TRIT1 (tRNA isopentenyltransferase 1)

Gene: TRIT1 (tRNA isopentenyltransferase 1) Canis lupus familiaris

Analyze

Symbol:

TRIT1

Name:

tRNA isopentenyltransferase 1

RGD ID:

12301290

Description:

ENCODES a protein that exhibits AMP dimethylallyltransferase activity (inferred); ATP binding (inferred); metal ion binding (inferred); INVOLVED IN mitochondrial tRNA modification (inferred); tRNA modification (inferred); tRNA processing (inferred); ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); combined oxidative phosphorylation deficiency 35 (ortholog); Generalized Epilepsy (ortholog); FOUND IN mitochondrion (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tRNA dimethylallyltransferase; tRNA dimethylallyltransferase, mitochondrial

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	3,013,928 - 3,071,029 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	3,013,666 - 3,071,034 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	3,270,430 - 3,328,161 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	3,100,834 - 3,158,792 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	3,101,249 - 3,158,788 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	3,007,689 - 3,065,419 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	3,067,609 - 3,128,094 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	3,084,025 - 3,141,812 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease dominant intermediate C (ISO)

combined oxidative phosphorylation deficiency 35 (ISO)

Generalized Epilepsy (ISO)

genetic disease (ISO)

Macrocephaly (ISO)

pre-malignant neoplasm (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitochondrial tRNA modification (IEA)

tRNA modification (IEA)

tRNA processing (IEA)

Cellular Component

cytoplasm (IEA)

mitochondrion (IEA,ISO)

Molecular Function

AMP dimethylallyltransferase activity (IEA)

ATP binding (IEA)

metal ion binding (IEA)

nucleic acid binding (IEA)

protein binding (ISO)

transferase activity (IEA)

transferase activity, transferring alkyl or aryl (other than methyl) groups (IEA)

tRNA dimethylallyltransferase activity (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

TRIT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	3,013,928 - 3,071,029 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	3,013,666 - 3,071,034 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	3,270,430 - 3,328,161 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	3,100,834 - 3,158,792 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	3,101,249 - 3,158,788 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	3,007,689 - 3,065,419 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	3,067,609 - 3,128,094 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	3,084,025 - 3,141,812 (+)	NCBI		UU_Cfam_GSD_1.0

TRIT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	39,838,110 - 39,883,511 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	39,838,110 - 39,883,511 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	40,303,782 - 40,349,183 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	40,079,315 - 40,121,764 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	39,975,821 - 40,018,270	NCBI
Celera	1	38,588,146 - 38,630,620 (-)	NCBI		Celera
Cytogenetic Map	1	p34.2	NCBI
HuRef	1	38,425,294 - 38,467,814 (-)	NCBI		HuRef
CHM1_1	1	40,422,408 - 40,464,830 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	39,707,546 - 39,752,951 (-)	NCBI		T2T-CHM13v2.0

Trit1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	122,910,342 - 122,948,742 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	122,910,390 - 122,948,742 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	123,016,544 - 123,054,949 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	123,016,597 - 123,054,949 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	122,693,840 - 122,732,177 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	122,518,900 - 122,557,237 (+)	NCBI		MGSCv36	mm8
Celera	4	121,346,514 - 121,384,922 (+)	NCBI		Celera
Cytogenetic Map	4	D2.2	NCBI
cM Map	4	57.36	NCBI

Trit1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	140,578,459 - 140,623,881 (+)	NCBI		GRCr8
mRatBN7.2	5	135,293,472 - 135,341,522 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	135,295,330 - 135,338,764 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	138,002,003 - 138,045,445 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	139,771,983 - 139,815,418 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	139,779,104 - 139,822,539 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	140,711,943 - 140,756,893 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	140,712,583 - 140,756,085 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	144,502,459 - 144,547,373 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	142,330,963 - 142,374,390 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	142,336,188 - 142,379,610 (+)	NCBI
Celera	5	133,833,435 - 133,876,861 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Trit1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	17,330,446 - 17,378,579 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	17,330,446 - 17,378,579 (-)	NCBI	ChiLan1.0	ChiLan1.0

