Ndufaf5 (NADH:ubiquinone oxidoreductase complex assembly factor 5) - Rat Genome Database

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Gene: Ndufaf5 (NADH:ubiquinone oxidoreductase complex assembly factor 5) Mus musculus
Analyze
Symbol: Ndufaf5
Name: NADH:ubiquinone oxidoreductase complex assembly factor 5
RGD ID: 1320380
MGI Page MGI
Description: Predicted to enable S-adenosylmethionine-dependent methyltransferase activity and oxidoreductase activity. Predicted to be involved in mitochondrial respiratory chain complex I assembly. Predicted to act upstream of or within methylation. Located in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 16. Orthologous to human NDUFAF5 (NADH:ubiquinone oxidoreductase complex assembly factor 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310003L22Rik; arginine-hydroxylase NDUFAF5, mitochondrial; NADH dehydrogenase (ubiquinone) complex I, assembly factor 5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5; probable methyltransferase C20orf7 homolog, mitochondrial; putative methyltransferase NDUFAF5; RP23-139H14.1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392140,012,504 - 140,047,172 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2140,012,569 - 140,045,609 (+)EnsemblGRCm39 Ensembl
GRCm382140,170,584 - 140,218,965 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2140,170,649 - 140,203,689 (+)EnsemblGRCm38mm10GRCm38
MGSCv372139,996,382 - 140,030,988 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362139,862,471 - 139,895,073 (+)NCBIMGSCv36mm8
Celera2141,356,217 - 141,391,065 (+)NCBICelera
Cytogenetic Map2F3NCBI
cM Map269.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16602821  
PMID:17967808   PMID:18614015   PMID:18799693   PMID:21873635  


Genomics

Comparative Map Data
Ndufaf5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392140,012,504 - 140,047,172 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2140,012,569 - 140,045,609 (+)EnsemblGRCm39 Ensembl
GRCm382140,170,584 - 140,218,965 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2140,170,649 - 140,203,689 (+)EnsemblGRCm38mm10GRCm38
MGSCv372139,996,382 - 140,030,988 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362139,862,471 - 139,895,073 (+)NCBIMGSCv36mm8
Celera2141,356,217 - 141,391,065 (+)NCBICelera
Cytogenetic Map2F3NCBI
cM Map269.2NCBI
NDUFAF5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382013,785,028 - 13,821,580 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2013,785,007 - 13,821,580 (+)EnsemblGRCh38hg38GRCh38
GRCh372013,765,674 - 13,802,226 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362013,713,682 - 13,745,874 (+)NCBINCBI36Build 36hg18NCBI36
Celera2013,835,718 - 13,869,123 (+)NCBICelera
Cytogenetic Map20p12.1NCBI
HuRef2013,720,309 - 13,753,711 (+)NCBIHuRef
CHM1_12013,765,617 - 13,799,023 (+)NCBICHM1_1
T2T-CHM13v2.02013,828,747 - 13,865,323 (+)NCBIT2T-CHM13v2.0
Ndufaf5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83147,961,612 - 147,991,128 (+)NCBIGRCr8
mRatBN7.23127,507,931 - 127,537,477 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3127,507,941 - 127,537,477 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3131,371,136 - 131,400,649 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03139,955,232 - 139,984,745 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03137,658,373 - 137,687,888 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03133,232,412 - 133,261,932 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3133,232,432 - 133,261,973 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03139,688,300 - 139,717,717 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43128,353,866 - 128,384,213 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13128,259,473 - 128,289,786 (+)NCBI
Celera3126,154,809 - 126,184,287 (+)NCBICelera
Cytogenetic Map3q41NCBI
Ndufaf5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541523,221,084 - 23,262,073 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541523,221,084 - 23,263,548 (+)NCBIChiLan1.0ChiLan1.0
NDUFAF5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22114,679,233 - 14,715,055 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12014,675,994 - 14,724,032 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02013,751,315 - 13,788,024 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12013,735,768 - 13,769,147 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2013,735,798 - 13,768,671 (+)Ensemblpanpan1.1panPan2
NDUFAF5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1248,810,682 - 8,873,212 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl248,837,253 - 8,873,176 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha248,621,611 - 8,684,816 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0249,249,725 - 9,285,751 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl249,247,744 - 9,285,708 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1248,822,205 - 8,885,310 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0248,918,663 - 8,981,572 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0249,267,158 - 9,330,256 (-)NCBIUU_Cfam_GSD_1.0
Ndufaf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640157,563,024 - 157,593,648 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364855,992,668 - 6,025,467 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364855,994,388 - 6,025,042 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFAF5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1722,480,340 - 22,511,180 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11722,480,344 - 22,508,804 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21725,160,198 - 25,188,788 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFAF5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1242,670,613 - 42,706,341 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl242,670,421 - 42,711,024 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660542,946,890 - 2,982,616 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufaf5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474114,778,109 - 14,823,893 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474114,778,126 - 14,824,079 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ndufaf5
952 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:182
Count of miRNA genes:137
Interacting mature miRNAs:141
Transcripts:ENSMUST00000044825, ENSMUST00000123078, ENSMUST00000125913
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106233580140233729Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107255676141255676Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111551028145551163Mouse
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112212746146213005Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112212746146213005Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115212857149212994Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
1300712El2_mepilepsy 2 (mouse)Not determined2122207146142532135Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
1301066Otx2m2_morthodenticle homolog 2 (Drosophila) modifier 2 (mouse)Not determined2123231973148700377Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
1300647Nktcn2_mnatural killer T cell numbers 2 (mouse)Not determined2138737416145893953Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_027093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011239768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003953715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003953716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004940725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK009123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL844528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY242834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD363717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000044825   ⟹   ENSMUSP00000035325
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2140,012,569 - 140,045,609 (+)Ensembl
GRCm38.p6 Ensembl2140,170,649 - 140,203,689 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123078
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2140,012,633 - 140,014,234 (+)Ensembl
GRCm38.p6 Ensembl2140,170,713 - 140,172,314 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125913
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2140,012,950 - 140,045,552 (+)Ensembl
GRCm38.p6 Ensembl2140,171,030 - 140,203,632 (+)Ensembl
RefSeq Acc Id: NM_027093   ⟹   NP_081369
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,566 - 140,047,172 (+)NCBI
GRCm382140,170,646 - 140,205,252 (+)NCBI
MGSCv372139,996,382 - 140,030,988 (+)RGD
Celera2141,356,217 - 141,391,065 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011239768   ⟹   XP_011238070
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,543 - 140,046,341 (+)NCBI
GRCm382140,170,631 - 140,204,421 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252052   ⟹   XP_030107912
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,584 - 140,045,560 (+)NCBI
GRCm382140,170,650 - 140,203,640 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252053   ⟹   XP_030107913
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,583 - 140,045,606 (+)NCBI
GRCm382140,170,650 - 140,203,640 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036162537   ⟹   XP_036018430
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,602 - 140,045,606 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003953715
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,504 - 140,045,560 (+)NCBI
GRCm382140,170,584 - 140,218,965 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003953716
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,504 - 140,045,554 (+)NCBI
GRCm382140,170,584 - 140,216,983 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004940725
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392140,012,504 - 140,045,560 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_081369   ⟸   NM_027093
- Peptide Label: precursor
- UniProtKB: Q9D7L6 (UniProtKB/Swiss-Prot),   A2APY7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011238070   ⟸   XM_011239768
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030107913   ⟸   XM_030252053
- Peptide Label: isoform X2
RefSeq Acc Id: XP_030107912   ⟸   XM_030252052
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000035325   ⟸   ENSMUST00000044825
RefSeq Acc Id: XP_036018430   ⟸   XM_036162537
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2APY7-F1-model_v2 AlphaFold A2APY7 1-343 view protein structure

