LOC110598838 (zinc finger protein 525) - Rat Genome Database

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Gene: LOC110598838 (zinc finger protein 525) Ictidomys tridecemlineatus
Analyze
Symbol: LOC110598838
Name: zinc finger protein 525
RGD ID: 13139953
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: zinc finger protein 781; Znf781
RGD Orthologs
Human
Mouse
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530380,611,663 - 80,615,689 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365905,802,878 - 5,805,489 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
LOC110598838
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530380,611,663 - 80,615,689 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365905,802,878 - 5,805,489 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF781
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381937,667,751 - 37,692,315 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1937,667,751 - 37,692,315 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl1937,668,579 - 37,676,393 (-)EnsemblGRCh38hg38GRCh38
GRCh371938,158,652 - 38,183,216 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361942,850,490 - 42,874,992 (-)NCBINCBI36Build 36hg18NCBI36
Celera1934,959,196 - 34,983,751 (-)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1934,608,600 - 34,633,430 (-)NCBIHuRef
CHM1_11938,159,117 - 38,183,683 (-)NCBICHM1_1
T2T-CHM13v2.01940,469,493 - 40,494,068 (-)NCBIT2T-CHM13v2.0
Gm14296
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392176,584,302 - 176,619,606 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2176,584,302 - 176,619,602 (-)EnsemblGRCm39 Ensembl
GRCm382176,892,509 - 176,927,813 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2176,892,509 - 176,927,809 (-)EnsemblGRCm38mm10GRCm38
Celera2181,471,148 - 181,479,717 (+)NCBICelera
Cytogenetic Map2H4NCBI
cM Map299.11NCBI
ZNF781
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366607310,279,245 - 10,292,071 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021731049   ⟹   XP_021586724
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530380,611,664 - 80,615,689 (+)NCBI
SpeTri2.0NW_0049365905,802,878 - 5,805,489 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040294082   ⟹   XP_040150016
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530380,611,663 - 80,615,689 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021586724 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150016 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3274204 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021586724   ⟸   XM_021731049
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_040150016   ⟸   XM_040294082
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene Znf781 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC110598838  zinc finger protein 525  Znf781  zinc finger protein 781  Symbol and/or name change 5135510 APPROVED