CHST10 (carbohydrate sulfotransferase 10) - Rat Genome Database

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Gene: CHST10 (carbohydrate sulfotransferase 10) Homo sapiens
Analyze
Symbol: CHST10
Name: carbohydrate sulfotransferase 10
RGD ID: 1353236
HGNC Page HGNC:19650
Description: Enables sulfotransferase activity. Involved in androgen metabolic process and estrogen metabolic process. Predicted to be located in Golgi membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: HNK-1 sulfotransferase; HNK-1ST; HNK1ST; huHNK-1ST; MGC17148
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382100,391,860 - 100,417,668 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2100,391,860 - 100,417,668 (-)EnsemblGRCh38hg38GRCh38
GRCh372101,008,322 - 101,034,130 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362100,374,754 - 100,400,523 (-)NCBINCBI36Build 36hg18NCBI36
Build 342100,466,839 - 100,492,609NCBI
Celera295,212,945 - 95,238,710 (-)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef294,773,099 - 94,798,904 (-)NCBIHuRef
CHM1_12101,012,667 - 101,038,475 (-)NCBICHM1_1
T2T-CHM13v2.02100,850,699 - 100,876,504 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
Golgi apparatus  (IEA,TAS)
Golgi membrane  (IEA,ISS,TAS)
membrane  (IEA,TAS)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1433500   PMID:8419650   PMID:8619474   PMID:9110174   PMID:9478973   PMID:10464296   PMID:12080076   PMID:12477932   PMID:15489334   PMID:16344560   PMID:19470764   PMID:20950796  
PMID:21828042   PMID:21873635   PMID:21988832   PMID:22020094   PMID:22268729   PMID:22801424   PMID:22990118   PMID:23269668   PMID:26186194   PMID:28514442   PMID:30021884   PMID:32149355  
PMID:33961781  


Genomics

Comparative Map Data
CHST10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382100,391,860 - 100,417,668 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2100,391,860 - 100,417,668 (-)EnsemblGRCh38hg38GRCh38
GRCh372101,008,322 - 101,034,130 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362100,374,754 - 100,400,523 (-)NCBINCBI36Build 36hg18NCBI36
Build 342100,466,839 - 100,492,609NCBI
Celera295,212,945 - 95,238,710 (-)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef294,773,099 - 94,798,904 (-)NCBIHuRef
CHM1_12101,012,667 - 101,038,475 (-)NCBICHM1_1
T2T-CHM13v2.02100,850,699 - 100,876,504 (-)NCBIT2T-CHM13v2.0
Chst10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39138,902,948 - 38,937,256 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl138,902,948 - 38,937,242 (-)EnsemblGRCm39 Ensembl
GRCm38138,863,867 - 38,898,177 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl138,863,867 - 38,898,161 (-)EnsemblGRCm38mm10GRCm38
MGSCv37138,920,717 - 38,955,005 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36138,808,418 - 38,842,706 (-)NCBIMGSCv36mm8
Celera138,649,369 - 38,684,228 (-)NCBICelera
Cytogenetic Map1BNCBI
cM Map117.24NCBI
Chst10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8948,588,575 - 48,618,487 (-)NCBIGRCr8
mRatBN7.2941,092,805 - 41,122,737 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl941,092,808 - 41,122,503 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx949,587,281 - 49,617,111 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0954,710,040 - 54,739,861 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0952,993,583 - 53,023,446 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0945,528,928 - 45,559,365 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl945,528,928 - 45,559,140 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0945,222,140 - 45,252,382 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4937,851,796 - 37,881,657 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1937,853,210 - 37,883,071 (-)NCBI
Celera938,843,700 - 38,873,565 (-)NCBICelera
Cytogenetic Map9q22NCBI
Chst10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554706,448,167 - 6,468,386 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554706,448,167 - 6,468,386 (-)NCBIChiLan1.0ChiLan1.0
CHST10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21227,808,690 - 27,834,580 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A27,811,461 - 27,837,341 (+)NCBINHGRI_mPanPan1
PanPan1.12A101,372,705 - 101,398,242 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A101,372,705 - 101,397,850 (-)Ensemblpanpan1.1panPan2
