CATSPER3 (cation channel sperm associated 3) - Rat Genome Database

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Gene: CATSPER3 (cation channel sperm associated 3) Canis lupus familiaris
Analyze
Symbol: CATSPER3
Name: cation channel sperm associated 3
RGD ID: 12101836
Description: ENCODES a protein that exhibits monoatomic ion channel activity (inferred); voltage-gated calcium channel activity (inferred); INVOLVED IN establishment of localization in cell (ortholog); flagellated sperm motility (ortholog); sodium ion transport (ortholog); ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN acrosomal vesicle (inferred); CatSper complex (inferred); endoplasmic reticulum (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cation channel sperm-associated protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11123,018,770 - 23,057,945 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1123,021,663 - 23,052,820 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1121,768,102 - 21,807,475 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01123,825,102 - 23,864,516 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1123,828,241 - 23,859,391 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11122,524,303 - 22,563,684 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01122,390,242 - 22,429,630 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01123,032,998 - 23,072,408 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
CATSPER3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11123,018,770 - 23,057,945 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1123,021,663 - 23,052,820 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1121,768,102 - 21,807,475 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01123,825,102 - 23,864,516 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1123,828,241 - 23,859,391 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11122,524,303 - 22,563,684 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01122,390,242 - 22,429,630 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01123,032,998 - 23,072,408 (+)NCBIUU_Cfam_GSD_1.0
CATSPER3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385134,967,907 - 135,011,696 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5134,967,907 - 135,011,696 (+)EnsemblGRCh38hg38GRCh38
GRCh375134,303,597 - 134,347,386 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365134,331,513 - 134,375,285 (+)NCBINCBI36Build 36hg18NCBI36
Build 345134,331,512 - 134,375,285NCBI
Celera5130,427,337 - 130,471,182 (+)NCBICelera
Cytogenetic Map5q31.1NCBI
HuRef5129,491,536 - 129,535,385 (+)NCBIHuRef
CHM1_15133,736,243 - 133,780,066 (+)NCBICHM1_1
T2T-CHM13v2.05135,494,874 - 135,538,709 (+)NCBIT2T-CHM13v2.0
Catsper3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,932,313 - 55,971,861 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1355,932,381 - 55,956,811 (+)EnsemblGRCm39 Ensembl
GRCm381355,784,500 - 55,824,048 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,784,568 - 55,808,998 (+)EnsemblGRCm38mm10GRCm38
MGSCv371355,885,940 - 55,910,359 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361355,794,201 - 55,818,620 (+)NCBIMGSCv36mm8
Celera1356,835,127 - 56,859,609 (+)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1330.06NCBI
Catsper3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8178,820,738 - 8,846,063 (-)NCBIGRCr8
mRatBN7.2178,810,122 - 8,840,881 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,815,561 - 8,840,864 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx178,830,656 - 8,856,459 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01710,363,260 - 10,385,736 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0178,827,039 - 8,852,840 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0178,900,034 - 8,925,385 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl178,900,036 - 8,925,503 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01711,065,010 - 11,090,156 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41714,856,781 - 14,891,047 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11714,857,795 - 14,919,947 (-)NCBI
Celera178,897,756 - 8,923,042 (-)NCBICelera
Cytogenetic Map17p14NCBI
Catsper3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540830,150,197 - 30,179,872 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540830,150,736 - 30,179,834 (+)NCBIChiLan1.0ChiLan1.0
CATSPER3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24130,258,105 - 130,308,793 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15128,394,688 - 128,448,357 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05130,362,139 - 130,406,888 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15136,503,846 - 136,548,162 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5136,503,846 - 136,548,162 (+)Ensemblpanpan1.1panPan2
Catsper3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213123,137,841 - 123,169,698 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365972,166,262 - 2,194,550 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365972,164,339 - 2,194,562 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CATSPER3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2137,139,749 - 137,175,305 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12137,139,743 - 137,175,305 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Pig Cytomap2q27-28NCBI
CATSPER3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12337,740,072 - 37,791,261 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2337,743,673 - 37,791,176 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603440,124,763 - 40,171,804 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Catsper3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473312,050,715 - 12,114,160 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473312,050,823 - 12,084,546 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CATSPER3
313 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 8
Low 2 2 1
Below cutoff 5 5 20 6 6 6 6 6 10 10 5

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005626553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005626555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038659884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038659919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_538633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002631361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005333058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005366692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005401146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005434517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000001629   ⟹   ENSCAFP00000001498
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1123,021,663 - 23,052,820 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845024679   ⟹   ENSCAFP00845019423
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1123,828,241 - 23,859,391 (+)Ensembl
RefSeq Acc Id: XM_005626553   ⟹   XP_005626610
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11123,018,770 - 23,052,814 (+)NCBI
Dog10K_Boxer_Tasha1121,768,106 - 21,806,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005626555   ⟹   XP_005626612
