D430041D05Rik (RIKEN cDNA D430041D05 gene) - Rat Genome Database

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Gene: D430041D05Rik (RIKEN cDNA D430041D05 gene) Mus musculus
Analyze
Symbol: D430041D05Rik
Name: RIKEN cDNA D430041D05 gene
RGD ID: 1321843
MGI Page MGI
Description: Is expressed in nervous system; neural retina; thymus; and upper jaw molar. Orthologous to human KIAA1549L (KIAA1549 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9630056G07Rik; G2; hypothetical protein LOC241589; RP24-297H17.3; uncharacterized protein LOC241589; UPF0606 protein KIAA1549L homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392103,973,418 - 104,242,595 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2103,973,418 - 104,241,358 (-)EnsemblGRCm39 Ensembl
GRCm382104,143,073 - 104,411,870 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2104,143,073 - 104,411,013 (-)EnsemblGRCm38mm10GRCm38
MGSCv372103,983,230 - 104,250,491 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362103,943,917 - 103,947,228 (-)NCBIMGSCv36mm8
Celera2105,376,515 - 105,647,702 (-)NCBICelera
Cytogenetic Map2E2NCBI
cM Map254.59NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7659517   PMID:8889548   PMID:10349636   PMID:10568747   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11889558   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:21267068  


Genomics

Comparative Map Data
D430041D05Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392103,973,418 - 104,242,595 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2103,973,418 - 104,241,358 (-)EnsemblGRCm39 Ensembl
GRCm382104,143,073 - 104,411,870 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2104,143,073 - 104,411,013 (-)EnsemblGRCm38mm10GRCm38
MGSCv372103,983,230 - 104,250,491 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362103,943,917 - 103,947,228 (-)NCBIMGSCv36mm8
Celera2105,376,515 - 105,647,702 (-)NCBICelera
Cytogenetic Map2E2NCBI
cM Map254.59NCBI
KIAA1549L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381133,376,108 - 33,674,102 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1133,376,108 - 33,674,102 (+)EnsemblGRCh38hg38GRCh38
GRCh371133,397,654 - 33,695,648 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361133,520,453 - 33,652,224 (+)NCBINCBI36Build 36hg18NCBI36
Celera1133,710,111 - 33,843,151 (+)NCBICelera
Cytogenetic Map11p13NCBI
HuRef1133,258,783 - 33,392,292 (+)NCBIHuRef
CHM1_11133,563,238 - 33,695,161 (+)NCBICHM1_1
T2T-CHM13v2.01133,511,580 - 33,811,113 (+)NCBIT2T-CHM13v2.0
D430041D05Rikl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83110,961,478 - 111,237,308 (-)NCBIGRCr8
mRatBN7.2390,506,559 - 90,782,427 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl390,510,942 - 90,781,894 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0394,058,546 - 94,334,805 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl394,064,234 - 94,182,714 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03100,697,330 - 100,970,842 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4389,280,382 - 89,731,855 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera389,567,573 - 89,842,755 (-)NCBICelera
Cytogenetic Map3q32NCBI
Kiaa1549l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542212,557,958 - 12,822,396 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542212,554,879 - 12,676,904 (-)NCBIChiLan1.0ChiLan1.0
KIAA1549L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2935,596,919 - 35,893,520 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11135,601,081 - 35,898,204 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01133,348,954 - 33,646,081 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11133,232,137 - 33,527,879 (+)NCBIpanpan1.1PanPan1.1panPan2
KIAA1549L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11834,019,867 - 34,286,314 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1834,028,430 - 34,286,589 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1833,633,108 - 33,770,614 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01834,637,540 - 34,775,474 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1834,640,519 - 34,897,446 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11834,197,477 - 34,345,209 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01833,790,668 - 33,928,439 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01834,425,987 - 34,563,997 (-)NCBIUU_Cfam_GSD_1.0
Kiaa1549l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494731,166,609 - 31,309,322 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365334,297,596 - 4,401,948 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365334,294,314 - 4,401,347 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA1549L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl227,238,425 - 27,559,432 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1227,237,646 - 27,366,841 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2229,617,451 - 29,746,696 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA1549L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1131,624,493 - 31,925,520 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl131,630,430 - 31,753,965 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038128,716,939 - 129,014,361 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa1549l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476713,545,782 - 13,838,392 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476713,539,975 - 13,838,387 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in D430041D05Rik
9374 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:6626
Count of miRNA genes:974
Interacting mature miRNAs:1440
Transcripts:ENSMUST00000089726, ENSMUST00000136156, ENSMUST00000139015, ENSMUST00000141159, ENSMUST00000149165, ENSMUST00000149466, ENSMUST00000155458, ENSMUST00000156278
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
4142088Parms1_mpatched associated RMS 1 (mouse)Not determined74524117114123532Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
1301374Cplaq7_mcircadian period of locomotor activity 7 (mouse)Not determined276421483110421651Mouse
10043894Bw22_mbody weight QTL 22 (mouse)Not determined280895334114895334Mouse
15092054Egrme5_mearly growth rate, maternal effect 5 (mouse)282190187118004745Mouse
1558901Skmw8_mskeletal muscle weight 8 (mouse)Not determined284008488118008593Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
11049565Lmr28g_mleishmaniasis resistance 28g (mouse)286095716120095823Mouse
11038697Ltpr2d_mLeishmania tropica response 2d (mouse)286095716120095823Mouse
11038698Ltpr2c_mLeishmania tropica response 2c (mouse)286095716120095823Mouse
1300852Lmr14_mleishmaniasis resistance 14 (mouse)Not determined286095716120095823Mouse
1301834Bits1_mbitterness sensitivity 1 (mouse)Not determined287440643121440778Mouse
11532731Sluc31a_msusceptibility to lung cancer 31a (mouse)288015003122015170Mouse
4142223Femwf4_mfemur work to failure 4 (mouse)Not determined88143423122143570Mouse
1301098Cd8mts3_mCD8 memory T cell subset 3 (mouse)Not determined291089974125090104Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
4141448Mpaps1_mmicrophthalmia anophthalmia susceptibility 1 (mouse)Not determined97028557112115196Mouse
11049569Lmr28d_mleishmaniasis resistance 28d (mouse)297123370131123532Mouse
11049568Lmr28c_mleishmaniasis resistance 28c (mouse)297123370131123532Mouse
12904935Edlmmq2_mextensor digitorum longus muscle mass QTL 2 (mouse)297210364131210364Mouse
12904954Gmmq2_mgastrocnemius muscle mass QTL 2 (mouse)297210364131210364Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
11041906Lmr28a_mleishmaniasis resistance 28a (mouse)2103095716129213005Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse

Markers in Region
D2Mit385  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382104,174,232 - 104,174,328UniSTSGRCm38
MGSCv372104,014,389 - 104,014,485UniSTSGRCm37
Celera2105,406,987 - 105,407,081UniSTS
Cytogenetic Map2E2UniSTS
cM Map247.5UniSTS
Whitehead Genetic250.3UniSTS
Whitehead_YAC2 UniSTS
D2Ucl10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382104,362,137 - 104,362,437UniSTSGRCm38
MGSCv372104,202,294 - 104,202,594UniSTSGRCm37
Celera2105,599,387 - 105,599,691UniSTS
Cytogenetic Map2E2UniSTS
cM Map260.0UniSTS
AU022121  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382104,199,516 - 104,199,733UniSTSGRCm38
MGSCv372104,039,673 - 104,039,890UniSTSGRCm37
Celera2105,432,167 - 105,432,384UniSTS
Cytogenetic Map2E2UniSTS
cM Map257.9UniSTS
Whitehead/MRC_RH21398.71UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001033347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001368844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001419546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006499487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_866274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI606651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI845358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL954370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB646253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC096034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF464989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX517992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX813317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN457086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX239849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X84016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000089726   ⟹   ENSMUSP00000106756
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,973,418 - 104,240,679 (-)Ensembl
GRCm38.p6 Ensembl2104,143,073 - 104,410,334 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136156   ⟹   ENSMUSP00000155023
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,973,418 - 104,240,679 (-)Ensembl
GRCm38.p6 Ensembl2104,143,073 - 104,410,334 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141159   ⟹   ENSMUSP00000117041
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,973,418 - 104,240,679 (-)Ensembl
GRCm38.p6 Ensembl2104,143,073 - 104,410,334 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149165
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2104,038,011 - 104,088,329 (-)Ensembl
GRCm38.p6 Ensembl2104,207,666 - 104,257,984 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155458
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,982,525 - 103,988,764 (-)Ensembl
GRCm38.p6 Ensembl2104,152,180 - 104,158,419 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156278
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2104,015,332 - 104,071,528 (-)Ensembl
GRCm38.p6 Ensembl2104,184,987 - 104,241,183 (-)Ensembl
RefSeq Acc Id: ENSMUST00000230671   ⟹   ENSMUSP00000155485
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2103,973,418 - 104,241,358 (-)Ensembl
GRCm38.p6 Ensembl2104,143,073 - 104,411,013 (-)Ensembl
RefSeq Acc Id: NM_001033347   ⟹   NP_001028519
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,973,418 - 104,240,679 (-)NCBI
GRCm382104,143,073 - 104,410,334 (-)NCBI
MGSCv372103,983,230 - 104,250,491 (-)RGD
Celera2105,376,515 - 105,647,702 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001368844   ⟹   NP_001355773
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,973,421 - 104,240,956 (-)NCBI
GRCm382104,143,076 - 104,410,611 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001419546   ⟹   NP_001406475
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,973,418 - 104,240,956 (-)NCBI
RefSeq Acc Id: XM_006499487   ⟹   XP_006499550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,973,430 - 104,242,595 (-)NCBI
GRCm382104,143,073 - 104,411,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239526   ⟹   XP_011237828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,973,418 - 104,242,595 (-)NCBI
GRCm382104,143,073 - 104,411,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239527   ⟹   XP_011237829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392103,973,418 - 104,242,595 (-)NCBI
GRCm382104,143,073 - 104,411,870 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011239528   ⟹   XP_011237830
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392104,015,978 - 104,242,595 (-)NCBI
GRCm382104,185,633 - 104,411,870 (-)NCBI
Sequence:
RefSeq Acc Id: XR_866274
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392104,022,780 - 104,242,595 (-)NCBI
GRCm382104,192,435 - 104,411,870 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001028519   ⟸   NM_001033347
- Peptide Label: isoform 2
- UniProtKB: D3YZ21 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006499550   ⟸   XM_006499487
- Peptide Label: isoform X5
- UniProtKB: F6ZGR6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237829   ⟸   XM_011239527
- Peptide Label: isoform X2
- UniProtKB: A0A2R8VKG2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237828   ⟸   XM_011239526
- Peptide Label: isoform X1
- UniProtKB: A0A2R8VKG2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237830   ⟸   XM_011239528
- Peptide Label: isoform X4
- UniProtKB: A0A2R8VKG2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001355773   ⟸   NM_001368844
- Peptide Label: isoform 1
- UniProtKB: A0A2R8VHF1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000155485   ⟸   ENSMUST00000230671
RefSeq Acc Id: ENSMUSP00000106756   ⟸   ENSMUST00000089726
RefSeq Acc Id: ENSMUSP00000155023   ⟸   ENSMUST00000136156
RefSeq Acc Id: ENSMUSP00000117041   ⟸   ENSMUST00000141159
RefSeq Acc Id: NP_001406475   ⟸   NM_001419546
- Peptide Label: isoform 3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A2R8VKG2-F1-model_v2 AlphaFold A0A2R8VKG2 1-2099 view protein structure