CHST10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11042,311,166 - 42,340,856 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1042,312,903 - 42,339,732 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1042,234,013 - 42,264,162 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01043,177,124 - 43,209,302 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1043,177,402 - 43,209,296 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11042,899,764 - 42,930,103 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01043,172,135 - 43,203,986 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01043,363,262 - 43,393,384 (+)NCBIUU_Cfam_GSD_1.0
Chst10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629286,020,788 - 86,046,099 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936661523,407 - 551,526 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936661523,440 - 548,718 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CHST10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl353,862,618 - 53,898,103 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1353,804,502 - 53,899,244 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2356,449,429 - 56,484,860 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CHST10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1144,114,495 - 4,139,741 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl144,114,464 - 4,131,524 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041171,732,801 - 171,758,688 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Chst10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247495,269,849 - 5,293,680 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247495,269,849 - 5,293,747 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CHST10
22 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_004854.4(CHST10):c.-33+81A>G single nucleotide variant Lung cancer [RCV000091072] Chr2:100414960 [GRCh38]
Chr2:101031422 [GRCh37]
Chr2:2q11.2
uncertain significance
GRCh38/hg38 2q11.2-12.3(chr2:100378510-108472871)x3 copy number gain See cases [RCV000050836] Chr2:100378510..108472871 [GRCh38]
Chr2:100994972..109089327 [GRCh37]
Chr2:100361404..108455759 [NCBI36]
Chr2:2q11.2-12.3
pathogenic
GRCh38/hg38 2q11.1-12.1(chr2:94817406-103252396)x3 copy number gain See cases [RCV000052946] Chr2:94817406..103252396 [GRCh38]
Chr2:95618109..103868854 [GRCh37]
Chr2:94846878..103235286 [NCBI36]
Chr2:2q11.1-12.1
pathogenic
GRCh38/hg38 2q11.2-13(chr2:97672522-110211318)x3 copy number gain See cases [RCV000052947] Chr2:97672522..110211318 [GRCh38]
Chr2:98288985..110968895 [GRCh37]
Chr2:97655417..110326184 [NCBI36]
Chr2:2q11.2-13
pathogenic
GRCh38/hg38 2p11.2-q11.2(chr2:91443218-102334856)x3 copy number gain See cases [RCV000052945] Chr2:91443218..102334856 [GRCh38]
Chr2:91617683..102951316 [GRCh37]
Chr2:90981410..102317748 [NCBI36]
Chr2:2p11.2-q11.2
pathogenic
GRCh38/hg38 2q11.2(chr2:98787057-100785053)x1 copy number loss See cases [RCV000054057] Chr2:98787057..100785053 [GRCh38]
Chr2:99403520..101401515 [GRCh37]
Chr2:98769952..100767947 [NCBI36]
Chr2:2q11.2
pathogenic
GRCh38/hg38 2q11.2(chr2:99253497-101559639)x3 copy number gain See cases [RCV000136916] Chr2:99253497..101559639 [GRCh38]
Chr2:99869960..102176101 [GRCh37]
Chr2:99236392..101542533 [NCBI36]
Chr2:2q11.2
uncertain significance
GRCh38/hg38 2q11.2(chr2:100404604-100908738)x3 copy number gain See cases [RCV000139353] Chr2:100404604..100908738 [GRCh38]
Chr2:101021066..101525200 [GRCh37]
Chr2:100387498..100891632 [NCBI36]
Chr2:2q11.2
likely benign
GRCh38/hg38 2q11.2(chr2:98411773-101636907)x1 copy number loss See cases [RCV000139206] Chr2:98411773..101636907 [GRCh38]
Chr2:99028236..102253369 [GRCh37]
Chr2:98394668..101619801 [NCBI36]
Chr2:2q11.2
likely pathogenic
GRCh38/hg38 2q11.1-13(chr2:94678532-110602409)x3 copy number gain See cases [RCV000141075] Chr2:94678532..110602409 [GRCh38]
Chr2:95344257..111359986 [GRCh37]
Chr2:94707984..111076455 [NCBI36]
Chr2:2q11.1-13
pathogenic
GRCh38/hg38 2q11.2(chr2:100406992-100919730)x3 copy number gain See cases [RCV000143677] Chr2:100406992..100919730 [GRCh38]
Chr2:101023454..101536192 [GRCh37]
Chr2:100389886..100902624 [NCBI36]
Chr2:2q11.2
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q11.1-12.3(chr2:95529039-108518266) copy number gain See cases [RCV000449270] Chr2:95529039..108518266 [GRCh37]
