CD1E (CD1e molecule) - Rat Genome Database

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Gene: CD1E (CD1e molecule) Homo sapiens
Analyze
Symbol: CD1E
Name: CD1e molecule
RGD ID: 1352820
HGNC Page HGNC:1638
Description: Predicted to enable endogenous lipid antigen binding activity; exogenous lipid antigen binding activity; and lipopeptide binding activity. Predicted to be involved in several processes, including antigen processing and presentation, endogenous lipid antigen via MHC class Ib; antigen processing and presentation, exogenous lipid antigen via MHC class Ib; and positive regulation of T cell mediated cytotoxicity. Located in Golgi apparatus and nucleolus.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CD1A; CD1E antigen, e polypeptide; differentiation antigen CD1-alpha-3; FLJ17609; hCD1e; leukocyte differentiation antigen; R2; R2G1; T-cell surface glycoprotein CD1e, membrane-associated; thymocyte antigen CD1E
RGD Orthologs
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381158,353,894 - 158,357,553 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1158,353,696 - 158,357,553 (+)EnsemblGRCh38hg38GRCh38
GRCh371158,323,684 - 158,327,343 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361156,590,164 - 156,593,967 (+)NCBINCBI36Build 36hg18NCBI36
Build 341155,136,851 - 155,139,458NCBI
Celera1131,394,529 - 131,398,386 (+)NCBICelera
Cytogenetic Map1q23.1NCBI
HuRef1129,681,497 - 129,685,339 (+)NCBIHuRef
CHM1_11159,719,855 - 159,723,698 (+)NCBICHM1_1
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2467814   PMID:2583117   PMID:3053166   PMID:3097645   PMID:7566098   PMID:10488738   PMID:10948205   PMID:11019917   PMID:11580851   PMID:12144626   PMID:12477932   PMID:12671734  
PMID:15032598   PMID:15752135   PMID:16311334   PMID:16344560   PMID:16820217   PMID:17428545   PMID:18208508   PMID:18325888   PMID:18838176   PMID:19196239   PMID:20954848   PMID:21481186  
PMID:21496400   PMID:21696499   PMID:21788486   PMID:21844346   PMID:21873635   PMID:22003931   PMID:22782895   PMID:22880058   PMID:23677998   PMID:24927568   PMID:27653862   PMID:28514442  
PMID:29301656   PMID:32467040   PMID:33961781  


Genomics

Comparative Map Data
CD1E
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381158,353,894 - 158,357,553 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1158,353,696 - 158,357,553 (+)EnsemblGRCh38hg38GRCh38
GRCh371158,323,684 - 158,327,343 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361156,590,164 - 156,593,967 (+)NCBINCBI36Build 36hg18NCBI36
Build 341155,136,851 - 155,139,458NCBI
Celera1131,394,529 - 131,398,386 (+)NCBICelera
Cytogenetic Map1q23.1NCBI
HuRef1129,681,497 - 129,685,339 (+)NCBIHuRef
CHM1_11159,719,855 - 159,723,698 (+)NCBICHM1_1
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBIT2T-CHM13v2.0
LOC100985794
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2191,490,689 - 91,494,269 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1191,234,604 - 91,238,176 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01133,712,012 - 133,716,093 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11137,502,315 - 137,506,799 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1137,502,315 - 137,506,799 (+)Ensemblpanpan1.1panPan2
CD1E
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13823,295,037 - 23,298,004 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3823,290,553 - 23,293,976 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03823,426,497 - 23,429,449 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3823,426,584 - 23,462,931 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13823,176,210 - 23,179,633 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03823,723,924 - 23,727,347 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03824,131,229 - 24,134,653 (-)NCBIUU_Cfam_GSD_1.0
Cd1e
