Arhgap10 (Rho GTPase activating protein 10) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Arhgap10 (Rho GTPase activating protein 10) Mus musculus
Analyze
Symbol: Arhgap10
Name: Rho GTPase activating protein 10
RGD ID: 1322909
MGI Page MGI
Description: Enables GTPase activator activity. Involved in negative regulation of apoptotic process. Acts upstream of or within cytoskeleton organization. Located in cytosol. Is expressed in brain. Orthologous to human ARHGAP10 (Rho GTPase activating protein 10).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A930033B01Rik; PH and SH3 domain-containing rhoGAP protein; PS; PS-GAP; PSG; PSGAP; PSGAP-m; PSGAP-s; rho GTPase-activating protein 10; rho-type GTPase-activating protein 10
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39877,976,995 - 78,244,628 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl877,976,995 - 78,244,582 (-)EnsemblGRCm39 Ensembl
GRCm38877,250,366 - 77,517,999 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl877,250,366 - 77,517,953 (-)EnsemblGRCm38mm10GRCm38
MGSCv37879,774,265 - 80,041,806 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36880,146,991 - 80,413,857 (-)NCBIMGSCv36mm8
Celera881,539,175 - 81,809,141 (-)NCBICelera
Cytogenetic Map8C1NCBI
cM Map836.6NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,IMP,ISO,TAS)
endosome  (IEA)
endosome membrane  (ISO)
membrane  (IEA)
plasma membrane  (IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11238453   PMID:12520002   PMID:14610273   PMID:14691545   PMID:15471851   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16919269  
PMID:21873635   PMID:26073538   PMID:27010858   PMID:32325033   PMID:32699248   PMID:33482876  


Genomics

Comparative Map Data
Arhgap10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39877,976,995 - 78,244,628 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl877,976,995 - 78,244,582 (-)EnsemblGRCm39 Ensembl
GRCm38877,250,366 - 77,517,999 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl877,250,366 - 77,517,953 (-)EnsemblGRCm38mm10GRCm38
MGSCv37879,774,265 - 80,041,806 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36880,146,991 - 80,413,857 (-)NCBIMGSCv36mm8
Celera881,539,175 - 81,809,141 (-)NCBICelera
Cytogenetic Map8C1NCBI
cM Map836.6NCBI
ARHGAP10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384147,732,088 - 148,072,776 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4147,732,063 - 148,072,776 (+)EnsemblGRCh38hg38GRCh38
GRCh374148,653,239 - 148,993,927 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364148,872,903 - 149,213,377 (+)NCBINCBI36Build 36hg18NCBI36
Build 344149,011,057 - 149,351,531NCBI
Celera4145,974,548 - 146,315,244 (+)NCBICelera
Cytogenetic Map4q31.23NCBI
HuRef4144,380,575 - 144,721,071 (+)NCBIHuRef
CHM1_14148,632,138 - 148,972,573 (+)NCBICHM1_1
T2T-CHM13v2.04151,056,194 - 151,396,701 (+)NCBIT2T-CHM13v2.0
Arhgap10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81947,352,783 - 47,614,532 (+)NCBIGRCr8
mRatBN7.21930,448,572 - 30,710,315 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1930,448,637 - 30,710,313 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1937,281,593 - 37,548,488 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01937,935,464 - 38,202,341 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01940,184,555 - 40,454,586 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01934,138,978 - 34,406,593 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1934,139,997 - 34,402,436 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01945,021,122 - 45,282,107 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41932,261,771 - 32,521,913 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1929,930,167 - 30,186,673 (+)NCBICelera
Cytogenetic Map19q11NCBI
Arhgap10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554712,804,162 - 3,052,565 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554712,757,063 - 3,052,565 (+)NCBIChiLan1.0ChiLan1.0
ARHGAP10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23145,588,474 - 145,949,906 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14145,953,932 - 146,312,254 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04140,054,130 - 140,412,646 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14151,726,549 - 152,066,977 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4151,726,549 - 152,066,977 (+)Ensemblpanpan1.1panPan2
ARHGAP10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11546,064,489 - 46,382,079 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1546,070,312 - 46,381,839 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1546,457,487 - 46,775,260 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01546,738,153 - 47,057,893 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1546,743,784 - 47,057,425 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11546,006,428 - 46,324,428 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01546,103,535 - 46,422,910 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01546,412,616 - 46,730,944 (+)NCBIUU_Cfam_GSD_1.0
Arhgap10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530144,036,353 - 44,330,083 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365351,473,736 - 1,767,419 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365351,473,693 - 1,767,437 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGAP10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl880,675,002 - 81,024,452 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1880,674,999 - 81,024,501 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2885,799,351 - 86,042,332 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGAP10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1794,233,257 - 94,568,042 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl794,216,032 - 94,568,502 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603773,923,677 - 74,275,881 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arhgap10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248536,360,119 - 6,424,247 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Arhgap10
9708 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:268
Count of miRNA genes:210
