Golm1 (golgi membrane protein 1) - Rat Genome Database

Name: Golm1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Golm1 (golgi membrane protein 1) Mus musculus

Analyze

Symbol:

Golm1

Name:

golgi membrane protein 1

RGD ID:

1322922

MGI Page

MGI

Description:

Acts upstream of or within nucleus organization and regulation of lipid metabolic process. Located in Golgi apparatus. Is expressed in rectum. Orthologous to human GOLM1 (golgi membrane protein 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2310001L02Rik; AW125446; D030064E01Rik; Gol; golgi membrane protein GP73; golgi phosphoprotein 2; Golph2; GP7; GP73; MGC107447; PSEC02; PSEC0257

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GOLM1 (golgi membrane protein 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):	Golm1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Golm1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GOLM1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GOLM1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Golm1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GOLM1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GOLM1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Golm1 (golgi membrane protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	GOLM1 (golgi membrane protein 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Golm1 (golgi membrane protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zgc:56525	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	golm1	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	59,782,810 - 59,823,598 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	59,782,440 - 59,823,625 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	59,634,996 - 59,675,784 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	59,634,626 - 59,675,811 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	59,736,357 - 59,777,145 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	59,644,619 - 59,685,407 (-)	NCBI		MGSCv36	mm8
Celera	13	60,691,172 - 60,731,889 (-)	NCBI		Celera
Cytogenetic Map	13	B2	NCBI
cM Map	13	31.87	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Disease Models (ISO)

COVID-19 (ISO)

genetic disease (ISO)

hepatitis (ISO)

hepatocellular carcinoma (ISO)

liver cirrhosis (ISO)

lung adenocarcinoma (ISO)

osteoporosis (IMP,ISO)

pancreatic cancer (ISO)

prostate cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1,1-dichloroethene (EXP)

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

2-methoxyethanol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4-hydroxyphenyl retinamide (EXP)

all-trans-retinoic acid (ISO)

amphetamine (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (EXP)

azathioprine (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (EXP)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbon nanotube (EXP)

choline (EXP)

cobalt dichloride (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diethylstilbestrol (EXP)

endosulfan (ISO)

ethanol (EXP)

ethyl methanesulfonate (ISO)

folic acid (EXP)

formaldehyde (ISO)

FR900359 (ISO)

furan (EXP)

genistein (EXP)

gentamycin (ISO)

indometacin (ISO)

inulin (EXP)

ivermectin (ISO)

ketoconazole (ISO)

L-methionine (EXP)

methyl methanesulfonate (ISO)

N-nitrosodiethylamine (EXP)

oxaliplatin (ISO)

ozone (EXP)

paracetamol (EXP,ISO)

paraquat (ISO)

perfluorooctane-1-sulfonic acid (EXP)

phenobarbital (EXP)

pirinixic acid (EXP)

rac-lactic acid (ISO)

SB 431542 (ISO)

testosterone (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (ISO)

titanium dioxide (EXP)

topotecan (ISO)

troglitazone (EXP)

urethane (ISO)

valproic acid (ISO)

vancomycin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

nucleus organization (IMP)

regulation of lipid metabolic process (IMP)

Cellular Component

Golgi apparatus (IBA,IDA,ISO)

membrane (IEA)

Molecular Function

molecular_function (ND)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal glomerular capillary thrombosis (IAGP)

abnormal hepatocyte morphology (IAGP)

abnormal kidney morphology (IAGP)

abnormal proximal convoluted tubule morphology (IAGP)

abnormal renal glomerular capsule morphology (IAGP)

glomerulosclerosis (IAGP)

hepatic steatosis (IAGP)

kidney atrophy (IAGP)

kidney inflammation (IAGP)

lethargy (IAGP)

liver inflammation (IAGP)

pale kidney (IAGP)

premature death (IAGP)

renal cast (IAGP)

renal glomerulus hypertrophy (IAGP)

rough coat (IAGP)