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050584,760,731 - 4,764,153 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049367401,990,876 - 1,993,639 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD1E
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl492,012,791 - 92,020,864 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1492,012,787 - 92,019,363 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24100,355,649 - 100,361,601 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103223791
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1205,573,905 - 5,588,338 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl205,572,822 - 5,577,064 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660384,761,446 - 4,764,972 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in CD1E
21 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q23.1-25.1(chr1:157747246-176021247)x3 copy number gain See cases [RCV000051854] Chr1:157747246..176021247 [GRCh38]
Chr1:157717036..175990383 [GRCh37]
Chr1:155983660..174257006 [NCBI36]
Chr1:1q23.1-25.1		 pathogenic
GRCh38/hg38 1q23.1-23.3(chr1:156664483-160727411)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051851]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051851]|See cases [RCV000051851] Chr1:156664483..160727411 [GRCh38]
Chr1:156634275..160697201 [GRCh37]
Chr1:154900899..158963825 [NCBI36]
Chr1:1q23.1-23.3		 pathogenic
NM_001042583.2(CD1E):c.96G>A (p.Glu32=) single nucleotide variant Malignant melanoma [RCV000059934] Chr1:158354414 [GRCh38]
Chr1:158324204 [GRCh37]
Chr1:156590828 [NCBI36]
Chr1:1q23.1		 not provided
NM_001042583.2(CD1E):c.587G>A (p.Gly196Glu) single nucleotide variant Malignant melanoma [RCV000059935] Chr1:158355531 [GRCh38]
Chr1:158325321 [GRCh37]
Chr1:156591945 [NCBI36]
Chr1:1q23.1		 not provided
NM_001042583.2(CD1E):c.747G>T (p.Gln249His) single nucleotide variant Malignant melanoma [RCV000059936] Chr1:158355948 [GRCh38]
Chr1:158325738 [GRCh37]
Chr1:156592362 [NCBI36]
Chr1:1q23.1		 not provided
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_030893.4(CD1E):c.792C>T (p.Asp264=) single nucleotide variant not provided [RCV000883590] Chr1:158355993 [GRCh38]
Chr1:158325783 [GRCh37]
Chr1:1q23.1		 benign
GRCh37/hg19 1q23.1-24.2(chr1:157321299-167391423)x1 copy number loss not provided [RCV000848773] Chr1:157321299..167391423 [GRCh37]
Chr1:1q23.1-24.2		 pathogenic
NM_030893.4(CD1E):c.305A>G (p.His102Arg) single nucleotide variant not provided [RCV000955252] Chr1:158354623 [GRCh38]
Chr1:158324413 [GRCh37]
Chr1:1q23.1		 benign
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44		 uncertain significance
GRCh37/hg19 1q23.1(chr1:158167184-158427171)x3 copy number gain not provided [RCV002474940] Chr1:158167184..158427171 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.329C>T (p.Ala110Val) single nucleotide variant not specified [RCV004197928] Chr1:158354647 [GRCh38]
Chr1:158324437 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.1148G>A (p.Arg383His) single nucleotide variant not specified [RCV004216122] Chr1:158356877 [GRCh38]
Chr1:158326667 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.379G>A (p.Ala127Thr) single nucleotide variant not specified [RCV004209353] Chr1:158355323 [GRCh38]
Chr1:158325113 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.1039G>C (p.Val347Leu) single nucleotide variant not specified [RCV004229951] Chr1:158356768 [GRCh38]
Chr1:158326558 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.223C>T (p.Arg75Cys) single nucleotide variant not specified [RCV004230198] Chr1:158354541 [GRCh38]
Chr1:158324331 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.113G>A (p.Arg38His) single nucleotide variant not specified [RCV004076024] Chr1:158354431 [GRCh38]
Chr1:158324221 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.769G>C (p.Gly257Arg) single nucleotide variant not specified [RCV004174584] Chr1:158355970 [GRCh38]
