Tasor (transcription activation suppressor) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Tasor (transcription activation suppressor) Mus musculus
Analyze
Symbol: Tasor
Name: transcription activation suppressor
RGD ID: 1318652
MGI Page MGI
Description: Predicted to enable chromatin binding activity. Involved in anterior/posterior axis specification, embryo and mesodermal to mesenchymal transition involved in gastrulation. Predicted to be located in chromosome and nucleus. Predicted to be part of heterochromatin. Predicted to be active in nucleoplasm. Is expressed in brain. Orthologous to human TASOR (transcription activation suppressor).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4732418E12; 4933409E02Rik; D14Abb1; D14Abb1e; Fam20; Fam208a; family with sequence similarity 208, member A; MommeD; MommeD6; retinoblastoma-associated protein 140; uncharacterized protein C3orf63 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391427,150,759 - 27,205,512 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1427,150,791 - 27,205,512 (+)EnsemblGRCm39 Ensembl
GRCm381427,423,674 - 27,483,555 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1427,428,834 - 27,483,555 (+)EnsemblGRCm38mm10GRCm38
MGSCv371428,242,033 - 28,296,741 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361426,255,608 - 26,310,439 (+)NCBIMGSCv36mm8
Celera1423,660,480 - 23,715,175 (+)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1416.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cellular_component  (ND)
chromosome  (IEA)
heterochromatin  (IBA,ISO)
nucleoplasm  (IBA,ISO)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8858346   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273  
PMID:15368895   PMID:15582152   PMID:15890782   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:19099580   PMID:21873635   PMID:24781204   PMID:28839193   PMID:32325033  
PMID:34216590   PMID:38355793  


Genomics

Comparative Map Data
Tasor
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391427,150,759 - 27,205,512 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1427,150,791 - 27,205,512 (+)EnsemblGRCm39 Ensembl
GRCm381427,423,674 - 27,483,555 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1427,428,834 - 27,483,555 (+)EnsemblGRCm38mm10GRCm38
MGSCv371428,242,033 - 28,296,741 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361426,255,608 - 26,310,439 (+)NCBIMGSCv36mm8
Celera1423,660,480 - 23,715,175 (+)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1416.51NCBI
TASOR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38356,620,132 - 56,683,265 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl356,620,132 - 56,683,265 (-)EnsemblGRCh38hg38GRCh38
GRCh37356,654,160 - 56,717,293 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36356,629,607 - 56,673,399 (-)NCBINCBI36Build 36hg18NCBI36
Celera356,619,895 - 56,682,857 (-)NCBICelera
Cytogenetic Map3p14.3NCBI
HuRef356,702,553 - 56,765,594 (-)NCBIHuRef
CHM1_1356,604,896 - 56,667,842 (-)NCBICHM1_1
T2T-CHM13v2.0356,660,459 - 56,723,580 (-)NCBIT2T-CHM13v2.0
Tasor
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8162,612,942 - 2,669,870 (+)NCBIGRCr8
mRatBN7.2162,606,807 - 2,669,902 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl162,603,936 - 2,667,292 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0163,050,506 - 3,108,168 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl163,051,449 - 3,105,531 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0163,017,901 - 3,075,976 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4162,691,237 - 2,747,457 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera162,569,234 - 2,628,004 (+)NCBICelera
Cytogenetic Map16p16NCBI
Tasor
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554306,442,084 - 6,480,802 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554306,440,655 - 6,480,956 (-)NCBIChiLan1.0ChiLan1.0
TASOR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2256,606,887 - 56,670,573 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1356,614,384 - 56,675,342 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0356,555,945 - 56,619,151 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1357,771,656 - 57,834,077 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl357,771,656 - 57,834,077 (-)Ensemblpanpan1.1panPan2
TASOR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12033,665,231 - 33,713,264 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2033,646,000 - 33,712,936 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2033,591,814 - 33,640,748 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02033,936,185 - 33,985,074 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2033,917,423 - 33,984,947 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12033,380,285 - 33,429,195 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02033,740,655 - 33,788,708 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02033,913,787 - 33,962,494 (+)NCBIUU_Cfam_GSD_1.0
Tasor
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118173,915,956 - 173,960,041 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364737,055,462 - 7,098,358 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364737,053,797 - 7,098,608 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TASOR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1338,492,472 - 38,557,193 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11338,491,048 - 38,557,256 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21342,336,600 - 42,403,699 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TASOR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12217,957,264 - 18,020,887 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2217,960,845 - 18,020,653 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041148,851,301 - 148,914,950 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tasor
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624822565,559 - 624,710 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624822577,840 - 626,126 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tasor
1767 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:811
Count of miRNA genes:463
Interacting mature miRNAs:562
Transcripts:ENSMUST00000022450
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11532711Sluc40_msusceptibility to lung cancer 40 (mouse)14127379943Mouse
1301991Wta3_mweight adult 3 (mouse)Not determined14388747337887650Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
4141265Appd2_mAPP associated premature death 2 (mouse)Not determined14594555230114862Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse

Markers in Region
AA793003  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381427,432,558 - 27,432,657UniSTSGRCm38
MGSCv371428,245,744 - 28,245,843UniSTSGRCm37
Celera1423,664,191 - 23,664,290UniSTS
Cytogenetic Map14BUniSTS
Whitehead/MRC_RH14206.85UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS
Ywhaz  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map14BUniSTS
cM Map14 UniSTS
cM Map15 UniSTS
cM Map148.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001114879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006518820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004938380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_383158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_383159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK016751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC064458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD539117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT485787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000022450   ⟹   ENSMUSP00000022450
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1427,150,791 - 27,205,512 (+)Ensembl
GRCm38.p6 Ensembl1427,428,834 - 27,483,555 (+)Ensembl
RefSeq Acc Id: ENSMUST00000223688
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1427,185,830 - 27,188,173 (+)Ensembl
GRCm38.p6 Ensembl1427,463,873 - 27,466,216 (+)Ensembl
RefSeq Acc Id: ENSMUST00000223970
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1427,159,688 - 27,165,770 (+)Ensembl
GRCm38.p6 Ensembl1427,437,731 - 27,443,813 (+)Ensembl
RefSeq Acc Id: ENSMUST00000225139   ⟹   ENSMUSP00000153529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1427,199,127 - 27,205,512 (+)Ensembl
GRCm38.p6 Ensembl1427,477,170 - 27,483,555 (+)Ensembl
RefSeq Acc Id: NM_001114879   ⟹   NP_001108351
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391427,150,791 - 27,205,512 (+)NCBI
GRCm381427,428,834 - 27,483,555 (+)NCBI
MGSCv371428,242,033 - 28,296,741 (+)RGD
Celera1423,660,480 - 23,715,175 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001404930   ⟹   NP_001391859
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391427,150,791 - 27,205,512 (+)NCBI
RefSeq Acc Id: NM_028945   ⟹   NP_083221
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391427,150,791 - 27,205,512 (+)NCBI
GRCm381427,428,834 - 27,483,555 (+)NCBI
MGSCv371428,242,033 - 28,296,741 (+)RGD
Celera1423,660,480 - 23,715,175 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006518820   ⟹   XP_006518883
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391427,150,759 - 27,205,265 (+)NCBI
GRCm381427,423,674 - 27,483,309 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004938380
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391427,150,759 - 27,204,167 (+)NCBI
Sequence:
RefSeq Acc Id: XR_383158
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391427,150,759 - 27,204,219 (+)NCBI
GRCm381427,423,674 - 27,482,262 (+)NCBI
Sequence:
RefSeq Acc Id: XR_383159
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391427,150,759 - 27,204,420 (+)NCBI
GRCm381427,423,674 - 27,481,060 (+)NCBI
Sequence:
RefSeq Acc Id: NP_083221   ⟸   NM_028945
- Peptide Label: isoform 2
- UniProtKB: Q9CUD3 (UniProtKB/Swiss-Prot),   E9PUH2 (UniProtKB/Swiss-Prot),   Q69ZR9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001108351   ⟸   NM_001114879
- Peptide Label: isoform 1
- UniProtKB: Q9CUD3 (UniProtKB/Swiss-Prot),   E9PUH2 (UniProtKB/Swiss-Prot),   Q69ZR9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006518883   ⟸   XM_006518820
- Peptide Label: isoform X1
- UniProtKB: Q9CUD3 (UniProtKB/Swiss-Prot),   Q69ZR9 (UniProtKB/Swiss-Prot),   E9PUH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000153529   ⟸   ENSMUST00000225139
RefSeq Acc Id: ENSMUSP00000022450   ⟸   ENSMUST00000022450
RefSeq Acc Id: NP_001391859   ⟸   NM_001404930
- Peptide Label: isoform 3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q69ZR9-F1-model_v2 AlphaFold Q69ZR9 1-1610 view protein structure

Promoters
RGD ID:8681736
Promoter ID:EPDNEW_M18899
Type:initiation region
Name:Fam208a_1
Description:Mus musculus family with sequence similarity 208, member A ,transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381427,428,867 - 27,428,927EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921694 AgrOrtholog
Ensembl Genes ENSMUSG00000040651 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000022450 ENTREZGENE
  ENSMUST00000022450.6 UniProtKB/Swiss-Prot
  ENSMUST00000225139.2 UniProtKB/TrEMBL
Gene3D-CATH 3.90.228.10 UniProtKB/Swiss-Prot
InterPro DUF3715 UniProtKB/Swiss-Prot
  TASOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:218850 UniProtKB/Swiss-Prot
MGD MGI:1921694 ENTREZGENE
NCBI Gene 218850 ENTREZGENE
PANTHER PROTEIN TASOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR16207 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF3715 UniProtKB/Swiss-Prot
PhenoGen Tasor PhenoGen
UniProt A0A286YDQ5_MOUSE UniProtKB/TrEMBL
  E9PUH2 ENTREZGENE
  Q69ZR9 ENTREZGENE
  Q9CUD3 ENTREZGENE
  TASOR_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary E9PUH2 UniProtKB/Swiss-Prot
  Q9CUD3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-02-26 Tasor  transcription activation suppressor  Fam208a  family with sequence similarity 208, member A  Symbol and/or name change 5135510 APPROVED
2014-05-07 Fam208a  family with sequence similarity 208, member A  D14Abb1e  DNA segment, Chr 14, Abbott 1 expressed  Symbol and/or name change 5135510 APPROVED