Slc35a3 (solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3) - Rat Genome Database

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Gene: Slc35a3 (solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3) Mus musculus
Analyze
Symbol: Slc35a3
Name: solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
RGD ID: 1318492
MGI Page MGI
Description: Enables UDP-galactose transmembrane transporter activity. Involved in UDP-N-acetylglucosamine transmembrane transport. Predicted to be located in Golgi apparatus and membrane. Predicted to be active in Golgi membrane. Is expressed in several structures, including limb; metanephros; tail; testis; and trunk. Orthologous to human SLC35A3 (solute carrier family 35 member A3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310050P13Rik; golgi UDP-GlcNAc transporter; MGC36317; solute carrier family 35 member A3; UDP-N-acetylglucosamine transporter
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393116,463,118 - 116,506,366 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3116,463,119 - 116,506,480 (-)EnsemblGRCm39 Ensembl
GRCm383116,669,469 - 116,712,708 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3116,669,470 - 116,712,831 (-)EnsemblGRCm38mm10GRCm38
MGSCv373116,373,716 - 116,415,198 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363116,662,802 - 116,704,284 (-)NCBIMGSCv36mm8
Celera3123,097,873 - 123,139,255 (-)NCBICelera
Cytogenetic Map3G1NCBI
cM Map350.44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
Golgi apparatus  (IEA,ISO)
Golgi membrane  (IBA,ISO)
membrane  (IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17332066   PMID:18799693   PMID:19521566  
PMID:21267068   PMID:21873635   PMID:30228991   PMID:31118275   PMID:37053259  


Genomics

Comparative Map Data
Slc35a3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393116,463,118 - 116,506,366 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3116,463,119 - 116,506,480 (-)EnsemblGRCm39 Ensembl
GRCm383116,669,469 - 116,712,708 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3116,669,470 - 116,712,831 (-)EnsemblGRCm38mm10GRCm38
MGSCv373116,373,716 - 116,415,198 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363116,662,802 - 116,704,284 (-)NCBIMGSCv36mm8
Celera3123,097,873 - 123,139,255 (-)NCBICelera
Cytogenetic Map3G1NCBI
cM Map350.44NCBI
SLC35A3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38199,969,996 - 100,035,634 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl199,969,351 - 100,035,634 (+)EnsemblGRCh38hg38GRCh38
GRCh371100,435,552 - 100,501,190 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361100,208,128 - 100,261,594 (+)NCBINCBI36Build 36hg18NCBI36
Build 341100,147,560 - 100,201,027NCBI
Celera198,691,115 - 98,744,765 (+)NCBICelera
Cytogenetic Map1p21.2NCBI
HuRef198,557,764 - 98,615,255 (+)NCBIHuRef
CHM1_11100,551,698 - 100,608,854 (+)NCBICHM1_1
T2T-CHM13v2.0199,818,116 - 99,883,750 (+)NCBIT2T-CHM13v2.0
Slc35a3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82207,305,008 - 207,344,225 (-)NCBIGRCr8
mRatBN7.22204,620,103 - 204,659,319 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2204,579,174 - 204,659,319 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2212,278,283 - 212,314,620 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02210,189,105 - 210,225,456 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02205,006,179 - 205,042,534 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02219,705,618 - 219,741,886 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2219,705,620 - 219,741,886 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02237,476,502 - 237,513,171 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42212,902,953 - 212,939,222 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12212,865,708 - 212,901,976 (-)NCBI
Celera2197,114,778 - 197,151,034 (-)NCBICelera
Cytogenetic Map2q42NCBI
Slc35a3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554354,720,633 - 4,774,809 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554354,747,981 - 4,774,250 (+)NCBIChiLan1.0ChiLan1.0
SLC35A3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21126,987,780 - 127,064,633 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11126,157,471 - 126,215,367 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01102,625,605 - 102,701,687 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11101,344,831 - 101,412,372 (+)NCBIpanpan1.1PanPan1.1panPan2
SLC35A3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1649,954,148 - 49,976,260 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl649,950,821 - 49,976,260 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha652,627,204 - 52,678,542 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0650,300,428 - 50,355,335 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl650,300,518 - 50,355,142 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1649,995,603 - 50,047,097 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0649,974,502 - 50,026,207 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0650,406,295 - 50,457,631 (-)NCBIUU_Cfam_GSD_1.0
Slc35a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058110,353,165 - 110,395,580 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936748157,935 - 201,119 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936748158,290 - 200,458 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC35A3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4118,103,006 - 118,153,159 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14118,102,800 - 118,153,144 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24129,697,181 - 129,744,254 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC35A3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12033,302,390 - 33,368,833 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2033,318,200 - 33,368,635 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603824,687,082 - 24,754,627 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc35a3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248572,799,617 - 2,819,965 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248572,781,472 - 2,819,963 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc35a3
1730 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1376
Count of miRNA genes:674
Interacting mature miRNAs:837
Transcripts:ENSMUST00000029569, ENSMUST00000120120, ENSMUST00000131082, ENSMUST00000153108, ENSMUST00000169530
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
11039510Ltpr3d_mLeishmania tropica response 3d (mouse)383463991117464137Mouse
11039511Ltpr3c_mLeishmania tropica response 3c (mouse)383463991117464137Mouse
11039507Ltpr3g_mLeishmania tropica response 3g (mouse)383463991117464137Mouse
11039508Ltpr3f_mLeishmania tropica response 3f (mouse)383463991117464137Mouse
11039509Ltpr3e_mLeishmania tropica response 3e (mouse)383463991117464137Mouse
11039512Ltpr3b_mLeishmania tropica response 3b (mouse)383463991117464137Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
4142099Cq3_mcholesterol QTL 3 (mouse)Not determined384888918118889067Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse
1357583Sle18_msystematic lupus erythematosus susceptibility 18 (mouse)Not determined387208904125316236Mouse
12738440Twq3_mtestis weight QTL 3 (mouse)387228015121228015Mouse
4142178Ctrq2_mC. trachomatis resistance QTL 2 (mouse)Not determined389139967137453008Mouse
10766455Sle22_msystematic lupus erythematosus susceptibility 22 (mouse)390376936124377072Mouse
14747001Mancz4_mmandible centroid size 4 (mouse)390378017124378017Mouse
1302052Etohcta4_methanol conditioned taste aversion 4 (mouse)Not determined391000105125008748Mouse
1301349Pgia26_mproteoglycan induced arthritis 26 (mouse)Not determined392251533126251650Mouse
27226732Tibmd3_mtibia midshaft diameter 3, 10 week (mouse)396607316147805636Mouse
10043955Wt10q4_mbody weight, 10 weeks, QTL 4 (mouse)Not determined398624041132624197Mouse
11533920Mvb3_mmodifier of vibrator 3 (mouse)398635284132635383Mouse
12792984Modn1_mmodifier of Dstn neovascularization 1 (mouse)398635284132635383Mouse
1302114Tbs1_mtuberculosis severity 1 (mouse)Not determined398924105132924250Mouse
1300752Ap6q_malcohol preference 6 QTL (mouse)Not determined3100372912147045722Mouse
26884419Bzwq6_mbi-zygomatic width QTL 6, 10 week (mouse)3100607316137205761Mouse
27226733Tibmd6_mtibia midshaft diameter 6, 16 week (mouse)3101307316149805637Mouse
1301805Mors2_mmodifier of obesity related sterility 2 (mouse)Not determined3103482659137482783Mouse
8655599Cia5c_mcollagen induced arthritis QTL 5c (mouse)Not determined3107376936125316237Mouse
1302093Orgwq5_morgan weight QTL 5 (mouse)Not determined3107376936147304689Mouse
1300619Cdcs1_mcytokine deficiency colitis susceptibility 1 (mouse)Not determined3109834882143835005Mouse
12910793Pwbwq7_mpost-weaning body weight QTL 7 (mouse)3110084357135715812Mouse
12910796Pwbwq6_mpost-weaning body weight QTL 6 (mouse)3110084357135715812Mouse
12910815Ogrq1_moverall growth rate QTL 1 (mouse)3110084357135715812Mouse
1301381Bomb1_mbone marrow pre-B 1 (mouse)Not determined3111133243145133417Mouse
1301100Bdt2_mbone density traits 2 (mouse)Not determined3114736617148736784Mouse

