Adss2 (adenylosuccinate synthase 2) - Rat Genome Database

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Gene: Adss2 (adenylosuccinate synthase 2) Ictidomys tridecemlineatus
Analyze
Symbol: Adss2
Name: adenylosuccinate synthase 2
RGD ID: 12657857
Description: ENCODES a protein that exhibits adenylosuccinate synthase activity (ortholog); INVOLVED IN AMP biosynthetic process (ortholog); aspartate metabolic process (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 54 (ortholog); gastrointestinal stromal tumor (ortholog); parathyroid carcinoma (ortholog); FOUND IN cytoplasm (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: adenylosuccinate synthase; adenylosuccinate synthase, transcript variant X1; adenylosuccinate synthase, transcript variant X2; adenylosuccinate synthetase isozyme 2; Adss
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934448,366,561 - 48,404,882 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365266,342,221 - 6,380,840 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365266,342,233 - 6,380,736 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
mitochondrion  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Adss2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934448,366,561 - 48,404,882 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365266,342,221 - 6,380,840 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365266,342,233 - 6,380,736 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADSS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381244,408,494 - 244,452,060 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1244,408,494 - 244,451,909 (-)EnsemblGRCh38hg38GRCh38
GRCh371244,571,796 - 244,615,362 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361242,638,419 - 242,682,036 (-)NCBINCBI36Build 36hg18NCBI36
Build 341240,897,836 - 240,941,454NCBI
Celera1217,861,837 - 217,905,438 (-)NCBICelera
Cytogenetic Map1q44ENTREZGENE
HuRef1214,954,992 - 214,998,619 (-)NCBIHuRef
CHM1_11245,844,434 - 245,888,075 (-)NCBICHM1_1
T2T-CHM13v2.01243,824,815 - 243,868,543 (-)NCBIT2T-CHM13v2.0
Adss2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,590,742 - 177,624,064 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1177,590,528 - 177,624,077 (-)EnsemblGRCm39 Ensembl
GRCm381177,763,176 - 177,796,695 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1177,762,962 - 177,796,511 (-)EnsemblGRCm38mm10GRCm38
MGSCv371179,693,309 - 179,726,640 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361179,599,853 - 179,633,184 (-)NCBIMGSCv36mm8
Celera1184,815,169 - 184,848,493 (-)NCBICelera
Cytogenetic Map1H4NCBI
cM Map182.81NCBI
Adss2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81392,301,302 - 92,331,638 (-)NCBIGRCr8
mRatBN7.21389,769,240 - 89,799,577 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1389,769,244 - 89,799,604 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1392,274,500 - 92,304,832 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01393,674,619 - 93,704,952 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01390,853,087 - 90,883,179 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01395,913,426 - 95,943,761 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1395,913,426 - 95,943,761 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013100,355,979 - 100,386,314 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41393,681,036 - 93,711,373 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11393,869,972 - 93,900,303 (-)NCBI
Celera1389,331,572 - 89,361,621 (-)NCBICelera
Cytogenetic Map13q25NCBI
Adss2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554067,683,596 - 7,715,616 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554067,684,979 - 7,715,179 (-)NCBIChiLan1.0ChiLan1.0
ADSS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v214,687,297 - 4,730,341 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan114,909,338 - 4,952,688 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01220,020,480 - 220,063,658 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11225,401,544 - 225,444,984 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1225,401,544 - 225,444,984 (-)Ensemblpanpan1.1panPan2
ADSS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1735,440,250 - 35,477,470 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl735,440,676 - 35,476,795 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha734,914,701 - 34,951,923 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0735,267,843 - 35,305,065 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl735,267,844 - 35,304,386 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1735,103,992 - 35,141,205 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0735,120,419 - 35,155,914 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0735,385,151 - 35,422,371 (-)NCBIUU_Cfam_GSD_1.0
ADSS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1017,220,207 - 17,259,182 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11017,220,081 - 17,259,141 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21019,583,927 - 19,606,684 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADSS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12581,441,792 - 81,485,344 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2581,442,787 - 81,485,292 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605583,656,557 - 83,700,262 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adss2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477115,059,876 - 15,097,518 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477115,059,845 - 15,097,518 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000004381   ⟹   ENSSTOP00000003930
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365266,342,221 - 6,380,840 (+)Ensembl
RefSeq Acc Id: XM_005326565   ⟹   XP_005326622
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934448,366,561 - 48,404,882 (-)NCBI
SpeTri2.0NW_0049365266,342,233 - 6,380,736 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005326622 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000003930.3
GenBank Protein KAG3257953 (Get FASTA)   NCBI Sequence Viewer  
  KAG3257954 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005326622   ⟸   XM_005326565
- UniProtKB: I3M446 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000003930   ⟸   ENSSTOT00000004381


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000004376 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000004381.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.300.10 UniProtKB/TrEMBL
  3.40.440.10 UniProtKB/TrEMBL
  3.90.170.10 UniProtKB/TrEMBL
InterPro Adenylosuccin_syn_GTP-bd UniProtKB/TrEMBL
  Adenylosuccin_syn_Lys_AS UniProtKB/TrEMBL
  Adenylosuccinate_synth_dom1 UniProtKB/TrEMBL
  Adenylosuccinate_synth_dom2 UniProtKB/TrEMBL
  Adenylosuccinate_synth_dom3 UniProtKB/TrEMBL
  Adenylosuccinate_synthetase UniProtKB/TrEMBL
  AdSS_2_vert UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene Adss ENTREZGENE
PANTHER ADENYLOSUCCINATE SYNTHETASE ISOZYME 2 UniProtKB/TrEMBL
  PTHR11846 UniProtKB/TrEMBL
Pfam Adenylsucc_synt UniProtKB/TrEMBL
PROSITE ADENYLOSUCCIN_SYN_1 UniProtKB/TrEMBL
  ADENYLOSUCCIN_SYN_2 UniProtKB/TrEMBL
SMART Adenylsucc_synt UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt I3M446 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-07-16 Adss2  adenylosuccinate synthase 2  Adss  adenylosuccinate synthase  Symbol and/or name change 5135510 APPROVED