TRIT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	186,938,853 - 186,982,063 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	186,076,509 - 186,119,695 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	39,130,198 - 39,173,238 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	40,456,427 - 40,499,187 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	40,456,432 - 40,499,187 (-)	Ensembl	panpan1.1		panPan2

Trit1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	55,864,634 - 55,914,998 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	21,689,363 - 21,739,857 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	21,689,411 - 21,739,770 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	95,626,825 - 95,683,805 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	95,622,056 - 95,683,817 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	88,777,755 - 88,797,787 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRIT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	93,017,385 - 93,065,601 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	93,017,428 - 93,064,904 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	23,775,915 - 23,824,797 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trit1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624764	22,323,732 - 22,370,298 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TRIT1
344 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	3		15		4		6		12		10
Low	2	5	7	6	2	6		6		8		6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014119330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022427766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038451716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038557776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038557777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038557778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038557779	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038621650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038621651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038621652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_532548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001317736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005336294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005370107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005404343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005437839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000004911 ⟹ ENSCAFP00000004550

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	3,024,023 - 3,071,034 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000073395 ⟹ ENSCAFP00000049177

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	3,013,666 - 3,071,034 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845020021 ⟹ ENSCAFP00845015686

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	3,101,249 - 3,158,780 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845020124 ⟹ ENSCAFP00845015774

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	3,111,597 - 3,158,788 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845020175 ⟹ ENSCAFP00845015813

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	3,111,597 - 3,158,780 (+)	Ensembl

RefSeq Acc Id:

XM_014119330 ⟹ XP_013974805

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	3,013,928 - 3,071,029 (+)	NCBI
Dog10K_Boxer_Tasha	15	3,270,430 - 3,328,161 (+)	NCBI

Sequence:

show sequence

CTGAGGTTGCTTCCTCGCCTCGGAGAACCCCAGCGGAAGTTTGGAAAAAACCTCTCTACCTTCT
GGAGTATGGTTTTCGGGAGCCAACTGACTTCTGGAACTGTCTTTGGAGAACAGGTTTATGAAGG
CCTGGACATCATCACGAACAAGGTTACTGCCCAAGAGCAGAGAATGTGCCAGCACCACATGATC
AGCTTTGTGGATCCTCTCGTGACAAATTACACAGTTGTGGACTTCAGGAACAAAGCAACAGCTC
TAATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTCGTGGGAGGAACCAATTACTACAT
TGAGTCTCTGCTCTGGAAAGTTCTTGTCAATACTAAGCCCCAGGAGATGGGCACTGAGAAAGTG
ATTGACCGGAAGGTAGAGCTTGAAAAGGAGGATGGCCATGCACTCCACAAACGCCTAAGCCAAG
TGGACCCAGAAATGGCTGCCAAGCTGCACCCGCATGACAAGCGCAAAGTAGCCAGGAGCTTGCA
GGTGTTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTTCATCGTCAACATGCGGAGGAAGGT
GGTGGTCCTCTCGGAGGCCCTCTGAAGTTCCCTAATCTTTGCATCCTCTGGCTTCATGCTGACC
AGACAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTAGCTGCTGGGCTCTTGGA
TGAACTAAGAGATTTTCACCGACGCTATAATCAGAAGAAAGTTGCAGAAAACAGCCAGGACTAT
CAACATGGTATCTTCCAATCCATTGGCTTCAAGGAATTTCATGAGTACCTGGTCACTGAGGGAA
AATGCACACCAGAGACTAGTAACCAGCTCCTAAAGAAAGGTATCGAGTCTTTGAAACAAGTGAC
TAAGAGATATGCCCGGAAGCAAAACCGATGGGTTAAAAATCGGTTTTTGAGCAGACCTGGTCCC
AGAGTCCCCCCAGTATATGGCTTAGAAGTGTCTGATGTCTCGAAGTGGGAAGAGTGTGTTCTTG
AACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACCAGCCTGCAGCTGCTCCAGTAAA
GATGCCATGCAATGAAACAGAGAACAGGAGAAGTCATCACATGTGTGACCTCTGTGATCGAATC
ATCATTGGGGACCGTGAATGGGCAGCACACATAAAATCCAAATCCCACTTGCACCGACTAAAGA
AGAGAAGAAGATTGGACTCGGATGCTGTCACTACCATAGAAAGTCCGAGTATTTCTTCAGACCA
TGAGAAAGAGCTTAAAGAGAAAGGATCCCTAGGGCAGAATGAGAAAGAGCTGGAATCTAGTGTT
TAAAGAGACATGTCCAGTAGCCTTTGCACAGATACTTTTATAGATGACTGAAGTATTATGGGCC
ACAAATCGGGAGTTCTGGATTTGGGTGAATGGCAGGAAAGGACCAGCCCCAGCGAGAAGATTAA
GTGAACTCAACCACCAGTTCTTGGAATTCCACTGAGAAGGAGAGAAGAACGTGGTCATGACATG
GCACTTGAAAACTAAAGACTTTGACATTTTGTTGAGTTCTTCCTGTGTGATAATTACTCTCACT
GCTGTCTTTACATTAAGTTAGGAGCCTATATTTTTATTGAAAGTTAAATTAAAAAAAAAGAAAG
TTTC