weight loss (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	External validation of genetically predicted protein biomarkers for pancreatic cancer risk using aptamer-based plasma levels: A prospective analysis in the Atherosclerosis Risk in Communities Study.	Liu T, etal., Int J Cancer. 2023 Sep 15;153(6):1201-1216. doi: 10.1002/ijc.34624. Epub 2023 Jun 20.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	GOLM1 Stimulation of Glutamine Metabolism Promotes Osteoporosis via Inhibiting Osteogenic Differentiation of BMSCs.	Shen G, etal., Cell Physiol Biochem. 2018;50(5):1916-1928. doi: 10.1159/000494872. Epub 2018 Nov 5.
6.	Increased Golgi protein 73 expression in hepatocellular carcinoma tissue correlates with tumor aggression but not survival.	Sun Y, etal., J Gastroenterol Hepatol. 2011 Jul;26(7):1207-12. doi: 10.1111/j.1440-1746.2011.06733.x.
7.	Serological AFP/Golgi protein 73 could be a new diagnostic parameter of hepatic diseases.	Tian L, etal., Int J Cancer. 2011 Oct 15;129(8):1923-31. doi: 10.1002/ijc.25838. Epub 2011 Mar 11.
8.	Plasma proteomics of SARS-CoV-2 infection and severity reveals impact on Alzheimer and coronary disease pathways.	Wang L, etal., medRxiv. 2022 Jul 25:2022.07.25.22278025. doi: 10.1101/2022.07.25.22278025. Preprint.
9.	GOLM1 promotes prostate cancer progression through activating PI3K-AKT-mTOR signaling.	Yan G, etal., Prostate. 2018 Feb;78(3):166-177. doi: 10.1002/pros.23461. Epub 2017 Nov 27.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11544199	PMID:12466851	PMID:12477932	PMID:12520002	PMID:12904583	PMID:14610273
PMID:15489334	PMID:16141072	PMID:16141073	PMID:16602821	PMID:17015433	PMID:17967808	PMID:18799693	PMID:18830387	PMID:19596473	PMID:21267068	PMID:21677750	PMID:21873635
PMID:33119928	PMID:33850109	PMID:34531366	PMID:34853313	PMID:34992299	PMID:37271284	PMID:37755435	PMID:38029327	PMID:38459023	PMID:38459588

Genomics

Comparative Map Data

Golm1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	59,782,810 - 59,823,598 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	59,782,440 - 59,823,625 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	59,634,996 - 59,675,784 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	59,634,626 - 59,675,811 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	59,736,357 - 59,777,145 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	59,644,619 - 59,685,407 (-)	NCBI		MGSCv36	mm8
Celera	13	60,691,172 - 60,731,889 (-)	NCBI		Celera
Cytogenetic Map	13	B2	NCBI
cM Map	13	31.87	NCBI

GOLM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	86,026,146 - 86,100,149 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	86,026,146 - 86,100,173 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	88,641,061 - 88,715,064 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	87,830,876 - 87,904,903 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	85,870,612 - 85,944,637	NCBI
Celera	9	59,212,998 - 59,287,045 (-)	NCBI		Celera
Cytogenetic Map	9	q21.33	NCBI
HuRef	9	58,466,347 - 58,492,566 (-)	NCBI		HuRef
HuRef	9	58,496,898 - 58,539,236 (-)	NCBI		HuRef
CHM1_1	9	88,787,586 - 88,861,938 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	98,176,673 - 98,251,783 (-)	NCBI		T2T-CHM13v2.0

Golm1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	4,996,978 - 5,049,278 (+)	NCBI		GRCr8
mRatBN7.2	17	4,995,925 - 5,044,329 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	4,996,104 - 5,034,057 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	17	5,373,095 - 5,411,186 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	5,382,034 - 5,409,038 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	7,597,770 - 7,635,854 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	10,911,513 - 10,938,960 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	17	5,116,711 - 5,154,795 (+)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

Golm1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	1,439,578 - 1,496,371 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955432	1,434,759 - 1,497,916 (+)	NCBI	ChiLan1.0	ChiLan1.0

GOLM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	85,126,728 - 85,214,450 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	85,133,145 - 85,220,391 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	38,823,820 - 38,910,984 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	83,005,832 - 83,092,215 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	83,005,832 - 83,080,202 (+)	Ensembl	panpan1.1		panPan2

GOLM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	73,609,224 - 73,654,280 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	73,546,172 - 73,652,370 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	74,363,157 - 74,417,043 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	73,908,129 - 73,962,465 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	73,851,889 - 73,962,465 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	73,716,955 - 73,769,756 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	73,483,436 - 73,537,750 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	74,189,817 - 74,242,695 (+)	NCBI		UU_Cfam_GSD_1.0