Chr1:158325760 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.154C>T (p.His52Tyr) single nucleotide variant not specified [RCV004244140] Chr1:158354472 [GRCh38]
Chr1:158324262 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.428A>G (p.Gln143Arg) single nucleotide variant not specified [RCV004123043] Chr1:158355372 [GRCh38]
Chr1:158325162 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.590T>C (p.Leu197Pro) single nucleotide variant not specified [RCV004219348] Chr1:158355534 [GRCh38]
Chr1:158325324 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.775G>A (p.Val259Ile) single nucleotide variant not specified [RCV004114622] Chr1:158355976 [GRCh38]
Chr1:158325766 [GRCh37]
Chr1:1q23.1		 likely benign
NM_030893.4(CD1E):c.1142A>G (p.Lys381Arg) single nucleotide variant not specified [RCV004250488] Chr1:158356871 [GRCh38]
Chr1:158326661 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.1147C>T (p.Arg383Cys) single nucleotide variant not specified [RCV004341414] Chr1:158356876 [GRCh38]
Chr1:158326666 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.65A>G (p.Gln22Arg) single nucleotide variant not specified [RCV004347966] Chr1:158354383 [GRCh38]
Chr1:158324173 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.1030C>T (p.Pro344Ser) single nucleotide variant not specified [RCV004340447] Chr1:158356759 [GRCh38]
Chr1:158326549 [GRCh37]
Chr1:1q23.1		 uncertain significance
GRCh37/hg19 1q23.1-23.3(chr1:158001058-162858285)x1 copy number loss not provided [RCV003483944] Chr1:158001058..162858285 [GRCh37]
Chr1:1q23.1-23.3		 likely pathogenic
GRCh37/hg19 1q21.1-23.1(chr1:144368497-158992086)x3 copy number gain not specified [RCV003986717] Chr1:144368497..158992086 [GRCh37]
Chr1:1q21.1-23.1		 pathogenic
NM_030893.4(CD1E):c.1021C>T (p.Pro341Ser) single nucleotide variant not specified [RCV004433290] Chr1:158356750 [GRCh38]
Chr1:158326540 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.758G>T (p.Gly253Val) single nucleotide variant not specified [RCV004433295] Chr1:158355959 [GRCh38]
Chr1:158325749 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.1045C>T (p.Leu349Phe) single nucleotide variant not specified [RCV004433292] Chr1:158356774 [GRCh38]
Chr1:158326564 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.490C>T (p.Arg164Trp) single nucleotide variant not specified [RCV004433294] Chr1:158355434 [GRCh38]
Chr1:158325224 [GRCh37]
Chr1:1q23.1		 uncertain significance
NM_030893.4(CD1E):c.584C>T (p.Ala195Val) single nucleotide variant not specified [RCV004336823] Chr1:158355528 [GRCh38]
Chr1:158325318 [GRCh37]
Chr1:1q23.1		 uncertain significance
NC_000001.10:g.158323371_158352947del29577 deletion Primary amenorrhea [RCV000754396] Chr1:158353581..158383157 [GRCh38]
Chr1:158323371..158352947 [GRCh37]
Chr1:1q23.1		 likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3093
Count of miRNA genes:643
Interacting mature miRNAs:703
Transcripts:ENST00000368154, ENST00000368155, ENST00000368156, ENST00000368157, ENST00000368160, ENST00000368161, ENST00000368162, ENST00000368163, ENST00000368164, ENST00000368165, ENST00000368166, ENST00000368167, ENST00000434258, ENST00000444681, ENST00000452291, ENST00000464822
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH70821  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,326,374 - 158,326,626UniSTSGRCh37
Build 361156,592,998 - 156,593,250RGDNCBI36
Celera1131,397,417 - 131,397,669RGD
Cytogenetic Map1q22-q23UniSTS
HuRef1129,684,370 - 129,684,622UniSTS
GeneMap99-GB4 RH Map1568.66UniSTS
NCBI RH Map11426.2UniSTS
RH46983  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,327,126 - 158,327,267UniSTSGRCh37
Build 361156,593,750 - 156,593,891RGDNCBI36
Celera1131,398,169 - 131,398,310RGD
Cytogenetic Map1q22-q23UniSTS
HuRef1129,685,122 - 129,685,263UniSTS
GeneMap99-GB4 RH Map1590.02UniSTS
AL009528  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,324,482 - 158,324,659UniSTSGRCh37
Build 361156,591,106 - 156,591,283RGDNCBI36