hide sequence

RefSeq Acc Id:

XM_022427766 ⟹ XP_022283474

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	3,024,085 - 3,071,029 (+)	NCBI
Dog10K_Boxer_Tasha	15	3,281,230 - 3,328,161 (+)	NCBI

Sequence:

show sequence

GACGCTGCCTCTCGTAGTGATTCTCGGGGCCACCGGCACCGGCAAATCCACCCTGGCGTTGCAG
CTAGGCCAGCGGCTCGGCGGCGAAATCGTCAGCGCCGACTCCATGCAGAACCATGAGGGGGTTC
ACTGAATGGAAGCAGTCTTCTCCTCGGTTTCTGGAATTTAATTTCACCTTAATAAGAGTTTATT
ACTTCAAGCAAGCAAACAGATCAGAGTCAAATGGGGATAAAAATTCTACTGGTTTATGAAGGCC
TGGACATCATCACGAACAAGGTTACTGCCCAAGAGCAGAGAATGTGCCAGCACCACATGATCAG
CTTTGTGGATCCTCTCGTGACAAATTACACAGTTGTGGACTTCAGGAACAAAGCAACAGCTCTA
ATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTCGTGGGAGGAACCAATTACTACATTG
AGTCTCTGCTCTGGAAAGTTCTTGTCAATACTAAGCCCCAGGAGATGGGCACTGAGAAAGTGAT
TGACCGGAAGGTAGAGCTTGAAAAGGAGGATGGCCATGCACTCCACAAACGCCTAAGCCAAGTG
GACCCAGAAATGGCTGCCAAGCTGCACCCGCATGACAAGCGCAAAGTAGCCAGGAGCTTGCAGG
TGTTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTTCATCGTCAACATGCGGAGGAAGGTGG
TGGTCCTCTCGGAGGCCCTCTGAAGTTCCCTAATCTTTGCATCCTCTGGCTTCATGCTGACCAG
ACAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCTAGCTGCTGGGCTCTTGGATG
AACTAAGAGATTTTCACCGACGCTATAATCAGAAGAAAGTTGCAGAAAACAGCCAGGACTATCA
ACATGGTATCTTCCAATCCATTGGCTTCAAGGAATTTCATGAGTACCTGGTCACTGAGGGAAAA
TGCACACCAGAGACTAGTAACCAGCTCCTAAAGAAAGGTATCGAGTCTTTGAAACAAGTGACTA
AGAGATATGCCCGGAAGCAAAACCGATGGGTTAAAAATCGGTTTTTGAGCAGACCTGGTCCCAG
AGTCCCCCCAGTATATGGCTTAGAAGTGTCTGATGTCTCGAAGTGGGAAGAGTGTGTTCTTGAA
CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACCAGCCTGCAGCTGCTCCAGTAAAGA
TGCCATGCAATGAAACAGAGAACAGGAGAAGTCATCACATGTGTGACCTCTGTGATCGAATCAT
CATTGGGGACCGTGAATGGGCAGCACACATAAAATCCAAATCCCACTTGCACCGACTAAAGAAG
AGAAGAAGATTGGACTCGGATGCTGTCACTACCATAGAAAGTCCGAGTATTTCTTCAGACCATG
AGAAAGAGCTTAAAGAGAAAGGATCCCTAGGGCAGAATGAGAAAGAGCTGGAATCTAGTGTTTA
AAGAGACATGTCCAGTAGCCTTTGCACAGATACTTTTATAGATGACTGAAGTATTATGGGCCAC
AAATCGGGAGTTCTGGATTTGGGTGAATGGCAGGAAAGGACCAGCCCCAGCGAGAAGATTAAGT
GAACTCAACCACCAGTTCTTGGAATTCCACTGAGAAGGAGAGAAGAACGTGGTCATGACATGGC
ACTTGAAAACTAAAGACTTTGACATTTTGTTGAGTTCTTCCTGTGTGATAATTACTCTCACTGC
TGTCTTTACATTAAGTTAGGAGCCTATATTTTTATTGAAAGTTAAATTAAAAAAAAAGAAAGTT
TC

