Chr2:2q11.2 |
likely benign |
NM_004854.5(CHST10):c.908T>C (p.Val303Ala) | single nucleotide variant | Inborn genetic diseases [RCV002984580] | Chr2:100393408 [GRCh38] Chr2:101009870 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.695C>T (p.Thr232Ile) | single nucleotide variant | Inborn genetic diseases [RCV003175879] | Chr2:100393621 [GRCh38] Chr2:101010083 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.134C>A (p.Thr45Lys) | single nucleotide variant | Inborn genetic diseases [RCV003208543] | Chr2:100402622 [GRCh38] Chr2:101019084 [GRCh37] Chr2:2q11.2 |
uncertain significance |
NM_004854.5(CHST10):c.989G>A (p.Arg330Gln) | single nucleotide variant | Inborn genetic diseases [RCV003364629] | Chr2:100393327 [GRCh38] Chr2:101009789 [GRCh37] Chr2:2q11.2 |
uncertain significance |
GRCh37/hg19 2q11.1-11.2(chr2:95773428-102550061)x3 | copy number gain | not provided [RCV003484069] | Chr2:95773428..102550061 [GRCh37] Chr2:2q11.1-11.2 |
likely pathogenic |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
A004V45 |
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D2S1711E |
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WI-21792 |
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WI-19927 |
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A005U12 |
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G20503 |
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STS-W80636 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | visual system | adipose tissue | appendage | entire extraembryonic component | pharyngeal arch | |
High | ||||||||||||||||||
Medium | 215 | 51 | 599 | 17 | 361 | 14 | 741 | 175 | 2831 | 71 | 643 | 583 | 5 | 1 | 456 | 1 | ||
Low | 2101 | 2626 | 880 | 360 | 1255 | 202 | 3607 | 2017 | 903 | 339 | 804 | 1013 | 168 | 1 | 1203 | 2331 | 4 | 2 |
Below cutoff | 40 | 313 | 241 | 241 | 320 | 241 | 6 | 4 | 7 | 5 | 7 | 1 |
RefSeq Acc Id: | ENST00000264249 ⟹ ENSP00000264249 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000409046 ⟹ ENSP00000387121 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000409701 ⟹ ENSP00000387309 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000418201 ⟹ ENSP00000416831 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000420858 ⟹ ENSP00000405922 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000421474 ⟹ ENSP00000407525 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000435960 ⟹ ENSP00000395643 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000448989 ⟹ ENSP00000387977 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000466583 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000484382 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000485085 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000487860 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_004854 ⟹ NP_004845 | ||||||||||||||||||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_011512207 ⟹ XP_011510509 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_011512208 ⟹ XP_011510510 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_011512210 ⟹ XP_011510512 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_011512211 ⟹ XP_011510513 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017005380 ⟹ XP_016860869 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017005381 ⟹ XP_016860870 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017005382 ⟹ XP_016860871 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017005383 ⟹ XP_016860872 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_024453248 ⟹ XP_024309016 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_047446433 ⟹ XP_047302389 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_047446434 ⟹ XP_047302390 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_047446436 ⟹ XP_047302392 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_047446437 ⟹ XP_047302393 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_047446438 ⟹ XP_047302394 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344644 ⟹ XP_054200619 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344645 ⟹ XP_054200620 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344646 ⟹ XP_054200621 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344647 ⟹ XP_054200622 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344648 ⟹ XP_054200623 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344649 ⟹ XP_054200624 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344650 ⟹ XP_054200625 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344651 ⟹ XP_054200626 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344652 ⟹ XP_054200627 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344653 ⟹ XP_054200628 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344654 ⟹ XP_054200629 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344655 ⟹ XP_054200630 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344656 ⟹ XP_054200631 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344657 ⟹ XP_054200632 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054344658 ⟹ XP_054200633 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NP_004845 ⟸ NM_004854 |