Celera1131,395,525 - 131,395,702RGD
Cytogenetic Map1q22-q23UniSTS
HuRef1129,682,493 - 129,682,670UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High 1
Medium 1 14 2 27 3 14 6 7 16 4
Low 463 403 274 186 360 106 1771 94 236 132 535 530 79 254 1029
Below cutoff 1519 1872 1014 321 872 247 1566 1186 1072 160 591 670 74 710 1110

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001042583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001042584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001042585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001042586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001042587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001185107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001185108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001185110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001185112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001185113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001185114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001185115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047434050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047434051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047434054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047434055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA283335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AA354546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF142669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH010757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH010758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ251334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ251335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ289122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL121986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC131693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA827206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC406237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M14666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X14975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X79517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X79518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X79519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000368154   ⟹   ENSP00000357136
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,989 - 158,356,896 (+)Ensembl
RefSeq Acc Id: ENST00000368155   ⟹   ENSP00000357137
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,989 - 158,356,896 (+)Ensembl
RefSeq Acc Id: ENST00000368156   ⟹   ENSP00000357138
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,989 - 158,356,896 (+)Ensembl
RefSeq Acc Id: ENST00000368157   ⟹   ENSP00000357139
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,989 - 158,356,896 (+)Ensembl
RefSeq Acc Id: ENST00000368160   ⟹   ENSP00000357142
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,989 - 158,357,492 (+)Ensembl
RefSeq Acc Id: ENST00000368161   ⟹   ENSP00000357143
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,989 - 158,357,522 (+)Ensembl
RefSeq Acc Id: ENST00000368162   ⟹   ENSP00000357144
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,355,894 - 158,357,497 (+)Ensembl
RefSeq Acc Id: ENST00000368163   ⟹   ENSP00000357145
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,910 - 158,357,529 (+)Ensembl
RefSeq Acc Id: ENST00000368164   ⟹   ENSP00000357146
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,916 - 158,357,196 (+)Ensembl
RefSeq Acc Id: ENST00000368165   ⟹   ENSP00000357147
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,883 - 158,356,896 (+)Ensembl
RefSeq Acc Id: ENST00000368166   ⟹   ENSP00000357148
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,885 - 158,357,499 (+)Ensembl
RefSeq Acc Id: ENST00000368167   ⟹   ENSP00000357149