Promoters
RGD ID:6831336
Promoter ID:MM_KWN:31966
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000028863,   NM_027093,   OTTMUST00000037019,   OTTMUST00000037048,   OTTMUST00000037049
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362139,996,121 - 139,996,621 (-)MPROMDB
RGD ID:6878936
Promoter ID:EPDNEW_M2919
Type:initiation region
Name:Ndufaf5_1
Description:Mus musculus NADH dehydrogenase complex I, assembly factor 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2920  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382140,170,666 - 140,170,726EPDNEW
RGD ID:6878938
Promoter ID:EPDNEW_M2920
Type:single initiation site
Name:Ndufaf5_2
Description:Mus musculus NADH dehydrogenase complex I, assembly factor 5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M2919  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382140,171,032 - 140,171,092EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1916737 AgrOrtholog
Ensembl Genes ENSMUSG00000027384 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000044825 ENTREZGENE
  ENSMUST00000044825.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.150 UniProtKB/Swiss-Prot
InterPro Methyltransf_11 UniProtKB/Swiss-Prot
  SAM-dependent_MTases UniProtKB/Swiss-Prot
KEGG Report mmu:69487 UniProtKB/Swiss-Prot
MGD MGI:1916737 ENTREZGENE
NCBI Gene 69487 ENTREZGENE
PANTHER ARGININE-HYDROXYLASE NDUFAF5, MITOCHONDRIAL UniProtKB/Swiss-Prot
  UNCHARACTERIZED UniProtKB/Swiss-Prot
Pfam Methyltransf_11 UniProtKB/Swiss-Prot
PhenoGen Ndufaf5 PhenoGen
Superfamily-SCOP SSF53335 UniProtKB/Swiss-Prot
UniProt A2APY7 ENTREZGENE, UniProtKB/Swiss-Prot
  Q9D7L6 ENTREZGENE
UniProt Secondary Q9D7L6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-22 Ndufaf5  NADH:ubiquinone oxidoreductase complex assembly factor 5    NADH dehydrogenase (ubiquinone) complex I, assembly factor 5  Symbol and/or name change 5135510 APPROVED
2012-09-19 Ndufaf5  NADH dehydrogenase (ubiquinone) complex I, assembly factor 5  2310003L22Rik  RIKEN cDNA 2310003L22 gene  Symbol and/or name change 5135510 APPROVED