- Peptide Label: | precursor |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_011510512 ⟸ XM_011512210 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_011510509 ⟸ XM_011512207 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_011510513 ⟸ XM_011512211 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_011510510 ⟸ XM_011512208 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_016860870 ⟸ XM_017005381 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_016860869 ⟸ XM_017005380 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_016860872 ⟸ XM_017005383 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_016860871 ⟸ XM_017005382 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q53T18 (UniProtKB/Swiss-Prot), O43529 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_024309016 ⟸ XM_024453248 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot), B7Z4E8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSP00000416831 ⟸ ENST00000418201 |
RefSeq Acc Id: | ENSP00000387309 ⟸ ENST00000409701 |
RefSeq Acc Id: | ENSP00000387121 ⟸ ENST00000409046 |
RefSeq Acc Id: | ENSP00000387977 ⟸ ENST00000448989 |
RefSeq Acc Id: | ENSP00000405922 ⟸ ENST00000420858 |
RefSeq Acc Id: | ENSP00000407525 ⟸ ENST00000421474 |
RefSeq Acc Id: | ENSP00000264249 ⟸ ENST00000264249 |
RefSeq Acc Id: | ENSP00000395643 ⟸ ENST00000435960 |
RefSeq Acc Id: | XP_047302389 ⟸ XM_047446433 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_047302393 ⟸ XM_047446437 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_047302394 ⟸ XM_047446438 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_047302390 ⟸ XM_047446434 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_047302392 ⟸ XM_047446436 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200621 ⟸ XM_054344646 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200622 ⟸ XM_054344647 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200627 ⟸ XM_054344652 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200620 ⟸ XM_054344645 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200619 ⟸ XM_054344644 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200625 ⟸ XM_054344650 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200623 ⟸ XM_054344648 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200629 ⟸ XM_054344654 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200626 ⟸ XM_054344651 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200631 ⟸ XM_054344656 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200632 ⟸ XM_054344657 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200624 ⟸ XM_054344649 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200630 ⟸ XM_054344655 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200628 ⟸ XM_054344653 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_054200633 ⟸ XM_054344658 |
- Peptide Label: | isoform X1 |
- UniProtKB: | O43529 (UniProtKB/Swiss-Prot), Q53T18 (UniProtKB/Swiss-Prot) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-O43529-F1-model_v2 | AlphaFold | O43529 | 1-356 | view protein structure |
RGD ID: | 6797197 | ||||||||
Promoter ID: | HG_KWN:34124 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, HeLa_S3, K562, Lymphoblastoid, NB4 | ||||||||
Transcripts: | ENST00000264249, ENST00000409046, ENST00000409701, OTTHUMT00000329695, OTTHUMT00000329739, OTTHUMT00000329740, OTTHUMT00000329742, OTTHUMT00000329743, OTTHUMT00000329744, OTTHUMT00000329811, OTTHUMT00000329812 | ||||||||
Position: |
|
RGD ID: | 6861166 | ||||||||
Promoter ID: | EPDNEW_H3748 | ||||||||
Type: | initiation region | ||||||||
Name: | CHST10_1 | ||||||||
Description: | carbohydrate sulfotransferase 10 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | HGNC:19650 | AgrOrtholog |
COSMIC | CHST10 | COSMIC |
Ensembl Genes | ENSG00000115526 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENST00000264249 | ENTREZGENE |
ENST00000264249.8 | UniProtKB/Swiss-Prot | |
ENST00000409046.5 | UniProtKB/TrEMBL | |
ENST00000409701 | ENTREZGENE | |
ENST00000409701.5 | UniProtKB/Swiss-Prot | |
ENST00000418201.5 | UniProtKB/TrEMBL | |
ENST00000420858.5 | UniProtKB/TrEMBL | |
ENST00000421474.5 | UniProtKB/TrEMBL | |
ENST00000435960.5 | UniProtKB/TrEMBL | |
ENST00000448989.5 | UniProtKB/TrEMBL | |
GTEx | ENSG00000115526 | GTEx |
HGNC ID | HGNC:19650 | ENTREZGENE |
Human Proteome Map | CHST10 | Human Proteome Map |
InterPro | Carb_sulfotrans_8-10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Sulfotransferase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | hsa:9486 | UniProtKB/Swiss-Prot |
NCBI Gene | 9486 | ENTREZGENE |
OMIM | 606376 | OMIM |
PANTHER | CARBOHYDRATE SULFOTRANSFERASE 10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR12137 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Sulfotransfer_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PharmGKB | PA134920179 | PharmGKB |
UniProt | B7Z4E8 | ENTREZGENE, UniProtKB/TrEMBL |
B8ZZ48_HUMAN | UniProtKB/TrEMBL | |
C9J5X0_HUMAN | UniProtKB/TrEMBL | |
C9JCK7_HUMAN | UniProtKB/TrEMBL | |
C9JI33_HUMAN | UniProtKB/TrEMBL | |
C9JUE4_HUMAN | UniProtKB/TrEMBL | |
C9JWY0_HUMAN | UniProtKB/TrEMBL | |
CHSTA_HUMAN | UniProtKB/Swiss-Prot, ENTREZGENE | |
Q53T18 | ENTREZGENE | |
UniProt Secondary | Q53T18 | UniProtKB/Swiss-Prot |