Kctd12 (potassium channel tetramerisation domain containing 12) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Kctd12 (potassium channel tetramerisation domain containing 12) Mus musculus
Analyze
Symbol: Kctd12
Name: potassium channel tetramerisation domain containing 12
RGD ID: 1319756
MGI Page MGI
Description: Enables G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential and G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential. Acts upstream of or within regulation of G protein-coupled receptor signaling pathway. Located in postsynaptic membrane and presynaptic membrane. Part of receptor complex. Is active in GABA-ergic synapse and presynaptic active zone membrane. Is expressed in several structures, including central nervous system; eye; genitourinary system; gut; and inner ear. Orthologous to human KCTD12 (potassium channel tetramerization domain containing 12).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU046135; AW538430; BTB/POZ domain-containing protein KCTD12; Pfe; Pfet; Pfet1; Pfetin; potassium channel tetramerization domain containing 12; predominantly fetal expressed T1 domain
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914103,214,017 - 103,220,073 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14103,214,017 - 103,220,073 (-)EnsemblGRCm39 Ensembl
GRCm3814102,976,581 - 102,982,637 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14102,976,581 - 102,982,637 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714103,375,798 - 103,381,854 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614101,864,140 - 101,869,137 (-)NCBIMGSCv36mm8
Celera14101,609,268 - 101,615,325 (-)NCBICelera
Cytogenetic Map14E2.3NCBI
cM Map1451.55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
3,3',5-triiodo-L-thyronine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
8-Br-cAMP  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (EXP,ISO)
Benzo[k]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
cadmium dichloride  (EXP)
calcitriol  (ISO)
cannabidiol  (EXP)
carbon nanotube  (EXP)
cisplatin  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (ISO)
cytarabine  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
diethylstilbestrol  (EXP)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
entinostat  (ISO)
enzyme inhibitor  (ISO)
ethanol  (ISO)
folic acid  (EXP)
fulvestrant  (ISO)
gemcitabine  (ISO)
genistein  (EXP)
hexadecanoic acid  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
ketoconazole  (ISO)
lipopolysaccharide  (EXP,ISO)
mercury dibromide  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-nitrosodiethylamine  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
pentanal  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
pravastatin  (EXP,ISO)
progesterone  (EXP,ISO)
protein kinase inhibitor  (ISO)
raloxifene  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
serpentine asbestos  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
succimer  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
troglitazone  (EXP)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:15345747   PMID:15357420   PMID:15368895   PMID:15747579   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:17114649   PMID:18973680   PMID:20400944   PMID:21267068   PMID:21452234   PMID:21873635   PMID:22794259   PMID:23312518   PMID:23341629   PMID:23843457  
PMID:24154525   PMID:24836506   PMID:24952961   PMID:25065880   PMID:25689571   PMID:27899360   PMID:28003345   PMID:28378742   PMID:28671696   PMID:31040226   PMID:31073041   PMID:32325033  
PMID:32581705   PMID:33285230   PMID:33913808   PMID:34321999   PMID:35017224   PMID:36417873  


Genomics

Comparative Map Data
Kctd12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914103,214,017 - 103,220,073 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14103,214,017 - 103,220,073 (-)EnsemblGRCm39 Ensembl
GRCm3814102,976,581 - 102,982,637 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14102,976,581 - 102,982,637 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714103,375,798 - 103,381,854 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614101,864,140 - 101,869,137 (-)NCBIMGSCv36mm8
Celera14101,609,268 - 101,615,325 (-)NCBICelera
Cytogenetic Map14E2.3NCBI
cM Map1451.55NCBI
KCTD12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381376,880,175 - 76,886,405 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1376,880,175 - 76,886,405 (-)EnsemblGRCh38hg38GRCh38
GRCh371377,454,310 - 77,460,540 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361376,352,305 - 76,358,541 (-)NCBINCBI36Build 36hg18NCBI36
Build 341376,352,312 - 76,358,526NCBI
Celera1358,352,296 - 58,358,541 (-)NCBICelera
Cytogenetic Map13q22.3NCBI
HuRef1358,151,993 - 58,158,238 (-)NCBIHuRef
CHM1_11377,422,214 - 77,428,462 (-)NCBICHM1_1
T2T-CHM13v2.01376,103,834 - 76,110,076 (-)NCBIT2T-CHM13v2.0
Kctd12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81586,214,786 - 86,220,725 (-)NCBIGRCr8
mRatBN7.21579,800,078 - 79,806,017 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1579,801,191 - 79,806,282 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1583,784,596 - 83,790,535 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01584,907,607 - 84,913,548 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01581,835,232 - 81,841,173 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01587,384,632 - 87,390,627 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01590,884,584 - 90,890,565 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41586,986,827 - 86,987,810NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1578,950,071 - 78,956,067 (-)NCBICelera
Cytogenetic Map15q21NCBI
Kctd12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540430,325,144 - 30,326,121 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540430,325,019 - 30,330,953 (+)NCBIChiLan1.0ChiLan1.0
KCTD12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21478,449,404 - 78,460,907 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11377,045,536 - 77,057,044 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01358,097,764 - 58,104,972 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11377,141,611 - 77,147,172 (-)NCBIpanpan1.1PanPan1.1panPan2
KCTD12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12230,506,906 - 30,508,782 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2230,503,932 - 30,508,632 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2230,363,633 - 30,369,895 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02230,814,574 - 30,820,852 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12230,482,086 - 30,488,335 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02230,520,448 - 30,526,697 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02230,589,920 - 30,596,172 (-)NCBIUU_Cfam_GSD_1.0
Kctd12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945128,972,357 - 128,978,403 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365114,389,755 - 4,390,738 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365114,389,558 - 4,395,630 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCTD12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1149,025,131 - 49,031,309 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11149,025,134 - 49,033,208 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21153,668,328 - 53,669,623 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCTD12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1355,970,438 - 55,973,640 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl355,972,438 - 55,973,415 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604612,175,983 - 12,182,244 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kctd12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475123,574,456 - 23,575,433 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475123,574,254 - 23,580,266 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kctd12
194 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1242
Count of miRNA genes:603
Interacting mature miRNAs:713
Transcripts:ENSMUST00000060692, ENSMUST00000183756, ENSMUST00000184744
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
14747006Mancz12_mmandible centroid size 12 (mouse)1470071977104071977Mouse
10054475Ossc3_mosteosarcoma susceptibility 3 (mouse)Not determined1470863768104863926Mouse
1300551Lprm3_mlymphoproliferation modifier 3 (mouse)Not determined1471221224105221344Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse

Markers in Region
AW538430  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3814102,977,176 - 102,977,275UniSTSGRCm38
MGSCv3714103,376,393 - 103,376,492UniSTSGRCm37
Celera14101,609,863 - 101,609,962UniSTS
Cytogenetic Map14E2.3UniSTS
Whitehead/MRC_RH141083.8UniSTS
AU046135  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3814102,976,652 - 102,976,925UniSTSGRCm38
MGSCv3714103,375,869 - 103,376,142UniSTSGRCm37
Celera14101,609,339 - 101,609,612UniSTS
Cytogenetic Map14E2.3UniSTS
Whitehead/MRC_RH141084.24UniSTS
Kctd12  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381181,176,396 - 181,176,789UniSTSGRCm38
MGSCv371183,106,527 - 183,106,920UniSTSGRCm37
Celera1188,243,282 - 188,243,675UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map14E2.3UniSTS
cM Map14 UniSTS
Kctd12  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map14E2.3UniSTS
cM Map14 UniSTS
Kctd12  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1H4UniSTS
Cytogenetic Map14E2.3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_177715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK035535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY267461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC116647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC116648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP753689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF538046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY467419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY467420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000183756
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14103,214,973 - 103,218,987 (-)Ensembl
GRCm38.p6 Ensembl14102,977,537 - 102,981,551 (-)Ensembl
RefSeq Acc Id: ENSMUST00000184744   ⟹   ENSMUSP00000139261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14103,214,017 - 103,220,073 (-)Ensembl
GRCm38.p6 Ensembl14102,976,581 - 102,982,637 (-)Ensembl
RefSeq Acc Id: NM_177715   ⟹   NP_808383
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914103,214,017 - 103,220,073 (-)NCBI
GRCm3814102,976,581 - 102,982,637 (-)ENTREZGENE
MGSCv3714103,375,798 - 103,381,854 (-)RGD
Celera14101,609,268 - 101,615,325 (-)RGD
cM Map14 ENTREZGENE
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_808383   ⟸   NM_177715
- UniProtKB: Q3T9E3 (UniProtKB/Swiss-Prot),   Q6WVG3 (UniProtKB/Swiss-Prot),   A0A0R4J2B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000139261   ⟸   ENSMUST00000184744
Protein Domains
BTB   Potassium channel tetramerisation-type BTB

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6WVG3-F1-model_v2 AlphaFold Q6WVG3 1-327 view protein structure

Promoters
RGD ID:8683134
Promoter ID:EPDNEW_M19598
Type:multiple initiation site
Name:Kctd12_1
Description:Mus musculus potassium channel tetramerisation domain containing12 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3814102,982,637 - 102,982,697EPDNEW
RGD ID:6825123
Promoter ID:MM_KWN:17662
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000060692,   NM_177715
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3614103,379,086 - 103,382,457 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2145823 AgrOrtholog
Ensembl Genes ENSMUSG00000048107
  ENSMUSG00000098557 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000184744 ENTREZGENE
  ENSMUST00000184744.2 UniProtKB/TrEMBL
InterPro BTB/POZ_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:239217 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2145823 ENTREZGENE
NCBI Gene 239217 ENTREZGENE
PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN KCTD12 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Kctd12 PhenoGen
SMART BTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J2B2 ENTREZGENE, UniProtKB/TrEMBL
  KCD12_MOUSE UniProtKB/Swiss-Prot
  Q14AX3_MOUSE UniProtKB/TrEMBL
  Q3T9E3 ENTREZGENE
  Q69ZA6_MOUSE UniProtKB/TrEMBL
  Q6WVG3 ENTREZGENE
  Q8C2V2_MOUSE UniProtKB/TrEMBL
  Q8CBQ4_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3T9E3 UniProtKB/Swiss-Prot