Golm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	120,221,183 - 120,274,096 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936680	1,463,991 - 1,528,322 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GOLM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	29,118,314 - 29,219,018 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	29,117,578 - 29,219,024 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	33,164,037 - 33,263,674 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GOLM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	96,706,865 - 96,778,687 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	96,708,548 - 96,779,065 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	85,059,864 - 85,130,694 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Golm1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624809	9,486,724 - 9,534,333 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624809	9,485,832 - 9,555,889 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Golm1
1050 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1374
Count of miRNA genes:	485
Interacting mature miRNAs:	544
Transcripts:	ENSMUST00000022039, ENSMUST00000095739
Prediction methods:	Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884393	Humsd7_m	humerus midshaft diameter 7, 16 week (mouse)					13	3950000	76048119	Mouse
1301015	Sysbp2_m	systolic blood pressure 2 (mouse)			Not determined		13	20477612	59821605	Mouse
4142147	Mvwf4_m	modifier of von Willebrand factor 4 (mouse)			Not determined			20477612	112898424	Mouse
4142009	Pregq3_m	pregnancy QTL 3 (mouse)			Not determined		13	20615512	72385189	Mouse
4142489	Ath25_m	atherosclerosis 25 (mouse)			Not determined			25836529	59836529	Mouse
10401111	Pgia40_m	proteoglycan induced arthritis 40 (mouse)			Not determined		13	27918469	61918560	Mouse
1300710	Pcd4ts2_m	p-glycoprotein positive CD4 T cell subset 2 (mouse)			Not determined		13	28210442	62210544	Mouse
1357802	Vtbt15_m	vertebral trabecular bone trait 15 (mouse)			Not determined		13	28217379	62217515	Mouse
10045621	Heal21_m	wound healing/regeneration 21 (mouse)			Not determined		13	28217379	62217515	Mouse
10755533	Chol18_m	cholesterol 18 (mouse)					13	30969467	64969467	Mouse
10755517	Chol15_m	cholesterol 15 (mouse)					13	30969467	64969467	Mouse
12738439	Twq4_m	testis weight QTL 4 (mouse)					13	31129110	65129110	Mouse
14696729	Kidlq2_m	kidney weight, left QTL 2 (mouse)					13	31344736	65344736	Mouse
1301299	Sluc23_m	susceptibility to lung cancer 23 (mouse)			Not determined		13	34921943	68922081	Mouse
10412235	Scgq5_m	spontaneous crescentic glomerulonephritis QTL 5 (mouse)			Not determined		13	36060908	96239162	Mouse
1357587	Pfat3_m	predicted fat percentage 3 (mouse)			Not determined		13	36101530	70101640	Mouse
1301734	Acsns2_m	Angiostrongylus costaricensis nematode susceptibility 2 (mouse)			Not determined		13	36101530	70101640	Mouse
1300561	Heal7_m	wound healing/regeneration 7 (mouse)			Not determined		13	36144820	70144904	Mouse
1300862	Cfbw5_m	cystic fibrosis body weight 5 (mouse)			Not determined		13	38720358	72720517	Mouse
1300985	Bmd13_m	bone mineral density 13 (mouse)			Not determined		13	39629249	73629397	Mouse
1302157	Bwem2_m	body weight day 30 males 2 (mouse)			Not determined		13	39629249	73629397	Mouse
1301801	Cpfd5_m	cerebellum pattern fissures (mouse)			Not determined		13	39629249	73629397	Mouse
15039353	Nmrs35_m	NAFLD-associated magnetic resonance shift 35 (mouse)					13	40588253	74588253	Mouse
1300668	Pas10_m	pulmonary adenoma susceptibility 10 (mouse)			Not determined		13	41489042	75489158	Mouse
4142331	Bxs6_m	BXSB/MpJ autoimmune nephritis 6 (mouse)			Not determined			45210442	83744746	Mouse
10412109	Bxs7_m	BXSB/MpJ autoimmune nephritis 7 (mouse)			Not determined		13	45210442	83744746	Mouse
26884396	Humsd4_m	humerus midshaft diameter 4, 10 week (mouse)					13	47853476	73148119	Mouse
4142372	Moo2_m	modifier of Odc2 (mouse)			Not determined		X	50318411	84318559	Mouse
1301666	Eae13_m	susceptibility to experimental allergic encephalomyelitis 13 (mouse)			Not determined		13	50318411	84318559	Mouse
1300573	Elsgp2_m	elevated serum gp70 2 (mouse)			Not determined		13	50616828	84617027	Mouse
14746975	Manh74_m	mandible shape 74 (mouse)					13	52477269	86477269	Mouse
1302073	Pgct1_m	primordial germ cell tumor locus 1 (mouse)			Not determined		13	53820783	87820897	Mouse
1357563	Bmch6_m	bone mechanical trait 6 (mouse)			Not determined		13	55384980	89385140	Mouse
4142314	Tailaq3_m	tail length adjusted QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
4140959	W10q17_m	weight 10 weeks QTL 17 (mouse)			Not determined			55720354	112431103	Mouse
4141992	W6q16_m	weight 6 weeks QTL 16 (mouse)			Not determined			55720354	112431103	Mouse
4142241	Tailq3_m	tail length QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
1558850	Sgp3_m	serum gp70 production 3 (mouse)			Not determined		13	56470456	76971314	Mouse
10402414	Sgp5_m	serum gp70 production 5 (mouse)			Not determined		13	56470456	105422186	Mouse
1357553	Cia28_m	collagen induced arthritis 28 (mouse)			Not determined		13	56629249	96239162	Mouse
10412163	Wra1_m	wheel running activity 1 (mouse)			Not determined		13	59132600	93132738	Mouse