hide sequence

RefSeq Acc Id:

XM_038451716 ⟹ XP_038307644

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	15	3,291,505 - 3,328,161 (+)	NCBI

RefSeq Acc Id:

XM_038495418 ⟹ XP_038351346

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	3,018,436 - 3,065,419 (+)	NCBI

RefSeq Acc Id:

XM_038495419 ⟹ XP_038351347

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	3,018,519 - 3,065,419 (+)	NCBI

RefSeq Acc Id:

XM_038495420 ⟹ XP_038351348

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	3,028,692 - 3,065,419 (+)	NCBI

RefSeq Acc Id:

XM_038495421 ⟹ XP_038351349

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	3,007,689 - 3,065,419 (+)	NCBI

RefSeq Acc Id:

XM_038557776 ⟹ XP_038413704

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	3,094,773 - 3,141,812 (+)	NCBI

RefSeq Acc Id:

XM_038557777 ⟹ XP_038413705

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	3,094,856 - 3,141,812 (+)	NCBI

RefSeq Acc Id:

XM_038557778 ⟹ XP_038413706

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	3,105,043 - 3,141,812 (+)	NCBI

RefSeq Acc Id:

XM_038557779 ⟹ XP_038413707

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	3,084,025 - 3,141,812 (+)	NCBI

RefSeq Acc Id:

XM_038621650 ⟹ XP_038477578

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	3,078,347 - 3,128,094 (+)	NCBI

RefSeq Acc Id:

XM_038621651 ⟹ XP_038477579

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	3,078,444 - 3,128,094 (+)	NCBI

RefSeq Acc Id:

XM_038621652 ⟹ XP_038477580

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	3,067,609 - 3,128,094 (+)	NCBI

RefSeq Acc Id:

XM_038687432 ⟹ XP_038543360

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	3,111,584 - 3,158,792 (+)	NCBI

RefSeq Acc Id:

XM_038687433 ⟹ XP_038543361

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	3,111,667 - 3,158,792 (+)	NCBI

RefSeq Acc Id:

XM_038687434 ⟹ XP_038543362

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	3,121,909 - 3,158,792 (+)	NCBI

RefSeq Acc Id:

XM_038687435 ⟹ XP_038543363

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	3,100,834 - 3,158,792 (+)	NCBI

RefSeq Acc Id:

XM_532548 ⟹ XP_532548

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	3,023,998 - 3,071,029 (+)	NCBI
Dog10K_Boxer_Tasha	15	3,281,147 - 3,328,161 (+)	NCBI