Interacting mature miRNAs:230
Transcripts:ENSMUST00000076316
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse
10766453Char11_mP. chabaudi malaria resistance QTL 11 (mouse)84809006482090180Mouse
1301717Adip4_madiposity 4 (mouse)Not determined84809006482090180Mouse
1301441Skull11_mskull morphology 11 (mouse)Not determined84819016882190288Mouse
1357715Alaa3_malopecia areata 3 (mouse)Not determined84924559183245673Mouse
14746987Manh64_mmandible shape 64 (mouse)85050595884505958Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85050595884505958Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85233484386334843Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86151347995513605Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
11039503Ccc4_mcolitis susceptibility in the Collaborative Cross 4 (mouse)86517423778002730Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
10766466Char12_mP. chabaudi malaria resistance QTL 12 (mouse)86872247983326976Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7158942790929226Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71740461124622354Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871829531105829637Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined872122809106123021Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873929123107929226Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)874126628126826739Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined876402145110402251Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined876411976110412125Mouse

Markers in Region
RH136364  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38877,492,469 - 77,492,654UniSTSGRCm38
MGSCv37880,016,368 - 80,016,553UniSTSGRCm37
Celera881,783,482 - 81,783,667UniSTS
Cytogenetic Map8C2UniSTS
D8Mit342  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38877,489,471 - 77,489,575UniSTSGRCm38
MGSCv37880,013,370 - 80,013,474UniSTSGRCm37
Celera881,780,614 - 81,780,718UniSTS
Cytogenetic Map8C2UniSTS
cM Map834.0UniSTS
Whitehead Genetic836.1UniSTS
Whitehead/MRC_RH8824.56UniSTS
Whitehead_YAC8 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001363417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_156496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001778487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC109139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC119248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AEKQ02006580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF297029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF297030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY179965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY179966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY179967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI736055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU151977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF106470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN703944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV783737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000076316   ⟹   ENSMUSP00000075658
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl877,976,995 - 78,244,582 (-)Ensembl
GRCm38.p6 Ensembl877,250,366 - 77,517,953 (-)Ensembl
RefSeq Acc Id: ENSMUST00000210519   ⟹   ENSMUSP00000147493
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl877,977,548 - 78,244,412 (-)Ensembl
GRCm38.p6 Ensembl877,250,919 - 77,517,783 (-)Ensembl
RefSeq Acc Id: ENSMUST00000210922   ⟹   ENSMUSP00000147485
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl877,977,548 - 78,244,412 (-)Ensembl
GRCm38.p6 Ensembl877,250,919 - 77,517,783 (-)Ensembl
RefSeq Acc Id: NM_001363417   ⟹   NP_001350346
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,244,582 (-)NCBI
GRCm38877,250,366 - 77,517,953 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363418   ⟹   NP_001350347
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,244,582 (-)NCBI
GRCm38877,250,366 - 77,517,953 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363419   ⟹   NP_001350348
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,178,718 (-)NCBI
GRCm38877,250,366 - 77,452,089 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363420   ⟹   NP_001350349
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,178,718 (-)NCBI
GRCm38877,250,366 - 77,452,089 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001363421   ⟹   NP_001350350
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,178,718 (-)NCBI
GRCm38877,250,366 - 77,452,089 (-)NCBI
Sequence:
RefSeq Acc Id: NM_030113   ⟹   NP_084389
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,244,536 (-)NCBI
GRCm38877,250,366 - 77,517,907 (-)NCBI
MGSCv37879,774,265 - 80,041,806 (-)RGD
Celera881,539,175 - 81,809,141 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_156496
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,178,718 (-)NCBI
GRCm38877,250,366 - 77,452,089 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248553   ⟹   XP_011246855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,230,174 (-)NCBI
GRCm38877,250,366 - 77,503,574 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017313015   ⟹   XP_017168504
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,244,615 (-)NCBI
GRCm38877,250,366 - 77,517,985 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017313016   ⟹   XP_017168505
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,244,628 (-)NCBI
GRCm38877,250,366 - 77,517,999 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017313019   ⟹   XP_017168508
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,178,700 (-)NCBI
GRCm38877,250,366 - 77,452,071 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017313020   ⟹   XP_017168509
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,178,745 (-)NCBI
GRCm38877,250,366 - 77,452,071 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017313022   ⟹   XP_017168511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39878,085,177 - 78,244,628 (-)NCBI
GRCm38877,358,548 - 77,517,999 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154381   ⟹   XP_036010274