Markers in Region

03.MMHAP9FLA3.seq

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	13	59,658,083 - 59,658,258	UniSTS	GRCm38
MGSCv37	13	59,759,444 - 59,759,619	UniSTS	GRCm37
Celera	13	60,714,190 - 60,714,365	UniSTS
Cytogenetic Map	13	B3	UniSTS
Whitehead_YAC	13		UniSTS

D13Mit186

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	13	59,673,645 - 59,673,791	UniSTS	GRCm38
MGSCv37	13	59,775,006 - 59,775,152	UniSTS	GRCm37
Celera	13	60,729,749 - 60,729,895	UniSTS
Cytogenetic Map	13	B3	UniSTS
cM Map	13	36.0	UniSTS
Whitehead Genetic	13	23.0	UniSTS
Whitehead_YAC	13		UniSTS

AW125446

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	13	59,635,329 - 59,635,444	UniSTS	GRCm38
MGSCv37	13	59,736,690 - 59,736,805	UniSTS	GRCm37
Celera	13	60,691,505 - 60,691,620	UniSTS
Cytogenetic Map	13	B3	UniSTS
Whitehead/MRC_RH	13	617.45	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001035122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_027307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC134869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK009072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK051066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK133865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK160475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC011152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC018170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC098486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU152451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CD552063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CD560663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK391733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CN529028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DV645181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000022039 ⟹ ENSMUSP00000022039

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	59,782,440 - 59,823,625 (-)	Ensembl
GRCm38.p6 Ensembl	13	59,634,626 - 59,675,811 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000095739 ⟹ ENSMUSP00000093410

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	59,782,810 - 59,823,594 (-)	Ensembl
GRCm38.p6 Ensembl	13	59,634,996 - 59,675,780 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000224160

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	59,822,442 - 59,823,594 (-)	Ensembl
GRCm38.p6 Ensembl	13	59,674,628 - 59,675,780 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000225333

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	59,792,906 - 59,823,586 (-)	Ensembl
GRCm38.p6 Ensembl	13	59,645,092 - 59,675,772 (-)	Ensembl

RefSeq Acc Id:

NM_001035122 ⟹ NP_001030294

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	59,782,810 - 59,823,598 (-)	NCBI
GRCm38	13	59,634,996 - 59,675,784 (-)	ENTREZGENE
MGSCv37	13	59,736,357 - 59,777,145 (-)	RGD
Celera	13	60,691,172 - 60,731,889 (-)	RGD
cM Map	13		ENTREZGENE

Sequence:

show sequence

AGACGTCCTCGGCAGAGACCGCGCGGACGAGCGGACGGAGCGCCTCGCTGCCCCGCAGGTTCTC
GGCCCTGGTTCTAAGATGATGGGATTGGGGAATGGGCGTCGCAGCATGAAGTCTCCGCCCCTTA
TCCTGGCTGCCCTGGTGGCCTGTGTTATTGTGCTAGGCTTCAACTACTGGATTGCTAGCTCGAG
AAGCGTGGAACTCCAGACGCGCATTGTAGAGCTGGAAGGCCGGGTCCGCAGGGCGGCTGCAGAG
AGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAGAGAGCAAC
TTGACAGGATCCAGTCTAGCCACAGCTTCCAGCTGGAGAATGTCAACAAGCTACACCAGGATGA
GAAGGCGGTTTTAGTGAATAACATCACCACAGGCGAGAAGCTCATTCGAGACCTGCAAGACCAG
TTGAAGGCACTGCAGAGGAGTTACAGCAGCCTGCAGCAGGATATCTTCCAATTCCAGAAGAACC
AGACCAGCCTGGAGAAGAAGTTCTCCTATGACCTGAACCAGTGTATCAGCCAGATGACCGAGGT
GAAGGAACAGTGTGACGAGCGGATAGAGGAGGTCATCAGAAAGCGAAACGAAGCACCGGGTTCC
AGAGACCTGGCTGAAACCAACAACCAACATCAGCAGGCCCTCAAGCCTCAGCCCAAGCTTCAGG
AAGAAGTCCCATCAGAGGAACAGATGCCACAAGAGAAAGGGGATGTGCCCAGAAACAAGTCCCA
GATTCCAGCCCCCAATTCAGAGAGCTTGGGTTTGAAGCCACAGGTGCAGAATGAGGAAACCAAT
GAGATTCAGGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGTGGCGGATG
GCACTCGGGTAGGAGCTGAGAAACTCGATCAGCACACACAGCTACCAGCTGGCCTGTTGGCCAG
GCCTGAGGAGGACTCTCAGTACCCTGAGCGGGAGCAGCTTGTCATCCGGGATAGGCAGGAGCAG
CAGCGTGCATCAGAGGAAGGGGGAGGCCAGAAGAACCCAGGAGATGAATACGACATGGATGAAA
ACGAAGCAGAATCTGAGAGGGAGAAGCAGGCAGCCCTTGCAGGGAATGACAGAAATATAAATGT
TCTTAATGCTGACGCTCAGAAGAGAGGCATAATAAATGTGCCCGTCGGGAGTGAAAGGCAGAGC
CACATTCTAAATCAAGTAGGCATTCATATTCCTCAACAAGCCTGAAGAGATCCTACGGGGGTTC
ACTGTGACTCAACTGTGAAATGGACAGCGAAATGAACGTCGGCCCATTATTGTGGGGTTTAATC
AGTACATTTTGCAAAGAAAAAAAAATGGGACCATCTCAGACAGTTTGGGGGTACTTTTAAAGTG
TCTACAAGAGATGTCAAAATTGATCAAGCTTTGATTAACAGGTATTTCTTAAGCAGGTCAACAC
CAAAAAGAGAAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGTGTAAGACA
GAGTAGACTGAGGGCAGCTGCTGGCCACAGCGGCTCCCTCCTTGTGCTGCCGCTTGCCAGTTTC
TGTCCACAGATATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCATCAATGGCCTAG
AGCTCTTACCGTCAGCATAAACACCACTAGTCAGTTCTATACAAAAGCTGTTCTGTGCAAAAAC
TGCATTAATTAAAAGACAGCCACCATATCTGGCTTACTTCAGGATTCGGAAGGCTGAGGCAGGA
GATTGCTGCAAGTTCTGAGCCAGCCTAAAGCAACATAGTGAGTGCCAAGCTAAGATGAGCAAGA
ATGAAAGCCCCTGTCTCAAATATCAGTGAGAGTTGTTACTTTAAAAAAGACTGGTTTAAATAAC
CTTCATTATTCTTTTGATGTACAGAACACTATGAAGTTACTGACAATGCGAGCACCTATGGTCT
GTGTTTGTTTGATTGGGCAGAGTTTCTAGTAAGTCACTCATCTCACTAAGAAAGGCAGTGCCTG
CACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGCTGCTGGAG
GATACTCAGGTTTCAAGCTGGATTCCTACGAAGGCAAGAGCAACACGAGCTGTTTTTCCCAAGT
TTATATACTGTTTGAAAAACACACAAGGTGAATGTTAGTTTTGAAAGATTTGTAGTTCATTGAT
GGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGACTGACTGCAGTCACA
CTGACGACTCGTTCCAGAAACGATCTCTCTGAAGAGTGGCTGATCTGACTCTGAAGTGCTGGCT
AAATAGGAAGCAGCAGCACTAGAGGCACAGGGGCTGAAGATCCCTGCAGTGAAGTGGATGCCGG
GTGGTCCAGCTGTCTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACGTGGGTTGT
TTCTCACTGCAGAACTACCCAGTTCTACCCCATGTTTAGATGAGTACTGTTTAATGTCACAAGC
CATTTTCCTTTACACTTTAACTTGCCAGAGCCTCAGATGGACTGTTCTTACACCTTTTCTGCTC
CTAGGTCCCAAACTCAAGGGGACTTTGTATTTCTAGTGCTTGTTTTCTACCTTAATCTGGTTTG
GGTTTAAAGTGTAGATATTGCTGACAGGCTGTGCTGATTTCCTTTTTAACAAGTACAATAGGTA
AGGGCCACATTCTACCCTTTGGGTTCTAAGATTCCAGGGTACCAATAGCCATGCATGACAGCTG
AGCCATACCACCTCCGTACTGACCAGGAAGTAACCAACATCCTGTCTTCGCTAGCATCTTGATC
AAGTCCAGTCAGGCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTGGGCTGGCA
TAGCTCCGTGAGAACTTCTACCTAGCCAGTATGTGTGAGTCCCTGGGTCGCATCCTCAGCACCA
ACGAACACTGTCACATTAGAGTTAGGCCACTGAAATCTTAGAGTCATTTTTGCTGTAAGCCAAA
TGAACTAGCAATAGTCAGGCCAAACCACAAAGCCAGATTGAATTTCAGGGTGGCTCACTCTGCT
AAAAGCACTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGTCACAGCAC
ACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGCTGGTGGCC
AAGAACAAAACCTACACCTCAGGGCACTTGGGACTTCAGCTGGAACAAAGGGATGCACCACTTT
CCAACAAGACCTGAAACTCAGCGGCCTACAAACTCCTACCTGATACCAGCAGCAGACACTGCAG
TGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACCCTTAGAAATCTGTGTCACAACACAGT
CACAATCCTCATGTACTTTAGCGATCCTCTTACCTCAAAATCAATTTGTAATTTGACCAGAATC
TTAAATCCTTAATAAATCTTGTGTTTTGAAACTTCAA

hide sequence

RefSeq Acc Id:

NM_027307 ⟹ NP_081583

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	59,782,810 - 59,823,598 (-)	NCBI
GRCm38	13	59,634,996 - 59,675,784 (-)	ENTREZGENE
MGSCv37	13	59,736,357 - 59,777,145 (-)	RGD
Celera	13	60,691,172 - 60,731,889 (-)	RGD
cM Map	13		ENTREZGENE

Sequence:

show sequence

AGACGTCCTCGGCAGAGACCGCGCGGACGAGCGGACGGAGCGCCTCGCTGCCCCGCAGGAACAT
TCGTTCTTCAGGAGCGGGAGTGGAGTGACGTGCACACCAGTTTGCTGAGCCGCTTAGCGCAGTG
CAATGGCTGAGCGTGTATGAATGGCCATCTCTTGGGTCGCTTGGACAGTTAGTTGTATTTCCGA
AGGTTCTCGGCCCTGGTTCTAAGATGATGGGATTGGGGAATGGGCGTCGCAGCATGAAGTCTCC
GCCCCTTATCCTGGCTGCCCTGGTGGCCTGTGTTATTGTGCTAGGCTTCAACTACTGGATTGCT
AGCTCGAGAAGCGTGGAACTCCAGACGCGCATTGTAGAGCTGGAAGGCCGGGTCCGCAGGGCGG
CTGCAGAGAGAGGTGCTGTAGAGCTCAAGAAGAATGAGTTCCAGGGCGAGCTGCAGAAGCAGAG
AGAGCAACTTGACAGGATCCAGTCTAGCCACAGCTTCCAGCTGGAGAATGTCAACAAGCTACAC
CAGGATGAGAAGGCGGTTTTAGTGAATAACATCACCACAGGCGAGAAGCTCATTCGAGACCTGC
AAGACCAGTTGAAGGCACTGCAGAGGAGTTACAGCAGCCTGCAGCAGGATATCTTCCAATTCCA
GAAGAACCAGACCAGCCTGGAGAAGAAGTTCTCCTATGACCTGAACCAGTGTATCAGCCAGATG
ACCGAGGTGAAGGAACAGTGTGACGAGCGGATAGAGGAGGTCATCAGAAAGCGAAACGAAGCAC
CGGGTTCCAGAGACCTGGCTGAAACCAACAACCAACATCAGCAGGCCCTCAAGCCTCAGCCCAA
GCTTCAGGAAGAAGTCCCATCAGAGGAACAGATGCCACAAGAGAAAGGGGATGTGCCCAGAAAC
AAGTCCCAGATTCCAGCCCCCAATTCAGAGAGCTTGGGTTTGAAGCCACAGGTGCAGAATGAGG
AAACCAATGAGATTCAGGCTGTCGGTGAGGAGCACCAACAGGCATCCATCCAAGGGCAGGCGGT
GGCGGATGGCACTCGGGTAGGAGCTGAGAAACTCGATCAGCACACACAGCTACCAGCTGGCCTG
TTGGCCAGGCCTGAGGAGGACTCTCAGTACCCTGAGCGGGAGCAGCTTGTCATCCGGGATAGGC
AGGAGCAGCAGCGTGCATCAGAGGAAGGGGGAGGCCAGAAGAACCCAGGAGATGAATACGACAT
GGATGAAAACGAAGCAGAATCTGAGAGGGAGAAGCAGGCAGCCCTTGCAGGGAATGACAGAAAT
ATAAATGTTCTTAATGCTGACGCTCAGAAGAGAGGCATAATAAATGTGCCCGTCGGGAGTGAAA
GGCAGAGCCACATTCTAAATCAAGTAGGCATTCATATTCCTCAACAAGCCTGAAGAGATCCTAC
GGGGGTTCACTGTGACTCAACTGTGAAATGGACAGCGAAATGAACGTCGGCCCATTATTGTGGG
GTTTAATCAGTACATTTTGCAAAGAAAAAAAAATGGGACCATCTCAGACAGTTTGGGGGTACTT
TTAAAGTGTCTACAAGAGATGTCAAAATTGATCAAGCTTTGATTAACAGGTATTTCTTAAGCAG
GTCAACACCAAAAAGAGAAATGAGGCTGTCCTGTCTAGGCAGCAGCACCTCCTCACCCTGCAGT
GTAAGACAGAGTAGACTGAGGGCAGCTGCTGGCCACAGCGGCTCCCTCCTTGTGCTGCCGCTTG
CCAGTTTCTGTCCACAGATATTAAGTAGCTCATCACTCCTGCACACACTTGATTCCACCATCAA
TGGCCTAGAGCTCTTACCGTCAGCATAAACACCACTAGTCAGTTCTATACAAAAGCTGTTCTGT
GCAAAAACTGCATTAATTAAAAGACAGCCACCATATCTGGCTTACTTCAGGATTCGGAAGGCTG
AGGCAGGAGATTGCTGCAAGTTCTGAGCCAGCCTAAAGCAACATAGTGAGTGCCAAGCTAAGAT