Sequence:

show sequence

CCGCGCAAGCGCAGATGTCTTCAAGATGGCGGCGGCGGCGGCTGCACGAGCGGTTTCTGTGGGC
TCTGGGCTCCGGGGCTTGCCGCGGACGCTGCCTCTCGTAGTGATTCTCGGGGCCACCGGCACCG
GCAAATCCACCCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGCGAAATCGTCAGCGCCGACTC
CATGCAGGTTTATGAAGGCCTGGACATCATCACGAACAAGGTTACTGCCCAAGAGCAGAGAATG
TGCCAGCACCACATGATCAGCTTTGTGGATCCTCTCGTGACAAATTACACAGTTGTGGACTTCA
GGAACAAAGCAACAGCTCTAATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTCGTGGG
AGGAACCAATTACTACATTGAGTCTCTGCTCTGGAAAGTTCTTGTCAATACTAAGCCCCAGGAG
ATGGGCACTGAGAAAGTGATTGACCGGAAGGTAGAGCTTGAAAAGGAGGATGGCCATGCACTCC
ACAAACGCCTAAGCCAAGTGGACCCAGAAATGGCTGCCAAGCTGCACCCGCATGACAAGCGCAA
AGTAGCCAGGAGCTTGCAGGTGTTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTTCATCGT
CAACATGCGGAGGAAGGTGGTGGTCCTCTCGGAGGCCCTCTGAAGTTCCCTAATCTTTGCATCC
TCTGGCTTCATGCTGACCAGACAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGCT
AGCTGCTGGGCTCTTGGATGAACTAAGAGATTTTCACCGACGCTATAATCAGAAGAAAGTTGCA
GAAAACAGCCAGGACTATCAACATGGTATCTTCCAATCCATTGGCTTCAAGGAATTTCATGAGT
ACCTGGTCACTGAGGGAAAATGCACACCAGAGACTAGTAACCAGCTCCTAAAGAAAGGTATCGA
GTCTTTGAAACAAGTGACTAAGAGATATGCCCGGAAGCAAAACCGATGGGTTAAAAATCGGTTT
TTGAGCAGACCTGGTCCCAGAGTCCCCCCAGTATATGGCTTAGAAGTGTCTGATGTCTCGAAGT
GGGAAGAGTGTGTTCTTGAACCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACCAGCC
TGCAGCTGCTCCAGTAAAGATGCCATGCAATGAAACAGAGAACAGGAGAAGTCATCACATGTGT
GACCTCTGTGATCGAATCATCATTGGGGACCGTGAATGGGCAGCACACATAAAATCCAAATCCC
ACTTGCACCGACTAAAGAAGAGAAGAAGATTGGACTCGGATGCTGTCACTACCATAGAAAGTCC
GAGTATTTCTTCAGACCATGAGAAAGAGCTTAAAGAGAAAGGATCCCTAGGGCAGAATGAGAAA
GAGCTGGAATCTAGTGTTTAAAGAGACATGTCCAGTAGCCTTTGCACAGATACTTTTATAGATG
ACTGAAGTATTATGGGCCACAAATCGGGAGTTCTGGATTTGGGTGAATGGCAGGAAAGGACCAG
CCCCAGCGAGAAGATTAAGTGAACTCAACCACCAGTTCTTGGAATTCCACTGAGAAGGAGAGAA
GAACGTGGTCATGACATGGCACTTGAAAACTAAAGACTTTGACATTTTGTTGAGTTCTTCCTGT
GTGATAATTACTCTCACTGCTGTCTTTACATTAAGTTAGGAGCCTATATTTTTATTGAAAGTTA
AATTAAAAAAAAAGAAAGTTTC

hide sequence

RefSeq Acc Id:

XR_001317736

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	3,023,997 - 3,071,029 (+)	NCBI
Dog10K_Boxer_Tasha	15	3,281,147 - 3,328,161 (+)	NCBI

Sequence:

show sequence

TCCGCGCAAGCGCAGATGTCTTCAAGATGGCGGCGGCGGCGGCTGCACGAGCGGTTTCTGTGGG
CTCTGGGCTCCGGGGCTTGCCGCGGACGCTGCCTCTCGTAGTGATTCTCGGGGCCACCGGCACC
GGCAAATCCACCCTGGCGTTGCAGCTAGGCCAGCGGCTCGGCGGCGAAATCGTCAGCGCCGACT
CCATGCAGGTTTATGAAGGCCTGGACATCATCACGAACAAGGTTACTGCCCAAGAGCAGAGAAT
GTGCCAGCACCACATGATCAGCTTTGTGGATCCTCTCGTGACAAATTACACAGTTGTGGACTTC
AGGAACAAAGCAACAGCTCTAATTGAAGATATATTTGCCCGAGACAAAATTCCTATTGTCGTGG
GAGGAACCAATTACTACATTGAGTCTCTGCTCTGGAAAGTTCTTGTCAATACTAAGCCCCAGGA
GATGGGCACTGAGAAAGTGATTGACCGGAAGGTAGAGCTTGAAAAGGAGGATGGCCATGCACTC
CACAAACGCCTAAGCCAAGTGGACCCAGAAATGGCTGCCAAGCTGCACCCGCATGACAAGCGCA
AAGTAGCCAGGAGCTTGCAGGTGTTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTTCATCG
TCAACATGCGGAGGAAGGTGGTGGTCCTCTCGGAGGCCCTCTGAAGTTCCCTAATCTTTGCATC
CTCTGGCTTCATGCTGACCAGACAGTTCTAGATGAGCGCTTGGATAAGAGGGTGGATGACATGC
TAGCTGCTGGGCTCTTGGATGAACTAAGAGATTTTCACCGACGCTATAATCAGAAGAAAGTTGC
AGAAAACAGCCAGGACTATCAACATGGTATCTTCCAATCCATTGGCTTCAAGGAATTTCATGAG
TACCTGGTCACTGAGGGAAAATGCACACCAGAGACTAGTAACCAGCTCCTAAAGAAAGGTATCG
AGTCTTTGAAACAAGTGACTAAGAGATATGCCCGGAAGCAAAACCGATGGGTTAAAAATCGGTT
TTTGAGCAGGCCACCAGCCTGCAGCTGCTCCAGTAAAGATGCCATGCAATGAAACAGAGAACAG
GAGAAGTCATCACATGTGTGACCTCTGTGATCGAATCATCATTGGGGACCGTGAATGGGCAGCA
CACATAAAATCCAAATCCCACTTGCACCGACTAAAGAAGAGAAGAAGATTGGACTCGGATGCTG
TCACTACCATAGAAAGTCCGAGTATTTCTTCAGACCATGAGAAAGAGCTTAAAGAGAAAGGATC
CCTAGGGCAGAATGAGAAAGAGCTGGAATCTAGTGTTTAAAGAGACATGTCCAGTAGCCTTTGC
ACAGATACTTTTATAGATGACTGAAGTATTATGGGCCACAAATCGGGAGTTCTGGATTTGGGTG
AATGGCAGGAAAGGACCAGCCCCAGCGAGAAGATTAAGTGAACTCAACCACCAGTTCTTGGAAT
TCCACTGAGAAGGAGAGAAGAACGTGGTCATGACATGGCACTTGAAAACTAAAGACTTTGACAT
TTTGTTGAGTTCTTCCTGTGTGATAATTACTCTCACTGCTGTCTTTACATTAAGTTAGGAGCCT
ATATTTTTATTGAAAGTTAAATTAAAAAAAAAGAAAGTTTC

hide sequence

RefSeq Acc Id:

XR_005336294

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	3,018,436 - 3,065,419 (+)	NCBI

RefSeq Acc Id:

XR_005370107

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	3,094,773 - 3,141,812 (+)	NCBI

RefSeq Acc Id:

XR_005404343

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	3,078,347 - 3,128,094 (+)	NCBI

RefSeq Acc Id:

XR_005437839

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	3,111,584 - 3,158,792 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013974805	(Get FASTA)	NCBI Sequence Viewer
	XP_022283474	(Get FASTA)	NCBI Sequence Viewer
	XP_038307644	(Get FASTA)	NCBI Sequence Viewer
	XP_038351346	(Get FASTA)	NCBI Sequence Viewer
	XP_038351347	(Get FASTA)	NCBI Sequence Viewer
	XP_038351348	(Get FASTA)	NCBI Sequence Viewer
	XP_038351349	(Get FASTA)	NCBI Sequence Viewer
	XP_038413704	(Get FASTA)	NCBI Sequence Viewer
	XP_038413705	(Get FASTA)	NCBI Sequence Viewer
	XP_038413706	(Get FASTA)	NCBI Sequence Viewer
	XP_038413707	(Get FASTA)	NCBI Sequence Viewer
	XP_038477578	(Get FASTA)	NCBI Sequence Viewer
	XP_038477579	(Get FASTA)	NCBI Sequence Viewer
	XP_038477580	(Get FASTA)	NCBI Sequence Viewer
	XP_038543360	(Get FASTA)	NCBI Sequence Viewer
	XP_038543361	(Get FASTA)	NCBI Sequence Viewer
	XP_038543362	(Get FASTA)	NCBI Sequence Viewer
	XP_038543363	(Get FASTA)	NCBI Sequence Viewer
	XP_532548	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000004550.4
	ENSCAFP00030032998.1
	ENSCAFP00040023306.1
	ENSCAFP00040023341.1
	ENSCAFP00040023385.1
	ENSCAFP00040023466.1
	ENSCAFP00845015686
	ENSCAFP00845015686.1
	ENSCAFP00845015774.1
	ENSCAFP00845015813
	ENSCAFP00845015813.1

RefSeq Acc Id:	XP_013974805 ⟸ XM_014119330
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVFGSQLTSGTVFGEQVYEGLDIITNKVTAQEQRMCQHHMISFVDPLVTNYTVVDFRNKATALI EDIFARDKIPIVVGGTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGHALHKRLSQVD PEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHAEEGGGPLGGPLKFPNLCILWLHADQT VLDERLDKRVDDMLAAGLLDELRDFHRRYNQKKVAENSQDYQHGIFQSIGFKEFHEYLVTEGKC TPETSNQLLKKGIESLKQVTKRYARKQNRWVKNRFLSRPGPRVPPVYGLEVSDVSKWEECVLEP ALEIVQSFIQGHQPAAAPVKMPCNETENRRSHHMCDLCDRIIIGDREWAAHIKSKSHLHRLKKR RRLDSDAVTTIESPSISSDHEKELKEKGSLGQNEKELESSV hide sequence

RefSeq Acc Id:	XP_532548 ⟸ XM_532548
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0P200 (UniProtKB/TrEMBL), A0A8I3NKM0 (UniProtKB/TrEMBL), A0A8C0SMN1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAAAARAVSVGSGLRGLPRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVYEGLD IITNKVTAQEQRMCQHHMISFVDPLVTNYTVVDFRNKATALIEDIFARDKIPIVVGGTNYYIES LLWKVLVNTKPQEMGTEKVIDRKVELEKEDGHALHKRLSQVDPEMAAKLHPHDKRKVARSLQVF EETGISHSEFLHRQHAEEGGGPLGGPLKFPNLCILWLHADQTVLDERLDKRVDDMLAAGLLDEL RDFHRRYNQKKVAENSQDYQHGIFQSIGFKEFHEYLVTEGKCTPETSNQLLKKGIESLKQVTKR YARKQNRWVKNRFLSRPGPRVPPVYGLEVSDVSKWEECVLEPALEIVQSFIQGHQPAAAPVKMP CNETENRRSHHMCDLCDRIIIGDREWAAHIKSKSHLHRLKKRRRLDSDAVTTIESPSISSDHEK ELKEKGSLGQNEKELESSV hide sequence

RefSeq Acc Id:	XP_022283474 ⟸ XM_022427766
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGIKILLVYEGLDIITNKVTAQEQRMCQHHMISFVDPLVTNYTVVDFRNKATALIEDIFARDKI PIVVGGTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGHALHKRLSQVDPEMAAKLHP HDKRKVARSLQVFEETGISHSEFLHRQHAEEGGGPLGGPLKFPNLCILWLHADQTVLDERLDKR VDDMLAAGLLDELRDFHRRYNQKKVAENSQDYQHGIFQSIGFKEFHEYLVTEGKCTPETSNQLL KKGIESLKQVTKRYARKQNRWVKNRFLSRPGPRVPPVYGLEVSDVSKWEECVLEPALEIVQSFI QGHQPAAAPVKMPCNETENRRSHHMCDLCDRIIIGDREWAAHIKSKSHLHRLKKRRRLDSDAVT TIESPSISSDHEKELKEKGSLGQNEKELESSV hide sequence