Markers in Region
RH136631  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383116,671,251 - 116,671,454UniSTSGRCm38
MGSCv373116,374,169 - 116,374,372UniSTSGRCm37
Celera3123,098,326 - 123,098,529UniSTS
Cytogenetic Map3G1UniSTS
Slc35a3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3G1UniSTS
cM Map3 UniSTS
Slc35a3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3G1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001362374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001404704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_144902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_175853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_175854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC131038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC147242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HH806468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000029569   ⟹   ENSMUSP00000029569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,463,119 - 116,506,299 (-)Ensembl
GRCm38.p6 Ensembl3116,669,470 - 116,712,650 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120120   ⟹   ENSMUSP00000112674
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,466,802 - 116,505,880 (-)Ensembl
GRCm38.p6 Ensembl3116,673,153 - 116,712,231 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131082
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,484,035 - 116,505,906 (-)Ensembl
GRCm38.p6 Ensembl3116,690,386 - 116,712,257 (-)Ensembl
RefSeq Acc Id: ENSMUST00000153108   ⟹   ENSMUSP00000123641
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,474,754 - 116,505,491 (-)Ensembl
GRCm38.p6 Ensembl3116,681,105 - 116,711,842 (-)Ensembl
RefSeq Acc Id: ENSMUST00000169530   ⟹   ENSMUSP00000127284
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,488,079 - 116,506,480 (-)Ensembl
GRCm38.p6 Ensembl3116,694,430 - 116,712,831 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196331
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,467,318 - 116,470,077 (-)Ensembl
GRCm38.p6 Ensembl3116,673,669 - 116,676,428 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196335   ⟹   ENSMUSP00000142374
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3116,474,889 - 116,505,861 (-)Ensembl
GRCm38.p6 Ensembl3116,681,240 - 116,712,212 (-)Ensembl
RefSeq Acc Id: NM_001362374   ⟹   NP_001349303
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
GRCm383116,669,469 - 116,712,280 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001404697   ⟹   NP_001391626
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,526 (-)NCBI
RefSeq Acc Id: NM_001404698   ⟹   NP_001391627
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,506,366 (-)NCBI
RefSeq Acc Id: NM_001404699   ⟹   NP_001391628
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
RefSeq Acc Id: NM_001404700   ⟹   NP_001391629
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
RefSeq Acc Id: NM_001404701   ⟹   NP_001391630
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
RefSeq Acc Id: NM_001404702   ⟹   NP_001391631
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,506,366 (-)NCBI
RefSeq Acc Id: NM_001404703   ⟹   NP_001391632
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
RefSeq Acc Id: NM_001404704   ⟹   NP_001391633
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
RefSeq Acc Id: NM_144902   ⟹   NP_659151
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
GRCm383116,669,469 - 116,712,280 (-)NCBI
MGSCv373116,373,716 - 116,415,198 (-)RGD
Celera3123,097,873 - 123,139,255 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_175853
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,898 (-)NCBI
RefSeq Acc Id: NR_175854
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,118 - 116,505,526 (-)NCBI
RefSeq Acc Id: XM_036163085   ⟹   XP_036018978
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393116,463,462 - 116,505,405 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_659151   ⟸   NM_144902
- Peptide Label: isoform 1
- UniProtKB: Q8BRW7 (UniProtKB/Swiss-Prot),   Q8R1T4 (UniProtKB/Swiss-Prot),   Q3TTK5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001349303   ⟸   NM_001362374
- Peptide Label: isoform 1
- UniProtKB: Q8R1T4 (UniProtKB/Swiss-Prot),   Q8BRW7 (UniProtKB/Swiss-Prot),   Q3TTK5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000029569   ⟸   ENSMUST00000029569
RefSeq Acc Id: ENSMUSP00000127284   ⟸   ENSMUST00000169530
RefSeq Acc Id: ENSMUSP00000112674   ⟸   ENSMUST00000120120
RefSeq Acc Id: ENSMUSP00000123641   ⟸   ENSMUST00000153108
RefSeq Acc Id: ENSMUSP00000142374   ⟸   ENSMUST00000196335
RefSeq Acc Id: XP_036018978   ⟸   XM_036163085
- Peptide Label: isoform X5
RefSeq Acc Id: NP_001391627   ⟸   NM_001404698
- Peptide Label: isoform 1
- UniProtKB: Q8R1T4 (UniProtKB/Swiss-Prot),   Q8BRW7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001391631   ⟸   NM_001404702
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001391632   ⟸   NM_001404703
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001391630   ⟸   NM_001404701
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001391628   ⟸   NM_001404699
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001391629   ⟸   NM_001404700
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001391633   ⟸   NM_001404704
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001391626   ⟸   NM_001404697
- Peptide Label: isoform 2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8R1T4-F1-model_v2 AlphaFold Q8R1T4 1-326 view protein structure