Chr2:2q11.1-12.3
pathogenic
GRCh37/hg19 2q11.1-13(chr2:95327499-111370025)x4 copy number gain See cases [RCV000446842] Chr2:95327499..111370025 [GRCh37]
Chr2:2q11.1-13
pathogenic
GRCh37/hg19 2q11.2(chr2:100890121-101188008)x3 copy number gain See cases [RCV000445655] Chr2:100890121..101188008 [GRCh37]
Chr2:2q11.2
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q11.1-12.2(chr2:95518497-107186127) copy number gain See cases [RCV000511158] Chr2:95518497..107186127 [GRCh37]
Chr2:2q11.1-12.2
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q11.2(chr2:101022472-101536192)x3 copy number gain not provided [RCV000682080] Chr2:101022472..101536192 [GRCh37]
Chr2:2q11.2
likely benign|uncertain significance
GRCh37/hg19 2q11.1-13(chr2:96353030-114045463)x3 copy number gain not provided [RCV000682168] Chr2:96353030..114045463 [GRCh37]
Chr2:2q11.1-13
pathogenic
Single allele deletion not provided [RCV000714264] Chr2:40608411..146900718 [GRCh37]
Chr2:2p22.1-q22.3
likely pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
NM_004854.5(CHST10):c.483G>C (p.Lys161Asn) single nucleotide variant not provided [RCV001355648] Chr2:100395559 [GRCh38]
Chr2:101012021 [GRCh37]
Chr2:2q11.2
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 copy number loss See cases [RCV002287563] Chr2:11504318..111365996 [GRCh37]
Chr2:2p25.1-q13
pathogenic
NM_004854.5(CHST10):c.662T>C (p.Ile221Thr) single nucleotide variant Inborn genetic diseases [RCV002728087] Chr2:100393654 [GRCh38]
Chr2:101010116 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.557T>A (p.Phe186Tyr) single nucleotide variant Inborn genetic diseases [RCV002682356] Chr2:100393759 [GRCh38]
Chr2:101010221 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.410T>G (p.Val137Gly) single nucleotide variant Inborn genetic diseases [RCV002727991] Chr2:100397925 [GRCh38]
Chr2:101014387 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.901C>T (p.His301Tyr) single nucleotide variant Inborn genetic diseases [RCV002976843] Chr2:100393415 [GRCh38]
Chr2:101009877 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.106A>G (p.Ser36Gly) single nucleotide variant Inborn genetic diseases [RCV002981188] Chr2:100402650 [GRCh38]
Chr2:101019112 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.281A>G (p.Asp94Gly) single nucleotide variant Inborn genetic diseases [RCV002661364] Chr2:100398054 [GRCh38]
Chr2:101014516 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.998G>A (p.Arg333Gln) single nucleotide variant Inborn genetic diseases [RCV002980441] Chr2:100393318 [GRCh38]
Chr2:101009780 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.457G>A (p.Glu153Lys) single nucleotide variant Inborn genetic diseases [RCV002980592] Chr2:100395585 [GRCh38]
Chr2:101012047 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.310C>T (p.Pro104Ser) single nucleotide variant Inborn genetic diseases [RCV002787385] Chr2:100398025 [GRCh38]
Chr2:101014487 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.724C>T (p.Arg242Cys) single nucleotide variant Inborn genetic diseases [RCV002986338] Chr2:100393592 [GRCh38]
Chr2:101010054 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.298C>G (p.Leu100Val) single nucleotide variant Inborn genetic diseases [RCV002708610] Chr2:100398037 [GRCh38]
Chr2:101014499 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.568G>C (p.Asp190His) single nucleotide variant Inborn genetic diseases [RCV002984057] Chr2:100393748 [GRCh38]
Chr2:101010210 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.293A>G (p.Lys98Arg) single nucleotide variant Inborn genetic diseases [RCV002826291] Chr2:100398042 [GRCh38]
Chr2:101014504 [GRCh37]
Chr2:2q11.2
likely benign
NM_004854.5(CHST10):c.908T>C (p.Val303Ala) single nucleotide variant Inborn genetic diseases [RCV002984580] Chr2:100393408 [GRCh38]
Chr2:101009870 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.695C>T (p.Thr232Ile) single nucleotide variant Inborn genetic diseases [RCV003175879] Chr2:100393621 [GRCh38]
Chr2:101010083 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.134C>A (p.Thr45Lys) single nucleotide variant Inborn genetic diseases [RCV003208543] Chr2:100402622 [GRCh38]
Chr2:101019084 [GRCh37]
Chr2:2q11.2
uncertain significance
NM_004854.5(CHST10):c.989G>A (p.Arg330Gln) single nucleotide variant Inborn genetic diseases [RCV003364629] Chr2:100393327 [GRCh38]