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,894 - 158,357,553 (+)Ensembl
RefSeq Acc Id: ENST00000444681   ⟹   ENSP00000402906
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,696 - 158,357,553 (+)Ensembl
RefSeq Acc Id: ENST00000452291   ⟹   ENSP00000416228
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,353,844 - 158,356,896 (+)Ensembl
RefSeq Acc Id: ENST00000464822
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,354,180 - 158,355,338 (+)Ensembl
RefSeq Acc Id: NM_001042583   ⟹   NP_001036048
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
Build 361156,590,164 - 156,593,967 (+)NCBI Archive
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001042584   ⟹   NP_001036049
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
Build 361156,590,164 - 156,593,967 (+)NCBI Archive
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001042585   ⟹   NP_001036050
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
Build 361156,590,164 - 156,593,967 (+)NCBI Archive
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001042586   ⟹   NP_001036051
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
Build 361156,590,164 - 156,593,967 (+)NCBI Archive
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001042587   ⟹   NP_001036052
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
Build 361156,590,164 - 156,593,967 (+)NCBI Archive
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001185107   ⟹   NP_001172036
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001185108   ⟹   NP_001172037
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001185110   ⟹   NP_001172039
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001185112   ⟹   NP_001172041
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001185113   ⟹   NP_001172042
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001185114   ⟹   NP_001172043
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001185115   ⟹   NP_001172044
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: NM_030893   ⟹   NP_112155
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
GRCh371158,323,486 - 158,327,343 (+)ENTREZGENE
Build 361156,590,164 - 156,593,967 (+)NCBI Archive
HuRef1129,681,497 - 129,685,339 (+)ENTREZGENE
CHM1_11159,719,855 - 159,723,698 (+)NCBI
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510133   ⟹   XP_011508435
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047434050   ⟹   XP_047290006
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
RefSeq Acc Id: XM_047434051   ⟹   XP_047290007
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
RefSeq Acc Id: XM_047434054   ⟹   XP_047290010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
RefSeq Acc Id: XM_047434055   ⟹   XP_047290011
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,357,553 (+)NCBI
RefSeq Acc Id: XM_054339566   ⟹   XP_054195541
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
RefSeq Acc Id: XM_054339567   ⟹   XP_054195542
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
RefSeq Acc Id: XM_054339568   ⟹   XP_054195543
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
RefSeq Acc Id: XM_054339569   ⟹   XP_054195544
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
RefSeq Acc Id: XM_054339570   ⟹   XP_054195545
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01157,490,987 - 157,494,646 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001036048 (Get FASTA)   NCBI Sequence Viewer  
  NP_001036049 (Get FASTA)   NCBI Sequence Viewer  
  NP_001036050 (Get FASTA)   NCBI Sequence Viewer  
  NP_001036051 (Get FASTA)   NCBI Sequence Viewer  
  NP_001036052 (Get FASTA)   NCBI Sequence Viewer  
  NP_001172036 (Get FASTA)   NCBI Sequence Viewer  
  NP_001172037 (Get FASTA)   NCBI Sequence Viewer  
  NP_001172039 (Get FASTA)   NCBI Sequence Viewer  
  NP_001172041 (Get FASTA)   NCBI Sequence Viewer  
  NP_001172042 (Get FASTA)   NCBI Sequence Viewer  
  NP_001172043 (Get FASTA)   NCBI Sequence Viewer  