Promoters
RGD ID:6832606
Promoter ID:MM_KWN:30824
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000035469,   OTTMUST00000035471
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362104,097,781 - 104,098,281 (-)MPROMDB
RGD ID:6878100
Promoter ID:EPDNEW_M2501
Type:single initiation site
Name:D430041D05Rik_1
Description:Mus musculus RIKEN cDNA D430041D05 gene , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382104,230,570 - 104,230,630EPDNEW
RGD ID:6831137
Promoter ID:MM_KWN:30827
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000089726,   OTTMUST00000035481,   OTTMUST00000035482
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362104,250,471 - 104,250,971 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2181743 AgrOrtholog
Ensembl Genes ENSMUSG00000068373 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000089726 ENTREZGENE
  ENSMUST00000089726.10 UniProtKB/TrEMBL
  ENSMUST00000136156 ENTREZGENE
  ENSMUST00000136156.9 UniProtKB/TrEMBL
  ENSMUST00000141159 ENTREZGENE
  ENSMUST00000141159.9 UniProtKB/TrEMBL
  ENSMUST00000230671 ENTREZGENE
  ENSMUST00000230671.2 UniProtKB/TrEMBL
InterPro DUF3827 UniProtKB/TrEMBL
KEGG Report mmu:241589 UniProtKB/TrEMBL
MGD MGI:2181743 ENTREZGENE
NCBI Gene 241589 ENTREZGENE
PANTHER PTHR21590 UniProtKB/TrEMBL
  UPF0606 PROTEIN KIAA1549L UniProtKB/TrEMBL
Pfam DUF3827 UniProtKB/TrEMBL
PhenoGen D430041D05Rik PhenoGen
UniProt A0A2R8VHF1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8VKG2 ENTREZGENE, UniProtKB/TrEMBL
  D3YZ21 ENTREZGENE, UniProtKB/TrEMBL
  F6ZGR6 ENTREZGENE, UniProtKB/TrEMBL
  Q3UUT6_MOUSE UniProtKB/TrEMBL
  Q8BXF0_MOUSE UniProtKB/TrEMBL