Chr2:101009789 [GRCh37]
Chr2:2q11.2
uncertain significance
GRCh37/hg19 2q11.1-11.2(chr2:95773428-102550061)x3 copy number gain not provided [RCV003484069] Chr2:95773428..102550061 [GRCh37]
Chr2:2q11.1-11.2
likely pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3032
Count of miRNA genes:1016
Interacting mature miRNAs:1232
Transcripts:ENST00000264249, ENST00000409046, ENST00000409701, ENST00000418201, ENST00000420858, ENST00000421474, ENST00000435960, ENST00000448989, ENST00000466583, ENST00000484382, ENST00000485085, ENST00000487860, ENST00000542617
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
A004V45  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372101,018,628 - 101,018,903UniSTSGRCh37
Build 362100,385,060 - 100,385,335RGDNCBI36
Celera295,223,249 - 95,223,524RGD
Cytogenetic Map2q11.2UniSTS
HuRef294,783,402 - 94,783,677UniSTS
GeneMap99-GB4 RH Map2355.47UniSTS
Whitehead-RH Map2511.7UniSTS
D2S1711E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372101,018,667 - 101,018,914UniSTSGRCh37
Build 362100,385,099 - 100,385,346RGDNCBI36
Celera295,223,288 - 95,223,535RGD
Cytogenetic Map2q11.2UniSTS
HuRef294,783,441 - 94,783,688UniSTS
WI-21792  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372101,017,845 - 101,018,096UniSTSGRCh37
Build 362100,384,277 - 100,384,528RGDNCBI36
Celera295,222,466 - 95,222,717RGD
Cytogenetic Map2q11.2UniSTS
HuRef294,782,619 - 94,782,870UniSTS
GeneMap99-GB4 RH Map2356.23UniSTS
Whitehead-RH Map2512.3UniSTS
WI-19927  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372101,008,380 - 101,008,644UniSTSGRCh37
Build 362100,374,812 - 100,375,076RGDNCBI36
Celera295,213,003 - 95,213,267RGD
Cytogenetic Map2q11.2UniSTS
HuRef294,773,157 - 94,773,421UniSTS
GeneMap99-GB4 RH Map2355.14UniSTS
Whitehead-RH Map2507.3UniSTS
A005U12  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372101,017,837 - 101,018,056UniSTSGRCh37
Build 362100,384,269 - 100,384,488RGDNCBI36
Celera295,222,458 - 95,222,677RGD
Cytogenetic Map2q11.2UniSTS
HuRef294,782,611 - 94,782,830UniSTS
GeneMap99-GB4 RH Map2355.3UniSTS
NCBI RH Map2558.7UniSTS
G20503  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372101,017,837 - 101,018,056UniSTSGRCh37
Build 362100,384,269 - 100,384,488RGDNCBI36
Celera295,222,458 - 95,222,677RGD
Cytogenetic Map2q11.2UniSTS
HuRef294,782,611 - 94,782,830UniSTS
STS-W80636  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372101,008,379 - 101,008,618UniSTSGRCh37
Build 362100,374,811 - 100,375,050RGDNCBI36
Celera295,213,002 - 95,213,241RGD
Cytogenetic Map2q11.2UniSTS
HuRef294,773,156 - 94,773,395UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 215 51 599 17 361 14 741 175 2831 71 643 583 5 1 456 1
Low 2101 2626 880 360 1255 202 3607 2017 903 339 804 1013 168 1 1203 2331 4 2
Below cutoff 40 313 241 241 320 241 6 4 7 5 7 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_028153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011512207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011512208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011512210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011512211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017005380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017005381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017005382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017005383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054344658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC012493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF003827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF033827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF070594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU124707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU849869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS255950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA522916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA732392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI968225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000264249   ⟹   ENSP00000264249
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,391,860 - 100,417,668 (-)Ensembl
RefSeq Acc Id: ENST00000409046   ⟹   ENSP00000387121