GAGCAAGAATGAAAGCCCCTGTCTCAAATATCAGTGAGAGTTGTTACTTTAAAAAAGACTGGTT
TAAATAACCTTCATTATTCTTTTGATGTACAGAACACTATGAAGTTACTGACAATGCGAGCACC
TATGGTCTGTGTTTGTTTGATTGGGCAGAGTTTCTAGTAAGTCACTCATCTCACTAAGAAAGGC
AGTGCCTGCACTGCGCTCTGGACAAAGGCTGCATGGGCAGAGGTGTCCAAGAGGAAGGGTTGGC
TGCTGGAGGATACTCAGGTTTCAAGCTGGATTCCTACGAAGGCAAGAGCAACACGAGCTGTTTT
TCCCAAGTTTATATACTGTTTGAAAAACACACAAGGTGAATGTTAGTTTTGAAAGATTTGTAGT
TCATTGATGGTAATGCATCGTAAGTCTTGATTCCGATCAGCAGCTTCTGATTGCAGACTGACTG
CAGTCACACTGACGACTCGTTCCAGAAACGATCTCTCTGAAGAGTGGCTGATCTGACTCTGAAG
TGCTGGCTAAATAGGAAGCAGCAGCACTAGAGGCACAGGGGCTGAAGATCCCTGCAGTGAAGTG
GATGCCGGGTGGTCCAGCTGTCTGTGCCTCTTTAAAGCACACATTTAAACCCCTATGGCAGACG
TGGGTTGTTTCTCACTGCAGAACTACCCAGTTCTACCCCATGTTTAGATGAGTACTGTTTAATG
TCACAAGCCATTTTCCTTTACACTTTAACTTGCCAGAGCCTCAGATGGACTGTTCTTACACCTT
TTCTGCTCCTAGGTCCCAAACTCAAGGGGACTTTGTATTTCTAGTGCTTGTTTTCTACCTTAAT
CTGGTTTGGGTTTAAAGTGTAGATATTGCTGACAGGCTGTGCTGATTTCCTTTTTAACAAGTAC
AATAGGTAAGGGCCACATTCTACCCTTTGGGTTCTAAGATTCCAGGGTACCAATAGCCATGCAT
GACAGCTGAGCCATACCACCTCCGTACTGACCAGGAAGTAACCAACATCCTGTCTTCGCTAGCA
TCTTGATCAAGTCCAGTCAGGCATGCTTCAGTGTTTCTAGGAAATGGAAGGTGCCACAGGGTTG
GGCTGGCATAGCTCCGTGAGAACTTCTACCTAGCCAGTATGTGTGAGTCCCTGGGTCGCATCCT
CAGCACCAACGAACACTGTCACATTAGAGTTAGGCCACTGAAATCTTAGAGTCATTTTTGCTGT
AAGCCAAATGAACTAGCAATAGTCAGGCCAAACCACAAAGCCAGATTGAATTTCAGGGTGGCTC
ACTCTGCTAAAAGCACTGCCCCTTCAGAGTACAAATGGGAAACCCCACGGGCTTAGACAGTTGT
CACAGCACACCAGTGACAAGACCAGCAGAGGAATGAGCAGCAAATCAAGGATGGGGTCTCTTGC
TGGTGGCCAAGAACAAAACCTACACCTCAGGGCACTTGGGACTTCAGCTGGAACAAAGGGATGC
ACCACTTTCCAACAAGACCTGAAACTCAGCGGCCTACAAACTCCTACCTGATACCAGCAGCAGA
CACTGCAGTGTGATGTGGTTTTCCTTCAACTGCATGACTAAAGACCCTTAGAAATCTGTGTCAC
AACACAGTCACAATCCTCATGTACTTTAGCGATCCTCTTACCTCAAAATCAATTTGTAATTTGA
CCAGAATCTTAAATCCTTAATAAATCTTGTGTTTTGAAACTTCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001030294	(Get FASTA)	NCBI Sequence Viewer
	NP_081583	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH11152	(Get FASTA)	NCBI Sequence Viewer
	AAH98486	(Get FASTA)	NCBI Sequence Viewer
	BAE21897	(Get FASTA)	NCBI Sequence Viewer
	BAE39697	(Get FASTA)	NCBI Sequence Viewer
	EDL41283	(Get FASTA)	NCBI Sequence Viewer
	EDL41284	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000022039
	ENSMUSP00000022039.6
	ENSMUSP00000093410
	ENSMUSP00000093410.3
GenBank Protein	Q91XA2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001030294 ⟸ NM_001035122

