Gene: Lipj (lipase family member J) Ictidomys tridecemlineatus |
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Analyze |
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Symbol: |
Lipj |
Name: |
lipase family member J |
RGD ID: |
12628019 |
Description: |
ASSOCIATED WITH end stage renal disease (ortholog); PTEN hamartoma tumor syndrome (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
lipase member J; lipase, family member J; LOC101961491 |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
Position: |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
Lipj (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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LIPJ (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 10 | 88,582,907 - 88,623,184 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 88,586,753 - 88,606,976 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 90,342,664 - 90,366,733 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 90,336,499 - 90,356,712 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 10 | 84,093,334 - 84,113,548 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q23.31 | NCBI | | | | | HuRef | 10 | 83,981,090 - 84,001,299 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 90,628,595 - 90,648,809 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 89,466,981 - 89,507,284 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Lipj (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 240,776,650 - 240,789,997 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 231,363,526 - 231,376,784 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 231,363,646 - 231,376,784 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 1 | 252,154,610 - 252,167,791 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 252,154,616 - 252,167,752 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 259,377,521 - 259,390,575 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 237,694,841 - 237,708,819 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 1 | 228,477,188 - 228,490,290 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q52 | NCBI | | | | |
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Lipj (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955425 | 4,337,718 - 4,365,841 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955425 | 4,337,718 - 4,368,577 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LIPJ (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 8 | 100,596,654 - 100,624,400 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 100,601,969 - 100,629,715 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 85,307,536 - 85,330,911 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 88,816,492 - 88,832,860 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 88,816,492 - 88,832,860 (+) | Ensembl | panpan1.1 | | panPan2 | |
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LIPJ (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 26 | 38,419,821 - 38,441,234 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 26 | 38,424,721 - 38,588,175 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 26 | 38,232,759 - 38,258,116 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 26 | 40,004,034 - 40,025,430 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 26 | 37,840,192 - 37,865,672 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 26 | 37,435,626 - 37,460,870 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 26 | 38,705,616 - 38,730,906 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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LIPJ (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 9 | 82,032,074 - 82,052,232 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 82,035,967 - 82,052,166 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 42,709,571 - 42,729,649 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Expression
Sequence
RefSeq Acc Id: |
XM_040273304 ⟹ XP_040129238 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
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HiC_Itri_2 | NW_024407213 | 78,139,052 - 78,159,785 (+) | NCBI |
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RefSeq Acc Id: |
XP_040129238 ⟸ XM_040273304 |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2021-03-26 |
Lipj |
lipase family member J |
LOC101961491 |
lipase member J |
Symbol and/or name change |
5135510 |
APPROVED |
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