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,397,911 - 100,417,334 (-)Ensembl
RefSeq Acc Id: ENST00000409701   ⟹   ENSP00000387309
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,393,245 - 100,417,011 (-)Ensembl
RefSeq Acc Id: ENST00000418201   ⟹   ENSP00000416831
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,402,564 - 100,417,351 (-)Ensembl
RefSeq Acc Id: ENST00000420858   ⟹   ENSP00000405922
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,397,936 - 100,415,845 (-)Ensembl
RefSeq Acc Id: ENST00000421474   ⟹   ENSP00000407525
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,398,080 - 100,417,340 (-)Ensembl
RefSeq Acc Id: ENST00000435960   ⟹   ENSP00000395643
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,406,576 - 100,417,379 (-)Ensembl
RefSeq Acc Id: ENST00000448989   ⟹   ENSP00000387977
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,398,052 - 100,417,187 (-)Ensembl
RefSeq Acc Id: ENST00000466583
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,415,053 - 100,417,255 (-)Ensembl
RefSeq Acc Id: ENST00000484382
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,397,908 - 100,417,454 (-)Ensembl
RefSeq Acc Id: ENST00000485085
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,407,673 - 100,417,614 (-)Ensembl
RefSeq Acc Id: ENST00000487860
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2100,408,174 - 100,417,411 (-)Ensembl
RefSeq Acc Id: NM_004854   ⟹   NP_004845
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,668 (-)NCBI
GRCh372101,008,322 - 101,034,130 (-)ENTREZGENE
Build 362100,374,754 - 100,400,523 (-)NCBI Archive
Celera295,212,945 - 95,238,710 (-)RGD
HuRef294,773,099 - 94,798,904 (-)ENTREZGENE
CHM1_12101,012,667 - 101,038,475 (-)NCBI
T2T-CHM13v2.02100,850,699 - 100,876,504 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011512207   ⟹   XP_011510509
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,668 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011512208   ⟹   XP_011510510
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,379 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011512210   ⟹   XP_011510512
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,668 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011512211   ⟹   XP_011510513
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017005380   ⟹   XP_016860869
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,668 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017005381   ⟹   XP_016860870
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,668 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017005382   ⟹   XP_016860871
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,365 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017005383   ⟹   XP_016860872
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024453248   ⟹   XP_024309016
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047446433   ⟹   XP_047302389
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,668 (-)NCBI
RefSeq Acc Id: XM_047446434   ⟹   XP_047302390
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,369 (-)NCBI
RefSeq Acc Id: XM_047446436   ⟹   XP_047302392
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,354 (-)NCBI
RefSeq Acc Id: XM_047446437   ⟹   XP_047302393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,376 (-)NCBI
RefSeq Acc Id: XM_047446438   ⟹   XP_047302394
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,391,860 - 100,417,376 (-)NCBI
RefSeq Acc Id: XM_054344644   ⟹   XP_054200619
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,472 (-)NCBI
RefSeq Acc Id: XM_054344645   ⟹   XP_054200620
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,482 (-)NCBI
RefSeq Acc Id: XM_054344646   ⟹   XP_054200621
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,504 (-)NCBI
RefSeq Acc Id: XM_054344647   ⟹   XP_054200622
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,504 (-)NCBI
RefSeq Acc Id: XM_054344648   ⟹   XP_054200623
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,212 (-)NCBI
RefSeq Acc Id: XM_054344649   ⟹   XP_054200624
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,205 (-)NCBI
RefSeq Acc Id: XM_054344650   ⟹   XP_054200625
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,215 (-)NCBI
RefSeq Acc Id: XM_054344651   ⟹   XP_054200626
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,212 (-)NCBI
