Mapk8ip1 (mitogen-activated protein kinase 8 interacting protein 1) - Rat Genome Database

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Gene: Mapk8ip1 (mitogen-activated protein kinase 8 interacting protein 1) Ictidomys tridecemlineatus
Analyze
Symbol: Mapk8ip1
Name: mitogen-activated protein kinase 8 interacting protein 1
RGD ID: 12437361
Description: ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); MAP-kinase scaffold activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); negative regulation of JNK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIc (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN axonal growth cone (ortholog); dendritic growth cone (ortholog); perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C-Jun-amino-terminal kinase-interacting protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494721,001,575 - 21,011,189 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365623,109,547 - 3,122,939 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365623,113,217 - 3,122,794 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mapk8ip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494721,001,575 - 21,011,189 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365623,109,547 - 3,122,939 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365623,113,217 - 3,122,794 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAPK8IP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381145,885,651 - 45,906,465 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1145,885,651 - 45,906,465 (+)EnsemblGRCh38hg38GRCh38
GRCh371145,907,202 - 45,928,016 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361145,863,778 - 45,884,592 (+)NCBINCBI36Build 36hg18NCBI36
Build 341145,863,777 - 45,884,591NCBI
Celera1146,054,811 - 46,075,621 (+)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1145,613,904 - 45,634,868 (+)NCBIHuRef
CHM1_11145,904,472 - 45,925,436 (+)NCBICHM1_1
T2T-CHM13v2.01146,041,587 - 46,062,395 (+)NCBIT2T-CHM13v2.0
Mapk8ip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39292,214,021 - 92,231,608 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl292,214,021 - 92,231,608 (-)EnsemblGRCm39 Ensembl
GRCm38292,383,671 - 92,401,346 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl292,383,676 - 92,401,263 (-)EnsemblGRCm38mm10GRCm38
MGSCv37292,223,837 - 92,241,420 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36292,184,519 - 92,202,102 (-)NCBIMGSCv36mm8
Celera293,776,808 - 93,794,307 (-)NCBICelera
Cytogenetic Map2E1NCBI
cM Map250.99NCBI
Mapk8ip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8398,810,540 - 98,829,302 (-)NCBIGRCr8
mRatBN7.2378,355,051 - 78,372,946 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl378,355,048 - 78,372,884 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx381,830,830 - 81,839,989 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0390,429,871 - 90,439,030 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0388,280,966 - 88,290,137 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0381,295,023 - 81,304,181 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl381,295,024 - 81,304,181 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0387,998,491 - 88,016,191 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4376,781,504 - 76,790,661 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1376,677,932 - 76,687,089 (-)NCBI
Celera377,557,046 - 77,566,196 (-)NCBICelera
Cytogenetic Map3q24NCBI
Mapk8ip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554222,061,851 - 2,082,514 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554222,064,010 - 2,081,681 (-)NCBIChiLan1.0ChiLan1.0
MAPK8IP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2948,094,027 - 48,114,916 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11148,100,901 - 48,121,788 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01145,839,754 - 45,860,615 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11146,332,121 - 46,352,750 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1146,332,159 - 46,352,010 (+)Ensemblpanpan1.1panPan2
MAPK8IP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11843,517,186 - 43,522,603 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1843,517,677 - 43,526,379 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1842,245,214 - 42,263,683 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01844,173,152 - 44,191,616 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1844,173,163 - 44,192,012 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11843,657,404 - 43,675,863 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01843,210,353 - 43,228,830 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01843,942,641 - 43,961,111 (-)NCBIUU_Cfam_GSD_1.0
MAPK8IP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl216,564,257 - 16,584,768 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1216,562,687 - 16,584,763 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2217,929,057 - 17,949,520 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAPK8IP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1119,435,593 - 19,457,073 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl119,432,631 - 19,442,185 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038116,712,446 - 116,733,704 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mapk8ip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247672,603,483 - 2,620,536 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247672,603,483 - 2,620,574 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000026413   ⟹   ENSSTOP00000017573
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365623,109,547 - 3,122,939 (-)Ensembl
RefSeq Acc Id: XM_005330028   ⟹   XP_005330085
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494721,001,575 - 21,011,189 (-)NCBI
SpeTri2.0NW_0049365623,113,217 - 3,122,794 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040284455   ⟹   XP_040140389
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494721,001,575 - 21,007,948 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005330085 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140389 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000017573.2
GenBank Protein KAG3285404 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005330085   ⟸   XM_005330028
- Peptide Label: isoform X1
- UniProtKB: I3MZM7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040140389   ⟸   XM_040284455
- Peptide Label: isoform X2
RefSeq Acc Id: ENSSTOP00000017573   ⟸   ENSSTOT00000026413
Protein Domains
PID   SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000027362 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000026413.2 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro JIP1_scaffold UniProtKB/TrEMBL
  JIP1_SH3 UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PTB/PI_dom UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
NCBI Gene Mapk8ip1 ENTREZGENE
PANTHER C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN 1 UniProtKB/TrEMBL
  JNK-INTERACTING PROTEIN 1-LIKE PROTEIN UniProtKB/TrEMBL
Pfam PID UniProtKB/TrEMBL
  SH3_9 UniProtKB/TrEMBL
PROSITE PID UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
SMART PTB UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF50044 UniProtKB/TrEMBL
UniProt I3MZM7 ENTREZGENE, UniProtKB/TrEMBL