FAN1 (FANCD2 and FANCI associated nuclease 1) - Rat Genome Database

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Gene: FAN1 (FANCD2 and FANCI associated nuclease 1) Canis lupus familiaris
Analyze
Symbol: FAN1
Name: FANCD2 and FANCI associated nuclease 1
RGD ID: 12116877
Description: ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); nucleotide-excision repair (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); chromosome 15q13.3 microdeletion syndrome (ortholog); FOUND IN cytosol (ortholog); intercellular bridge (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FANCD2/FANCI-associated nuclease 1; fanconi-associated nuclease 1; MTMR15; myotubularin related protein 15
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1338,013,744 - 38,053,096 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl338,013,739 - 38,052,202 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha340,698,132 - 40,737,657 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0338,394,079 - 38,430,387 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl338,392,475 - 38,430,053 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1337,919,389 - 37,955,716 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0338,179,558 - 38,215,917 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0338,383,672 - 38,423,530 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
FAN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1338,013,744 - 38,053,096 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl338,013,739 - 38,052,202 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha340,698,132 - 40,737,657 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0338,394,079 - 38,430,387 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl338,392,475 - 38,430,053 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1337,919,389 - 37,955,716 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0338,179,558 - 38,215,917 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0338,383,672 - 38,423,530 (-)NCBIUU_Cfam_GSD_1.0
FAN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381530,903,852 - 30,943,108 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1530,890,559 - 30,943,108 (+)EnsemblGRCh38hg38GRCh38
GRCh371531,196,055 - 31,235,311 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361528,983,421 - 29,022,600 (+)NCBINCBI36Build 36hg18NCBI36
Celera158,921,590 - 8,960,771 (+)NCBICelera
Cytogenetic Map15q13.3NCBI
HuRef158,373,082 - 8,412,209 (+)NCBIHuRef
CHM1_11531,186,878 - 31,226,131 (+)NCBICHM1_1
T2T-CHM13v2.01528,697,834 - 28,737,186 (+)NCBIT2T-CHM13v2.0
Fan1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39763,994,627 - 64,023,874 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl763,996,506 - 64,023,843 (-)EnsemblGRCm39 Ensembl
GRCm38764,345,385 - 64,374,128 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl764,346,758 - 64,374,095 (-)EnsemblGRCm38mm10GRCm38
MGSCv37771,491,644 - 71,518,981 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36764,225,708 - 64,253,042 (-)NCBIMGSCv36mm8
Celera761,791,712 - 61,822,604 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map734.64NCBI
Fan1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81127,327,098 - 127,356,807 (-)NCBIGRCr8
mRatBN7.21117,915,323 - 117,945,044 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1117,917,099 - 117,944,977 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1125,893,563 - 125,918,526 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01133,076,115 - 133,101,078 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01125,906,666 - 125,932,888 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01125,182,117 - 125,209,772 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1125,181,838 - 125,209,727 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01126,291,169 - 126,318,945 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41118,784,938 - 118,811,928 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1110,174,511 - 110,199,745 (-)NCBICelera
Cytogenetic Map1q22NCBI
Fan1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541629,722,280 - 29,757,742 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541629,722,280 - 29,757,960 (+)NCBIChiLan1.0ChiLan1.0
FAN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21619,710,997 - 19,751,128 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11524,435,150 - 24,475,583 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0159,395,348 - 9,435,434 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11528,355,689 - 28,472,109 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1528,433,749 - 28,473,211 (+)Ensemblpanpan1.1panPan2
Fan1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640145,384,633 - 145,418,106 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936483912,346 - 949,833 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936483916,377 - 949,833 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1143,913,551 - 143,961,646 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11143,919,695 - 143,961,678 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21159,865,134 - 159,907,029 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FAN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12651,720,822 - 51,759,652 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2651,725,017 - 51,759,413 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604889,067,263 - 89,105,386 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fan1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247681,923,777 - 1,955,255 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FAN1