RefSeq Acc Id: XM_054344652   ⟹   XP_054200627
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,504 (-)NCBI
RefSeq Acc Id: XM_054344653   ⟹   XP_054200628
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,190 (-)NCBI
RefSeq Acc Id: XM_054344654   ⟹   XP_054200629
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,212 (-)NCBI
RefSeq Acc Id: XM_054344655   ⟹   XP_054200630
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,201 (-)NCBI
RefSeq Acc Id: XM_054344656   ⟹   XP_054200631
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,212 (-)NCBI
RefSeq Acc Id: XM_054344657   ⟹   XP_054200632
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,876,212 (-)NCBI
RefSeq Acc Id: XM_054344658   ⟹   XP_054200633
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02100,850,699 - 100,866,950 (-)NCBI
Protein Sequences
Protein RefSeqs NP_004845 (Get FASTA)   NCBI Sequence Viewer  
  XP_011510509 (Get FASTA)   NCBI Sequence Viewer  
  XP_011510510 (Get FASTA)   NCBI Sequence Viewer  
  XP_011510512 (Get FASTA)   NCBI Sequence Viewer  
  XP_011510513 (Get FASTA)   NCBI Sequence Viewer  
  XP_016860869 (Get FASTA)   NCBI Sequence Viewer  
  XP_016860870 (Get FASTA)   NCBI Sequence Viewer  
  XP_016860871 (Get FASTA)   NCBI Sequence Viewer  
  XP_016860872 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309016 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302389 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302390 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302392 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302393 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302394 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200619 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200620 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200621 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200622 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200623 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200624 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200625 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200626 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200627 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200628 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200629 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200630 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200631 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200632 (Get FASTA)   NCBI Sequence Viewer  
  XP_054200633 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC04707 (Get FASTA)   NCBI Sequence Viewer  
  AAC28651 (Get FASTA)   NCBI Sequence Viewer  
  AAH10441 (Get FASTA)   NCBI Sequence Viewer  
  AAX93044 (Get FASTA)   NCBI Sequence Viewer  
  BAG36052 (Get FASTA)   NCBI Sequence Viewer  
  BAH12534 (Get FASTA)   NCBI Sequence Viewer  
  CAJ75915 (Get FASTA)   NCBI Sequence Viewer  
  CBY88424 (Get FASTA)   NCBI Sequence Viewer  
  EAX01841 (Get FASTA)   NCBI Sequence Viewer  
  EAX01842 (Get FASTA)   NCBI Sequence Viewer  
  EAX01843 (Get FASTA)   NCBI Sequence Viewer  
  EAX01844 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000264249
  ENSP00000264249.3
  ENSP00000387121.1
  ENSP00000387309
  ENSP00000387309.1
  ENSP00000387977.1
  ENSP00000395643.1
  ENSP00000405922.1
  ENSP00000407525.1
  ENSP00000416831.1
GenBank Protein O43529 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_004845   ⟸   NM_004854
- Peptide Label: precursor
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011510512   ⟸   XM_011512210
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011510509   ⟸   XM_011512207
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011510513   ⟸   XM_011512211
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011510510   ⟸   XM_011512208
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016860870   ⟸   XM_017005381
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016860869   ⟸   XM_017005380
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016860872   ⟸   XM_017005383
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016860871   ⟸   XM_017005382
- Peptide Label: isoform X1
- UniProtKB: Q53T18 (UniProtKB/Swiss-Prot),   O43529 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024309016   ⟸   XM_024453248