  NP_001172044 (Get FASTA)   NCBI Sequence Viewer  
  NP_112155 (Get FASTA)   NCBI Sequence Viewer  
  XP_011508435 (Get FASTA)   NCBI Sequence Viewer  
  XP_047290006 (Get FASTA)   NCBI Sequence Viewer  
  XP_047290007 (Get FASTA)   NCBI Sequence Viewer  
  XP_047290010 (Get FASTA)   NCBI Sequence Viewer  
  XP_047290011 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195541 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195542 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195543 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195544 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195545 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA51937 (Get FASTA)   NCBI Sequence Viewer  
  AAD37582 (Get FASTA)   NCBI Sequence Viewer  
  AAI31694 (Get FASTA)   NCBI Sequence Viewer  
  AAK52913 (Get FASTA)   NCBI Sequence Viewer  
  AAK52914 (Get FASTA)   NCBI Sequence Viewer  
  BAG64199 (Get FASTA)   NCBI Sequence Viewer  
  BAG64215 (Get FASTA)   NCBI Sequence Viewer  
  BAG64304 (Get FASTA)   NCBI Sequence Viewer  
  BAG64319 (Get FASTA)   NCBI Sequence Viewer  
  BAG64568 (Get FASTA)   NCBI Sequence Viewer  
  CAA33100 (Get FASTA)   NCBI Sequence Viewer  
  CAA56053 (Get FASTA)   NCBI Sequence Viewer  
  CAA56054 (Get FASTA)   NCBI Sequence Viewer  
  CAA56055 (Get FASTA)   NCBI Sequence Viewer  
  CAB82829 (Get FASTA)   NCBI Sequence Viewer  
  CAB93150 (Get FASTA)   NCBI Sequence Viewer  
  CAB93151 (Get FASTA)   NCBI Sequence Viewer  
  CAB93152 (Get FASTA)   NCBI Sequence Viewer  
  CAB93153 (Get FASTA)   NCBI Sequence Viewer  
  CAB93154 (Get FASTA)   NCBI Sequence Viewer  
  CAB93155 (Get FASTA)   NCBI Sequence Viewer  
  CAB93156 (Get FASTA)   NCBI Sequence Viewer  
  CAB93157 (Get FASTA)   NCBI Sequence Viewer  
  CAB93158 (Get FASTA)   NCBI Sequence Viewer  
  CAB93159 (Get FASTA)   NCBI Sequence Viewer  
  CAB93160 (Get FASTA)   NCBI Sequence Viewer  
  CAB93161 (Get FASTA)   NCBI Sequence Viewer  
  CAC07175 (Get FASTA)   NCBI Sequence Viewer  
  EAW52828 (Get FASTA)   NCBI Sequence Viewer  
  EAW52829 (Get FASTA)   NCBI Sequence Viewer  
  EAW52830 (Get FASTA)   NCBI Sequence Viewer  
  EAW52831 (Get FASTA)   NCBI Sequence Viewer  
  EAW52832 (Get FASTA)   NCBI Sequence Viewer  
  EAW52833 (Get FASTA)   NCBI Sequence Viewer  
  EAW52834 (Get FASTA)   NCBI Sequence Viewer  
  EAW52835 (Get FASTA)   NCBI Sequence Viewer  
  EAW52836 (Get FASTA)   NCBI Sequence Viewer  
  EAW52837 (Get FASTA)   NCBI Sequence Viewer  
  EAW52838 (Get FASTA)   NCBI Sequence Viewer  
  EAW52839 (Get FASTA)   NCBI Sequence Viewer  
  EAW52840 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000357136
  ENSP00000357136.1
  ENSP00000357137
  ENSP00000357137.3
  ENSP00000357138
  ENSP00000357138.1
  ENSP00000357139
  ENSP00000357139.1
  ENSP00000357142
  ENSP00000357142.3
  ENSP00000357143
  ENSP00000357143.3
  ENSP00000357144.2
  ENSP00000357145
  ENSP00000357145.3
  ENSP00000357146
  ENSP00000357146.3
  ENSP00000357147
  ENSP00000357147.3
  ENSP00000357148
  ENSP00000357148.3
  ENSP00000357149
  ENSP00000357149.3
  ENSP00000402906
  ENSP00000402906.2
  ENSP00000416228
  ENSP00000416228.2
GenBank Protein P15812 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_112155   ⟸   NM_030893
- Peptide Label: isoform a precursor
- UniProtKB: Q9UMM1 (UniProtKB/Swiss-Prot),   Q96TD1 (UniProtKB/Swiss-Prot),   Q96TD0 (UniProtKB/Swiss-Prot),   Q712F5 (UniProtKB/Swiss-Prot),   Q712F4 (UniProtKB/Swiss-Prot),   Q712F3 (UniProtKB/Swiss-Prot),   Q712F2 (UniProtKB/Swiss-Prot),   Q712F1 (UniProtKB/Swiss-Prot),   Q712F0 (UniProtKB/Swiss-Prot),   Q712E9 (UniProtKB/Swiss-Prot),   Q712E8 (UniProtKB/Swiss-Prot),   Q712E7 (UniProtKB/Swiss-Prot),   Q712E6 (UniProtKB/Swiss-Prot),   Q712E5 (UniProtKB/Swiss-Prot),   Q712E4 (UniProtKB/Swiss-Prot),   Q5TDL1 (UniProtKB/Swiss-Prot),   Q5TDK8 (UniProtKB/Swiss-Prot),   Q5TDK6 (UniProtKB/Swiss-Prot),   Q5TDK5 (UniProtKB/Swiss-Prot),   Q5TDK4 (UniProtKB/Swiss-Prot),   Q5TDK3 (UniProtKB/Swiss-Prot),   Q5TDJ9 (UniProtKB/Swiss-Prot),   E7EP01 (UniProtKB/Swiss-Prot),   B4DZV3 (UniProtKB/Swiss-Prot),   Q9Y5M3 (UniProtKB/Swiss-Prot),   P15812 (UniProtKB/Swiss-Prot),   A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001036048   ⟸   NM_001042583