313 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 5 20 4 6 4 6 6 12 10 6
Low 1 2 2 2 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005618269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005618270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005618271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005618272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014112363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014112364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_851557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002625025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002625026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000016444   ⟹   ENSCAFP00000015212
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl338,013,739 - 38,052,202 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000061278   ⟹   ENSCAFP00000054086
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl338,013,739 - 38,052,048 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000072070   ⟹   ENSCAFP00000053041
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl338,013,739 - 38,052,202 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000082465   ⟹   ENSCAFP00000059432
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl338,013,808 - 38,052,202 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845037905   ⟹   ENSCAFP00845029702
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl338,392,475 - 38,430,053 (-)Ensembl
RefSeq Acc Id: XM_005618269   ⟹   XP_005618326
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,013,744 - 38,052,767 (-)NCBI
Dog10K_Boxer_Tasha340,698,132 - 40,737,208 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005618270   ⟹   XP_005618327
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,013,744 - 38,052,944 (-)NCBI
Dog10K_Boxer_Tasha340,698,132 - 40,737,361 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005618271   ⟹   XP_005618328
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,013,744 - 38,053,096 (-)NCBI
Dog10K_Boxer_Tasha340,698,132 - 40,737,657 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005618272   ⟹   XP_005618329
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,013,744 - 38,052,861 (-)NCBI
Dog10K_Boxer_Tasha340,698,132 - 40,737,310 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014112363   ⟹   XP_013967838
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,013,744 - 38,052,619 (-)NCBI
Dog10K_Boxer_Tasha340,698,132 - 40,737,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014112364   ⟹   XP_013967839
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,017,364 - 38,052,619 (-)NCBI
Dog10K_Boxer_Tasha340,701,756 - 40,737,059 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038471676   ⟹   XP_038327604
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,919,389 - 37,955,099 (-)NCBI
RefSeq Acc Id: XM_038471677   ⟹   XP_038327605
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,919,389 - 37,955,716 (-)NCBI
RefSeq Acc Id: XM_038471678   ⟹   XP_038327606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,919,389 - 37,955,249 (-)NCBI
RefSeq Acc Id: XM_038471679   ⟹   XP_038327607
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,919,389 - 37,955,420 (-)NCBI
RefSeq Acc Id: XM_038471680   ⟹   XP_038327608
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,919,389 - 37,955,369 (-)NCBI
RefSeq Acc Id: XM_038471681   ⟹   XP_038327609
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,919,389 - 37,955,100 (-)NCBI
RefSeq Acc Id: XM_038471682   ⟹   XP_038327610
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,923,008 - 37,955,100 (-)NCBI
RefSeq Acc Id: XM_038532603   ⟹   XP_038388531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,383,672 - 38,422,903 (-)NCBI
RefSeq Acc Id: XM_038532604   ⟹   XP_038388532
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,383,672 - 38,423,530 (-)NCBI
RefSeq Acc Id: XM_038532605   ⟹   XP_038388533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,383,672 - 38,423,053 (-)NCBI
RefSeq Acc Id: XM_038532606   ⟹   XP_038388534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,383,672 - 38,423,234 (-)NCBI
RefSeq Acc Id: XM_038532607   ⟹   XP_038388535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,383,672 - 38,422,904 (-)NCBI
RefSeq Acc Id: XM_038532608   ⟹   XP_038388536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,387,292 - 38,422,904 (-)NCBI
RefSeq Acc Id: XM_038596907   ⟹   XP_038452835
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,179,558 - 38,215,917 (-)NCBI
RefSeq Acc Id: XM_038596909   ⟹   XP_038452837
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,179,558 - 38,215,468 (-)NCBI
RefSeq Acc Id: XM_038596910   ⟹   XP_038452838
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,179,558 - 38,215,621 (-)NCBI
RefSeq Acc Id: XM_038596911   ⟹   XP_038452839
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,179,558 - 38,215,562 (-)NCBI
RefSeq Acc Id: XM_038596912   ⟹   XP_038452840
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,179,558 - 38,215,570 (-)NCBI
RefSeq Acc Id: XM_038596913   ⟹   XP_038452841
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,179,558 - 38,215,319 (-)NCBI
RefSeq Acc Id: XM_038596914   ⟹   XP_038452842
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,183,182 - 38,215,320 (-)NCBI
RefSeq Acc Id: XM_038661118   ⟹   XP_038517046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,394,079 - 38,430,387 (-)NCBI
RefSeq Acc Id: XM_038661119   ⟹   XP_038517047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,394,079 - 38,429,938 (-)NCBI
RefSeq Acc Id: XM_038661120   ⟹   XP_038517048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,394,079 - 38,430,091 (-)NCBI