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot),   B7Z4E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000416831   ⟸   ENST00000418201
RefSeq Acc Id: ENSP00000387309   ⟸   ENST00000409701
RefSeq Acc Id: ENSP00000387121   ⟸   ENST00000409046
RefSeq Acc Id: ENSP00000387977   ⟸   ENST00000448989
RefSeq Acc Id: ENSP00000405922   ⟸   ENST00000420858
RefSeq Acc Id: ENSP00000407525   ⟸   ENST00000421474
RefSeq Acc Id: ENSP00000264249   ⟸   ENST00000264249
RefSeq Acc Id: ENSP00000395643   ⟸   ENST00000435960
RefSeq Acc Id: XP_047302389   ⟸   XM_047446433
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302393   ⟸   XM_047446437
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302394   ⟸   XM_047446438
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302390   ⟸   XM_047446434
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047302392   ⟸   XM_047446436
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200621   ⟸   XM_054344646
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200622   ⟸   XM_054344647
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200627   ⟸   XM_054344652
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200620   ⟸   XM_054344645
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200619   ⟸   XM_054344644
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200625   ⟸   XM_054344650
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200623   ⟸   XM_054344648
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200629   ⟸   XM_054344654
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200626   ⟸   XM_054344651
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200631   ⟸   XM_054344656
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200632   ⟸   XM_054344657
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200624   ⟸   XM_054344649
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200630   ⟸   XM_054344655
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200628   ⟸   XM_054344653
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054200633   ⟸   XM_054344658
- Peptide Label: isoform X1
- UniProtKB: O43529 (UniProtKB/Swiss-Prot),   Q53T18 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O43529-F1-model_v2 AlphaFold O43529 1-356 view protein structure

Promoters
RGD ID:6797197
Promoter ID:HG_KWN:34124
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000264249,   ENST00000409046,   ENST00000409701,   OTTHUMT00000329695,   OTTHUMT00000329739,   OTTHUMT00000329740,   OTTHUMT00000329742,   OTTHUMT00000329743,   OTTHUMT00000329744,   OTTHUMT00000329811,   OTTHUMT00000329812
Position:
Human AssemblyChrPosition (strand)Source
Build 362100,400,169 - 100,400,669 (-)MPROMDB
RGD ID:6861166
Promoter ID:EPDNEW_H3748
Type:initiation region
Name:CHST10_1
Description:carbohydrate sulfotransferase 10
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382100,417,573 - 100,417,633EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:19650 AgrOrtholog
COSMIC CHST10 COSMIC
Ensembl Genes ENSG00000115526 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000264249 ENTREZGENE
  ENST00000264249.8 UniProtKB/Swiss-Prot
  ENST00000409046.5 UniProtKB/TrEMBL
  ENST00000409701 ENTREZGENE
  ENST00000409701.5 UniProtKB/Swiss-Prot
  ENST00000418201.5 UniProtKB/TrEMBL
  ENST00000420858.5 UniProtKB/TrEMBL
  ENST00000421474.5 UniProtKB/TrEMBL
  ENST00000435960.5 UniProtKB/TrEMBL
  ENST00000448989.5 UniProtKB/TrEMBL
GTEx ENSG00000115526 GTEx
HGNC ID HGNC:19650 ENTREZGENE
Human Proteome Map CHST10 Human Proteome Map
InterPro Carb_sulfotrans_8-10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sulfotransferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9486 UniProtKB/Swiss-Prot
NCBI Gene 9486 ENTREZGENE
OMIM 606376 OMIM
PANTHER CARBOHYDRATE SULFOTRANSFERASE 10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12137 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Sulfotransfer_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134920179 PharmGKB
UniProt B7Z4E8 ENTREZGENE, UniProtKB/TrEMBL
  B8ZZ48_HUMAN UniProtKB/TrEMBL
  C9J5X0_HUMAN UniProtKB/TrEMBL
  C9JCK7_HUMAN UniProtKB/TrEMBL
  C9JI33_HUMAN UniProtKB/TrEMBL
  C9JUE4_HUMAN UniProtKB/TrEMBL
  C9JWY0_HUMAN UniProtKB/TrEMBL
  CHSTA_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q53T18 ENTREZGENE
UniProt Secondary Q53T18 UniProtKB/Swiss-Prot