- UniProtKB:

G3X8U4 (UniProtKB/Swiss-Prot), Q91XA2 (UniProtKB/Swiss-Prot), Q3UZG0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MMGLGNGRRSMKSPPLILAALVACVIVLGFNYWIASSRSVELQTRIVELEGRVRRAAAERGAVE
LKKNEFQGELQKQREQLDRIQSSHSFQLENVNKLHQDEKAVLVNNITTGEKLIRDLQDQLKALQ
RSYSSLQQDIFQFQKNQTSLEKKFSYDLNQCISQMTEVKEQCDERIEEVIRKRNEAPGSRDLAE
TNNQHQQALKPQPKLQEEVPSEEQMPQEKGDVPRNKSQIPAPNSESLGLKPQVQNEETNEIQAV
GEEHQQASIQGQAVADGTRVGAEKLDQHTQLPAGLLARPEEDSQYPEREQLVIRDRQEQQRASE
EGGGQKNPGDEYDMDENEAESEREKQAALAGNDRNINVLNADAQKRGIINVPVGSERQSHILNQ
VGIHIPQQA

hide sequence

RefSeq Acc Id:

NP_081583 ⟸ NM_027307

- UniProtKB:

G3X8U4 (UniProtKB/Swiss-Prot), Q91XA2 (UniProtKB/Swiss-Prot), Q3UZG0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MMGLGNGRRSMKSPPLILAALVACVIVLGFNYWIASSRSVELQTRIVELEGRVRRAAAERGAVE
LKKNEFQGELQKQREQLDRIQSSHSFQLENVNKLHQDEKAVLVNNITTGEKLIRDLQDQLKALQ
RSYSSLQQDIFQFQKNQTSLEKKFSYDLNQCISQMTEVKEQCDERIEEVIRKRNEAPGSRDLAE
TNNQHQQALKPQPKLQEEVPSEEQMPQEKGDVPRNKSQIPAPNSESLGLKPQVQNEETNEIQAV
GEEHQQASIQGQAVADGTRVGAEKLDQHTQLPAGLLARPEEDSQYPEREQLVIRDRQEQQRASE
EGGGQKNPGDEYDMDENEAESEREKQAALAGNDRNINVLNADAQKRGIINVPVGSERQSHILNQ
VGIHIPQQA

hide sequence

RefSeq Acc Id:

ENSMUSP00000022039 ⟸ ENSMUST00000022039

RefSeq Acc Id:

ENSMUSP00000093410 ⟸ ENSMUST00000095739

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q91XA2-F1-model_v2	AlphaFold	Q91XA2	1-393	view protein structure

Promoters

RGD ID:

8680552

Promoter ID:

EPDNEW_M18307

Type:

initiation region

Name:

Golm1_1

Description:

Mus musculus golgi membrane protein 1 , transcript variant 2,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	13	59,675,771 - 59,675,831	EPDNEW

RGD ID:

6823987

Promoter ID:

MM_KWN:14343

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Lung, MEF_B4

Transcripts:

NM_001035122, NM_027307

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	13	59,776,849 - 59,777,349 (-)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1917329	AgrOrtholog
Ensembl Genes	ENSMUSG00000021556	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000022039	ENTREZGENE
	ENSMUST00000022039.7	UniProtKB/Swiss-Prot
	ENSMUST00000095739	ENTREZGENE
	ENSMUST00000095739.10	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.287.1490	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	GOLM1/CASC4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:105348	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:1917329	ENTREZGENE
NCBI Gene	105348	ENTREZGENE
PANTHER	PTHR15896	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR15896:SF8	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Golm1	PhenoGen
PRINTS	GOLM1CASC4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	G3X8U4	ENTREZGENE
	GOLM1_MOUSE	UniProtKB/Swiss-Prot
	Q3TIZ8_MOUSE	UniProtKB/TrEMBL
	Q3UZG0	ENTREZGENE, UniProtKB/TrEMBL
	Q4KMM5_MOUSE	UniProtKB/TrEMBL
	Q91XA2	ENTREZGENE
UniProt Secondary	G3X8U4	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Mammalian Phenotype