RefSeq Acc Id: XM_038661121   ⟹   XP_038517049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,394,079 - 38,430,032 (-)NCBI
RefSeq Acc Id: XM_038661122   ⟹   XP_038517050
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,394,079 - 38,430,040 (-)NCBI
RefSeq Acc Id: XM_038661123   ⟹   XP_038517051
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,394,079 - 38,429,789 (-)NCBI
RefSeq Acc Id: XM_038661124   ⟹   XP_038517052
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,397,703 - 38,429,790 (-)NCBI
RefSeq Acc Id: XM_851557   ⟹   XP_856650
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,013,744 - 38,052,854 (-)NCBI
Dog10K_Boxer_Tasha340,698,132 - 40,737,302 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002625025
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,013,744 - 38,052,619 (-)NCBI
Dog10K_Boxer_Tasha340,698,132 - 40,737,060 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002625026
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1338,017,363 - 38,052,619 (-)NCBI
Dog10K_Boxer_Tasha340,701,754 - 40,737,061 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005323249
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,919,389 - 37,955,101 (-)NCBI
RefSeq Acc Id: XR_005323250
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1337,923,006 - 37,955,102 (-)NCBI
RefSeq Acc Id: XR_005356908
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,383,672 - 38,422,905 (-)NCBI
RefSeq Acc Id: XR_005356909
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0338,387,290 - 38,422,906 (-)NCBI
RefSeq Acc Id: XR_005391432
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,179,558 - 38,215,321 (-)NCBI
RefSeq Acc Id: XR_005391433
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0338,183,180 - 38,215,321 (-)NCBI
RefSeq Acc Id: XR_005424450
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,394,079 - 38,429,791 (-)NCBI
RefSeq Acc Id: XR_005424451
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0338,397,701 - 38,429,791 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005618326 (Get FASTA)   NCBI Sequence Viewer  
  XP_005618327 (Get FASTA)   NCBI Sequence Viewer  
  XP_005618328 (Get FASTA)   NCBI Sequence Viewer  
  XP_005618329 (Get FASTA)   NCBI Sequence Viewer  
  XP_013967838 (Get FASTA)   NCBI Sequence Viewer  
  XP_013967839 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327604 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327605 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327607 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327609 (Get FASTA)   NCBI Sequence Viewer  
  XP_038327610 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388532 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388535 (Get FASTA)   NCBI Sequence Viewer  
  XP_038388536 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452835 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452837 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452838 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452839 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452840 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452841 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452842 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517046 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517047 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517048 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517049 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517050 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517051 (Get FASTA)   NCBI Sequence Viewer  
  XP_038517052 (Get FASTA)   NCBI Sequence Viewer  
  XP_856650 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000015212.4
  ENSCAFP00000054086.2
  ENSCAFP00000059432.2
  ENSCAFP00030005860.1
  ENSCAFP00030005875.1
  ENSCAFP00030005892.1
  ENSCAFP00030005902.1
  ENSCAFP00030005919.1
  ENSCAFP00040031012.1
  ENSCAFP00040031094.1
  ENSCAFP00040031172.1
  ENSCAFP00040031228.1
  ENSCAFP00040031306.1
  ENSCAFP00845029702
  ENSCAFP00845029702.1
RefSeq Acc Id: XP_005618328   ⟸   XM_005618271
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SFF1 (UniProtKB/TrEMBL),   A0A8C0T3F4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005618327   ⟸   XM_005618270
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SFF1 (UniProtKB/TrEMBL),   A0A8C0T3F4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005618329   ⟸   XM_005618272
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SFF1 (UniProtKB/TrEMBL),   A0A8C0T3F4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_856650   ⟸   XM_851557
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SFF1 (UniProtKB/TrEMBL),   A0A8C0T3F4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005618326   ⟸   XM_005618269
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SFF1 (UniProtKB/TrEMBL),   A0A8C0T3F4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013967838   ⟸   XM_014112363
- Peptide Label: isoform X2
- UniProtKB: A0A8P0P3K3 (UniProtKB/TrEMBL),   A0A8C0T3F4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013967839   ⟸   XM_014112364
- Peptide Label: isoform X3
- UniProtKB: A0A8P0P8H3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000053041   ⟸   ENSCAFT00000072070
RefSeq Acc Id: ENSCAFP00000059432   ⟸   ENSCAFT00000082465
RefSeq Acc Id: ENSCAFP00000015212   ⟸   ENSCAFT00000016444
RefSeq Acc Id: ENSCAFP00000054086   ⟸   ENSCAFT00000061278
RefSeq Acc Id: XP_038327605   ⟸   XM_038471677
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038327607   ⟸   XM_038471679