RefSeq Acc Id:

ENSCAFP00000004550 ⟸ ENSCAFT00000004911

RefSeq Acc Id:

ENSCAFP00000049177 ⟸ ENSCAFT00000073395

RefSeq Acc Id:	XP_038351349 ⟸ XM_038495421
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038351346 ⟸ XM_038495418
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038351347 ⟸ XM_038495419
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038351348 ⟸ XM_038495420
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038477580 ⟸ XM_038621652
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038477578 ⟸ XM_038621650
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038477579 ⟸ XM_038621651
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038543363 ⟸ XM_038687435
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038543360 ⟸ XM_038687432
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0P200 (UniProtKB/TrEMBL), A0A8I3NKM0 (UniProtKB/TrEMBL), A0A8C0SMN1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038543361 ⟸ XM_038687433
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038543362 ⟸ XM_038687434
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038307644 ⟸ XM_038451716
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038413707 ⟸ XM_038557779
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038413704 ⟸ XM_038557776
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0P200 (UniProtKB/TrEMBL), A0A8C0SMN1 (UniProtKB/TrEMBL), A0A8I3NKM0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038413705 ⟸ XM_038557777
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038413706 ⟸ XM_038557778
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JV08 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845015813 ⟸ ENSCAFT00845020175

RefSeq Acc Id:

ENSCAFP00845015686 ⟸ ENSCAFT00845020021

RefSeq Acc Id:

ENSCAFP00845015774 ⟸ ENSCAFT00845020124

Protein Domains

U1-type

Promoters

RGD ID:

13685848

Promoter ID:

EPDNEW_C3916

Type:

single initiation site

Name:

TRIT1_1

Description:

tRNA isopentenyltransferase 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	3,024,010 - 3,024,070	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000003048	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030020421	UniProtKB/TrEMBL
	ENSCAFG00040014187	UniProtKB/TrEMBL
	ENSCAFG00845011261	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000004911.5	UniProtKB/TrEMBL
	ENSCAFT00030037820.1	UniProtKB/TrEMBL
	ENSCAFT00040026823.1	UniProtKB/TrEMBL
	ENSCAFT00040026860.1	UniProtKB/TrEMBL
	ENSCAFT00040026910.1	UniProtKB/TrEMBL
	ENSCAFT00040027000.1	UniProtKB/TrEMBL
	ENSCAFT00845020021	ENTREZGENE
	ENSCAFT00845020021.1	UniProtKB/TrEMBL
	ENSCAFT00845020124	ENTREZGENE
	ENSCAFT00845020124.1	UniProtKB/TrEMBL
	ENSCAFT00845020175	ENTREZGENE
	ENSCAFT00845020175.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.20.140	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
	Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain	UniProtKB/TrEMBL
InterPro	Dimethylallyltransferase	UniProtKB/TrEMBL
	IPP_transferase_euk	UniProtKB/TrEMBL
	IPT	UniProtKB/TrEMBL
	Matrin/U1-like-C_Znf_C2H2	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	Znf_C2H2_jaz	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
NCBI Gene	TRIT1	ENTREZGENE
PANTHER	PTHR11088	UniProtKB/TrEMBL
	TRNA DIMETHYLALLYLTRANSFERASE	UniProtKB/TrEMBL
Pfam	IPPT	UniProtKB/TrEMBL
	zf-C2H2_jaz	UniProtKB/TrEMBL
PIRSF	IPP_transferase	UniProtKB/TrEMBL
SMART	ZnF_U1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A8C0JV08	ENTREZGENE
	A0A8C0P200	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SMN1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SMN6_CANLF	UniProtKB/TrEMBL
	A0A8C0SPF5_CANLF	UniProtKB/TrEMBL
	A0A8C0YYJ3_CANLF	UniProtKB/TrEMBL
	A0A8I3NDD8_CANLF	UniProtKB/TrEMBL
	A0A8I3NH76_CANLF	UniProtKB/TrEMBL
	A0A8I3NKM0	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:47848	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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