- Peptide Label: isoform b precursor
- UniProtKB: A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001036049   ⟸   NM_001042584
- Peptide Label: isoform c precursor
- UniProtKB: A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001036050   ⟸   NM_001042585
- Peptide Label: isoform d precursor
- UniProtKB: A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001172036   ⟸   NM_001185107
- Peptide Label: isoform g precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot),   A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001172044   ⟸   NM_001185115
- Peptide Label: isoform h precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot),   A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001172037   ⟸   NM_001185108
- Peptide Label: isoform i precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot),   A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001172043   ⟸   NM_001185114
- Peptide Label: isoform m precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001172041   ⟸   NM_001185112
- Peptide Label: isoform j precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001036051   ⟸   NM_001042586
- Peptide Label: isoform e precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001036052   ⟸   NM_001042587
- Peptide Label: isoform f precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001172042   ⟸   NM_001185113
- Peptide Label: isoform k precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001172039   ⟸   NM_001185110
- Peptide Label: isoform l precursor
- UniProtKB: P15812 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011508435   ⟸   XM_011510133
- Peptide Label: isoform X1
- UniProtKB: A2RRL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000416228   ⟸   ENST00000452291
RefSeq Acc Id: ENSP00000402906   ⟸   ENST00000444681
RefSeq Acc Id: ENSP00000357143   ⟸   ENST00000368161
RefSeq Acc Id: ENSP00000357142   ⟸   ENST00000368160
RefSeq Acc Id: ENSP00000357145   ⟸   ENST00000368163
RefSeq Acc Id: ENSP00000357144   ⟸   ENST00000368162
RefSeq Acc Id: ENSP00000357139   ⟸   ENST00000368157
RefSeq Acc Id: ENSP00000357136   ⟸   ENST00000368154
RefSeq Acc Id: ENSP00000357138   ⟸   ENST00000368156
RefSeq Acc Id: ENSP00000357137   ⟸   ENST00000368155
RefSeq Acc Id: ENSP00000357147   ⟸   ENST00000368165
RefSeq Acc Id: ENSP00000357146   ⟸   ENST00000368164
RefSeq Acc Id: ENSP00000357149   ⟸   ENST00000368167
RefSeq Acc Id: ENSP00000357148   ⟸   ENST00000368166
RefSeq Acc Id: XP_047290007   ⟸   XM_047434051
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047290006   ⟸   XM_047434050
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047290010   ⟸   XM_047434054
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047290011   ⟸   XM_047434055
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054195541   ⟸   XM_054339566
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054195543   ⟸   XM_054339568
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054195542   ⟸   XM_054339567
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054195544   ⟸   XM_054339569
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054195545   ⟸   XM_054339570
- Peptide Label: isoform X5
Protein Domains
Ig-like   Immunoglobulin C1-set

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P15812-F1-model_v2 AlphaFold P15812 1-388 view protein structure

Promoters
RGD ID:6784876
Promoter ID:HG_KWN:5647
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Jurkat