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,244,628 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154382   ⟹   XP_036010275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39877,976,995 - 78,203,636 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001778487
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39878,072,910 - 78,244,628 (-)NCBI
GRCm38877,346,281 - 77,517,999 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001350346 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350347 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350348 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350349 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350350 (Get FASTA)   NCBI Sequence Viewer  
  NP_084389 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246855 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168504 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168505 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168508 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168509 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168511 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010274 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010275 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK18174 (Get FASTA)   NCBI Sequence Viewer  
  AAK18175 (Get FASTA)   NCBI Sequence Viewer  
  AAO62072 (Get FASTA)   NCBI Sequence Viewer  
  AAO62073 (Get FASTA)   NCBI Sequence Viewer  
  AAO62074 (Get FASTA)   NCBI Sequence Viewer  
  BAB32254 (Get FASTA)   NCBI Sequence Viewer  
  BAC31086 (Get FASTA)   NCBI Sequence Viewer  
  EDL10837 (Get FASTA)   NCBI Sequence Viewer  
  EDL10838 (Get FASTA)   NCBI Sequence Viewer  
  EDL10839 (Get FASTA)   NCBI Sequence Viewer  
  EDL10840 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000075658
  ENSMUSP00000075658.5
  ENSMUSP00000147485
  ENSMUSP00000147485.2
  ENSMUSP00000147493
  ENSMUSP00000147493.2
GenBank Protein Q6Y5D8 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_084389   ⟸   NM_030113
- Peptide Label: isoform 1
- UniProtKB: Q99MT3 (UniProtKB/Swiss-Prot),   Q6Y5D7 (UniProtKB/Swiss-Prot),   Q6Y5D6 (UniProtKB/Swiss-Prot),   Q99MT4 (UniProtKB/Swiss-Prot),   Q6Y5D8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246855   ⟸   XM_011248553
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017168505   ⟸   XM_017313016
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017168509   ⟸   XM_017313020
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_017168504   ⟸   XM_017313015
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017168508   ⟸   XM_017313019
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017168511   ⟸   XM_017313022
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: NP_001350346   ⟸   NM_001363417
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001350347   ⟸   NM_001363418
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001350349   ⟸   NM_001363420
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001350350   ⟸   NM_001363421
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001350348   ⟸   NM_001363419
- Peptide Label: isoform 4
RefSeq Acc Id: ENSMUSP00000147485   ⟸   ENSMUST00000210922
RefSeq Acc Id: ENSMUSP00000147493   ⟸   ENSMUST00000210519
RefSeq Acc Id: ENSMUSP00000075658   ⟸   ENSMUST00000076316
RefSeq Acc Id: XP_036010274   ⟸   XM_036154381
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036010275   ⟸   XM_036154382
- Peptide Label: isoform X5
Protein Domains
BAR   PH   Rho-GAP   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6Y5D8-F1-model_v2 AlphaFold Q6Y5D8 1-786 view protein structure

Promoters
RGD ID:8667515
Promoter ID:EPDNEW_M11789
Type:initiation region
Name:Arhgap10_1
Description:Mus musculus Rho GTPase activating protein 10 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38877,517,913 - 77,517,973EPDNEW
RGD ID:6842778
Promoter ID:MM_KWN:54919
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4
Transcripts:ENSMUST00000035678,   ENSMUST00000081524,   NM_030113
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36880,041,606 - 80,042,492 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1925764 AgrOrtholog
Ensembl Genes ENSMUSG00000037148 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000076316 ENTREZGENE
  ENSMUST00000076316.6 UniProtKB/Swiss-Prot
  ENSMUST00000210519 ENTREZGENE
  ENSMUST00000210519.2 UniProtKB/Swiss-Prot
  ENSMUST00000210922 ENTREZGENE
  ENSMUST00000210922.2 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.555.10 UniProtKB/Swiss-Prot
  1.20.1270.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot
  SH3 Domains UniProtKB/Swiss-Prot
InterPro AH/BAR_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BAR_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GRAF2_SH3 UniProtKB/Swiss-Prot
  GRAF_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot
  PH_domain UniProtKB/Swiss-Prot
  PH_GRAF UniProtKB/Swiss-Prot
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot
  RhoGAP_dom UniProtKB/Swiss-Prot
  SH3-like_dom_sf UniProtKB/Swiss-Prot
  SH3_domain UniProtKB/Swiss-Prot
KEGG Report mmu:78514 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1925764 ENTREZGENE
NCBI Gene 78514 ENTREZGENE
PANTHER OLIGOPHRENIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12552:SF5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BAR_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00169 UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot
  SH3_9 UniProtKB/Swiss-Prot
PhenoGen Arhgap10 PhenoGen
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot
  RHOGAP UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
SMART RhoGAP UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
  SM00233 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot
  SSF103657 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48350 UniProtKB/Swiss-Prot
  SSF50044 UniProtKB/Swiss-Prot
UniProt Q6Y5D6 ENTREZGENE
  Q6Y5D7 ENTREZGENE
  Q6Y5D8 ENTREZGENE
  Q8C9L7_MOUSE UniProtKB/TrEMBL
  Q99MT3 ENTREZGENE
  Q99MT4 ENTREZGENE
  Q9CTN7_MOUSE UniProtKB/TrEMBL
  RHG10_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q6Y5D6 UniProtKB/Swiss-Prot
  Q6Y5D7 UniProtKB/Swiss-Prot
  Q99MT3 UniProtKB/Swiss-Prot
  Q99MT4 UniProtKB/Swiss-Prot