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038327608   ⟸   XM_038471680
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038327606   ⟸   XM_038471678
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038327609   ⟸   XM_038471681
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038327604   ⟸   XM_038471676
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038327610   ⟸   XM_038471682
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038452835   ⟸   XM_038596907
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038452838   ⟸   XM_038596910
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038452840   ⟸   XM_038596912
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038452839   ⟸   XM_038596911
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038452837   ⟸   XM_038596909
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038452841   ⟸   XM_038596913
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038452842   ⟸   XM_038596914
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038517046   ⟸   XM_038661118
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MAV8 (UniProtKB/TrEMBL),   A0A8I3PL86 (UniProtKB/TrEMBL),   A0A8C0M3S1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517048   ⟸   XM_038661120
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MAV8 (UniProtKB/TrEMBL),   A0A8I3PL86 (UniProtKB/TrEMBL),   A0A8C0M3S1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517050   ⟸   XM_038661122
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MAV8 (UniProtKB/TrEMBL),   A0A8I3PL86 (UniProtKB/TrEMBL),   A0A8C0M3S1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517049   ⟸   XM_038661121
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MAV8 (UniProtKB/TrEMBL),   A0A8I3PL86 (UniProtKB/TrEMBL),   A0A8C0M3S1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517047   ⟸   XM_038661119
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MAV8 (UniProtKB/TrEMBL),   A0A8I3PL86 (UniProtKB/TrEMBL),   A0A8C0M3S1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517051   ⟸   XM_038661123
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RBY5 (UniProtKB/TrEMBL),   A0A8C0M3S1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517052   ⟸   XM_038661124
- Peptide Label: isoform X3
- UniProtKB: A0A8C0M7E5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388532   ⟸   XM_038532604
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T3F4 (UniProtKB/TrEMBL),   A0A8C0T694 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388534   ⟸   XM_038532606
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T3F4 (UniProtKB/TrEMBL),   A0A8C0T694 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388533   ⟸   XM_038532605
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T3F4 (UniProtKB/TrEMBL),   A0A8C0T694 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388535   ⟸   XM_038532607
- Peptide Label: isoform X2
- UniProtKB: A0A8C0T3F4 (UniProtKB/TrEMBL),   A0A8C0Z278 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388531   ⟸   XM_038532603
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T3F4 (UniProtKB/TrEMBL),   A0A8C0T694 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388536   ⟸   XM_038532608
- Peptide Label: isoform X3
- UniProtKB: A0A8C0T5A8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845029702   ⟸   ENSCAFT00845037905
Protein Domains
UBZ4-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000010347 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030003568 UniProtKB/TrEMBL
  ENSCAFG00040019231 UniProtKB/TrEMBL
  ENSCAFG00845021476 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000016444.5 UniProtKB/TrEMBL
  ENSCAFT00000061278.2 UniProtKB/TrEMBL
  ENSCAFT00000082465.2 UniProtKB/TrEMBL
  ENSCAFT00030006675.1 UniProtKB/TrEMBL
  ENSCAFT00030006691.1 UniProtKB/TrEMBL
  ENSCAFT00030006709.1 UniProtKB/TrEMBL
  ENSCAFT00030006720.1 UniProtKB/TrEMBL
  ENSCAFT00030006741.1 UniProtKB/TrEMBL
  ENSCAFT00040035609.1 UniProtKB/TrEMBL
  ENSCAFT00040035706.1 UniProtKB/TrEMBL
  ENSCAFT00040035785.1 UniProtKB/TrEMBL
  ENSCAFT00040035850.1 UniProtKB/TrEMBL
  ENSCAFT00040035937.1 UniProtKB/TrEMBL
  ENSCAFT00845037905 ENTREZGENE
  ENSCAFT00845037905.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.1350.10 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro Fan1-like UniProtKB/TrEMBL
  FAN1-like_euk UniProtKB/TrEMBL
  FAN1-like_TPR UniProtKB/TrEMBL
  FAN1-like_WH UniProtKB/TrEMBL
  Fan1_SAP_met UniProtKB/TrEMBL
  Rad18_UBZ4 UniProtKB/TrEMBL
  tRNA_endonuc-like_dom_sf UniProtKB/TrEMBL
  VRR_NUC UniProtKB/TrEMBL
NCBI Gene FAN1 ENTREZGENE
PANTHER FANCONI-ASSOCIATED NUCLEASE 1 UniProtKB/TrEMBL
  PTHR15749 UniProtKB/TrEMBL
Pfam FAN1_HTH UniProtKB/TrEMBL
  Fan1_SAP UniProtKB/TrEMBL
  FAN1_TPR UniProtKB/TrEMBL
  VRR_NUC UniProtKB/TrEMBL
PROSITE ZF_UBZ4 UniProtKB/TrEMBL
SMART VRR_NUC UniProtKB/TrEMBL
  ZnF_Rad18 UniProtKB/TrEMBL
UniProt A0A8C0M3S1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0M3S9_CANLF UniProtKB/TrEMBL
  A0A8C0M7E5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MAV8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RBY5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T3F4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T5A8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T5Z9_CANLF UniProtKB/TrEMBL
  A0A8C0T694 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Z278 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PL86 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P3K3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P8H3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SFF1 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:40715 ENTREZGENE