Promoters
RGD ID:6834505
Promoter ID:MM_KWN:35903
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000120120,   OTTMUST00000073153,   OTTMUST00000073155,   OTTMUST00000073156
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv363116,415,046 - 116,415,546 (-)MPROMDB
RGD ID:6882184
Promoter ID:EPDNEW_M4543
Type:initiation region
Name:Slc35a3_1
Description:Mus musculus solute carrier family 35 (UDP-N-acetylglucosamine(UDP-GlcNAc) transporter), member 3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383116,712,224 - 116,712,284EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1917648 AgrOrtholog
Ensembl Genes ENSMUSG00000027957 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000029569 ENTREZGENE
  ENSMUST00000029569.9 UniProtKB/Swiss-Prot
  ENSMUST00000120120 ENTREZGENE
  ENSMUST00000120120.8 UniProtKB/Swiss-Prot
  ENSMUST00000153108.6 UniProtKB/TrEMBL
  ENSMUST00000169530.2 UniProtKB/TrEMBL
  ENSMUST00000196335.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.3730.20 UniProtKB/TrEMBL
InterPro Nuc_sug_transpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:229782 UniProtKB/Swiss-Prot
MGD MGI:1917648 ENTREZGENE
NCBI Gene 229782 ENTREZGENE
PANTHER PTHR10231 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UDP-N-ACETYLGLUCOSAMINE TRANSPORTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Nuc_sug_transp UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc35a3 PhenoGen
PIRSF UDP-gal_transpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Multidrug resistance efflux transporter EmrE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JDH8_MOUSE UniProtKB/TrEMBL
  D3YXZ7_MOUSE UniProtKB/TrEMBL
  E9Q3V2_MOUSE UniProtKB/TrEMBL
  Q3TTK5 ENTREZGENE, UniProtKB/TrEMBL
  Q3UCA4_MOUSE UniProtKB/TrEMBL
  Q8BRW7 ENTREZGENE
  Q8R1T4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8BRW7 UniProtKB/Swiss-Prot