Transcripts:ENST00000368165,   ENST00000368166,   NM_030893,   OTTHUMT00000089862,   UC001FRY.1,   UC001FRZ.1,   UC001FSA.1,   UC001FSB.1,   UC001FSD.1,   UC001FSF.1,   UC001FSG.1,   UC001FSH.1,   UC001FSI.1,   UC001FSJ.1,   UC009WSV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361156,590,121 - 156,590,621 (+)MPROMDB
RGD ID:6857692
Promoter ID:EPDNEW_H2011
Type:initiation region
Name:CD1E_1
Description:CD1e molecule
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,353,894 - 158,353,954EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:1638 AgrOrtholog
COSMIC CD1E COSMIC
Ensembl Genes ENSG00000158488 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000368154 ENTREZGENE
  ENST00000368154.5 UniProtKB/Swiss-Prot
  ENST00000368155 ENTREZGENE
  ENST00000368155.7 UniProtKB/Swiss-Prot
  ENST00000368156 ENTREZGENE
  ENST00000368156.5 UniProtKB/Swiss-Prot
  ENST00000368157 ENTREZGENE
  ENST00000368157.5 UniProtKB/Swiss-Prot
  ENST00000368160 ENTREZGENE
  ENST00000368160.7 UniProtKB/Swiss-Prot
  ENST00000368161 ENTREZGENE
  ENST00000368161.7 UniProtKB/Swiss-Prot
  ENST00000368162.2 UniProtKB/TrEMBL
  ENST00000368163 ENTREZGENE
  ENST00000368163.7 UniProtKB/Swiss-Prot
  ENST00000368164 ENTREZGENE
  ENST00000368164.7 UniProtKB/Swiss-Prot
  ENST00000368165 ENTREZGENE
  ENST00000368165.7 UniProtKB/Swiss-Prot
  ENST00000368166 ENTREZGENE
  ENST00000368166.7 UniProtKB/Swiss-Prot
  ENST00000368167 ENTREZGENE
  ENST00000368167.8 UniProtKB/Swiss-Prot
  ENST00000444681 ENTREZGENE
  ENST00000444681.6 UniProtKB/Swiss-Prot
  ENST00000452291 ENTREZGENE
  ENST00000452291.6 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.500.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000158488 GTEx
HGNC ID HGNC:1638 ENTREZGENE
Human Proteome Map CD1E Human Proteome Map
InterPro Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_C1-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_I-like_Ag-recog UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_I-like_Ag-recog_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_I/II-like_Ag-recog UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:913 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 913 ENTREZGENE
OMIM 188411 OMIM
PANTHER MHC CLASS I-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  T-CELL SURFACE GLYCOPROTEIN CD1E, MEMBRANE-ASSOCIATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam C1-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MHC_I_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA26197 PharmGKB
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IGc1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2RRL5 ENTREZGENE, UniProtKB/TrEMBL
  B4DZV3 ENTREZGENE
  CD1E_HUMAN UniProtKB/Swiss-Prot
  E7EP01 ENTREZGENE
  H0Y345_HUMAN UniProtKB/TrEMBL
  P15812 ENTREZGENE
  Q5TDJ9 ENTREZGENE
  Q5TDK3 ENTREZGENE
  Q5TDK4 ENTREZGENE
  Q5TDK5 ENTREZGENE
  Q5TDK6 ENTREZGENE
  Q5TDK8 ENTREZGENE
  Q5TDL1 ENTREZGENE
  Q712E4 ENTREZGENE
  Q712E5 ENTREZGENE
  Q712E6 ENTREZGENE
  Q712E7 ENTREZGENE
  Q712E8 ENTREZGENE
  Q712E9 ENTREZGENE
  Q712F0 ENTREZGENE
  Q712F1 ENTREZGENE
  Q712F2 ENTREZGENE
  Q712F3 ENTREZGENE
  Q712F4 ENTREZGENE
  Q712F5 ENTREZGENE
  Q96TD0 ENTREZGENE
  Q96TD1 ENTREZGENE
  Q9UMM1 ENTREZGENE
  Q9Y5M3 ENTREZGENE
UniProt Secondary B4DZV3 UniProtKB/Swiss-Prot
  E7EP01 UniProtKB/Swiss-Prot
  Q5TDJ9 UniProtKB/Swiss-Prot
  Q5TDK3 UniProtKB/Swiss-Prot
  Q5TDK4 UniProtKB/Swiss-Prot
  Q5TDK5 UniProtKB/Swiss-Prot
  Q5TDK6 UniProtKB/Swiss-Prot
  Q5TDK8 UniProtKB/Swiss-Prot
  Q5TDL1 UniProtKB/Swiss-Prot
  Q712E4 UniProtKB/Swiss-Prot
  Q712E5 UniProtKB/Swiss-Prot
  Q712E6 UniProtKB/Swiss-Prot
  Q712E7 UniProtKB/Swiss-Prot
  Q712E8 UniProtKB/Swiss-Prot
  Q712E9 UniProtKB/Swiss-Prot
  Q712F0 UniProtKB/Swiss-Prot
  Q712F1 UniProtKB/Swiss-Prot
  Q712F2 UniProtKB/Swiss-Prot
  Q712F3 UniProtKB/Swiss-Prot
  Q712F4 UniProtKB/Swiss-Prot
  Q712F5 UniProtKB/Swiss-Prot
  Q96TD0 UniProtKB/Swiss-Prot
  Q96TD1 UniProtKB/Swiss-Prot
  Q9UMM1 UniProtKB/Swiss-Prot
  Q9Y5M3 UniProtKB/Swiss-Prot