Tdrkh (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 94,320,551 - 94,342,161 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 94,320,580 - 94,341,975 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 94,413,243 - 94,434,854 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 94,413,273 - 94,434,668 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 94,217,240 - 94,235,421 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 94,498,722 - 94,518,054 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 95,858,144 - 95,876,325 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | F2.1 | NCBI | | | | | cM Map | 3 | 40.62 | NCBI | | | | |
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TDRKH (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 151,766,486 - 151,790,534 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 151,770,107 - 151,791,416 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 151,744,044 - 151,763,010 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 150,010,664 - 150,029,634 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 148,557,115 - 148,576,071 | NCBI | | | | | Celera | 1 | 124,858,715 - 124,877,693 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q21.3 | NCBI | | | | | HuRef | 1 | 123,120,939 - 123,139,873 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 153,139,168 - 153,158,334 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 150,889,872 - 150,914,019 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tdrkh (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 184,736,255 - 184,760,534 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 182,049,175 - 182,071,516 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 182,049,215 - 182,070,755 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 189,712,414 - 189,733,897 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 187,516,655 - 187,538,169 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 182,344,882 - 182,366,365 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 195,649,813 - 195,674,217 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 195,651,930 - 195,674,616 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 215,130,507 - 215,152,911 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 189,384,598 - 189,406,184 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 189,334,719 - 189,351,762 (+) | NCBI | | | | | Celera | 2 | 174,599,591 - 174,620,986 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q34 | NCBI | | | | |
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Tdrkh (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955589 | 631,462 - 649,936 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955589 | 630,989 - 649,936 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TDRKH (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 98,032,230 - 98,051,946 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 97,783,329 - 97,803,137 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 127,128,857 - 127,149,197 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 130,772,891 - 130,792,942 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 130,774,515 - 130,792,942 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TDRKH (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 17 | 60,794,937 - 60,807,852 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 60,795,813 - 60,805,449 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 60,236,314 - 60,248,221 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 61,811,520 - 61,823,418 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 61,811,508 - 61,825,743 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 60,638,277 - 60,650,172 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 60,724,607 - 60,736,336 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 61,453,522 - 61,465,433 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tdrkh (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 22,937,417 - 22,951,740 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936580 | 1,967,639 - 1,982,134 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936580 | 1,968,001 - 1,982,073 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TDRKH (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 4 | 97,415,914 - 97,438,691 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 97,415,891 - 97,438,262 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 106,438,836 - 106,461,263 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TDRKH (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 11,895,882 - 11,916,981 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 11,896,380 - 11,916,031 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 11,455,327 - 11,489,647 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tdrkh (Heterocephalus glaber - naked mole-rat) |
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