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11123,018,770 - 23,052,814 (+)NCBI
Dog10K_Boxer_Tasha1121,768,107 - 21,806,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022425317   ⟹   XP_022281025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11123,018,770 - 23,052,814 (+)NCBI
Dog10K_Boxer_Tasha1121,768,102 - 21,806,561 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038490131   ⟹   XP_038346059
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11122,524,309 - 22,562,770 (+)NCBI
RefSeq Acc Id: XM_038490132   ⟹   XP_038346060
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11122,527,442 - 22,562,770 (+)NCBI
RefSeq Acc Id: XM_038490133   ⟹   XP_038346061
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11122,524,307 - 22,562,770 (+)NCBI
RefSeq Acc Id: XM_038490134   ⟹   XP_038346062
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11122,524,303 - 22,562,770 (+)NCBI
RefSeq Acc Id: XM_038490135   ⟹   XP_038346063
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11122,524,303 - 22,562,770 (+)NCBI
RefSeq Acc Id: XM_038490136   ⟹   XP_038346064
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11122,524,308 - 22,562,770 (+)NCBI
RefSeq Acc Id: XM_038552206   ⟹   XP_038408134
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01123,033,004 - 23,071,494 (+)NCBI
RefSeq Acc Id: XM_038552207   ⟹   XP_038408135
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01123,036,137 - 23,071,494 (+)NCBI
RefSeq Acc Id: XM_038552208   ⟹   XP_038408136
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01123,033,002 - 23,071,494 (+)NCBI
RefSeq Acc Id: XM_038552209   ⟹   XP_038408137
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01123,032,998 - 23,071,494 (+)NCBI
RefSeq Acc Id: XM_038552210   ⟹   XP_038408138
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01123,032,998 - 23,071,494 (+)NCBI
RefSeq Acc Id: XM_038552211   ⟹   XP_038408139
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01123,033,003 - 23,071,494 (+)NCBI
RefSeq Acc Id: XM_038616075   ⟹   XP_038472003
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01122,390,248 - 22,428,716 (+)NCBI
RefSeq Acc Id: XM_038616076   ⟹   XP_038472004
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01122,393,381 - 22,428,716 (+)NCBI
RefSeq Acc Id: XM_038616077   ⟹   XP_038472005
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01122,390,246 - 22,428,716 (+)NCBI
RefSeq Acc Id: XM_038616078   ⟹   XP_038472006
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01122,390,242 - 22,428,716 (+)NCBI
RefSeq Acc Id: XM_038616079   ⟹   XP_038472007
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01122,390,242 - 22,428,716 (+)NCBI
RefSeq Acc Id: XM_038616080   ⟹   XP_038472008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01122,390,247 - 22,428,716 (+)NCBI
RefSeq Acc Id: XM_038659884   ⟹   XP_038515812
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1121,768,108 - 21,806,561 (+)NCBI
RefSeq Acc Id: XM_038659919   ⟹   XP_038515847
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1121,768,102 - 21,806,561 (+)NCBI
RefSeq Acc Id: XM_038681563   ⟹   XP_038537491
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01123,825,108 - 23,863,602 (+)NCBI
RefSeq Acc Id: XM_038681564   ⟹   XP_038537492
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01123,828,241 - 23,863,602 (+)NCBI
RefSeq Acc Id: XM_038681565   ⟹   XP_038537493
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01123,825,106 - 23,863,602 (+)NCBI
RefSeq Acc Id: XM_038681566   ⟹   XP_038537494
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01123,825,102 - 23,863,602 (+)NCBI
RefSeq Acc Id: XM_038681567   ⟹   XP_038537495
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01123,825,102 - 23,863,602 (+)NCBI
RefSeq Acc Id: XM_038681568   ⟹   XP_038537496
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01123,825,107 - 23,863,602 (+)NCBI
RefSeq Acc Id: XM_538633   ⟹   XP_538633
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11123,021,663 - 23,052,814 (+)NCBI
Dog10K_Boxer_Tasha1121,771,241 - 21,806,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002631361
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11123,018,770 - 23,057,945 (+)NCBI
Dog10K_Boxer_Tasha1121,768,108 - 21,807,475 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005333058
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11122,524,309 - 22,563,684 (+)NCBI
RefSeq Acc Id: XR_005366692
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01123,033,004 - 23,072,408 (+)NCBI
RefSeq Acc Id: XR_005401146
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01122,390,248 - 22,429,630 (+)NCBI
RefSeq Acc Id: XR_005434517
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01123,825,108 - 23,864,516 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005626610 (Get FASTA)   NCBI Sequence Viewer  
  XP_005626612 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281025 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346059 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346060 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346061 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346062 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346063 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346064 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408134 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408135 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408136 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408137 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408138 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408139 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472003 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472004 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472005 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472006 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472007 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472008 (Get FASTA)   NCBI Sequence Viewer  
  XP_038515812 (Get FASTA)   NCBI Sequence Viewer  
  XP_038515847 (Get FASTA)   NCBI Sequence Viewer  
  XP_038537491 (Get FASTA)   NCBI Sequence Viewer  
  XP_038537492 (Get FASTA)   NCBI Sequence Viewer  
  XP_038537493 (Get FASTA)   NCBI Sequence Viewer  
  XP_038537494 (Get FASTA)   NCBI Sequence Viewer  
  XP_038537495 (Get FASTA)   NCBI Sequence Viewer  
  XP_038537496 (Get FASTA)   NCBI Sequence Viewer  
  XP_538633 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000001498.3
  ENSCAFP00030012199.1
  ENSCAFP00040015566.1
  ENSCAFP00845019423
  ENSCAFP00845019423.1
Reference Protein Sequences
RefSeq Acc Id: XP_538633   ⟸   XM_538633
- Peptide Label: isoform X2
- UniProtKB: A0A8C0K2V9 (UniProtKB/TrEMBL),   A0A8C0S469 (UniProtKB/TrEMBL),   A0A8I3RXR2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005626612   ⟸   XM_005626555
- Peptide Label: isoform X5
- UniProtKB: J9P2N7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005626610   ⟸   XM_005626553
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022281025   ⟸   XM_022425317
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSCAFP00000001498   ⟸   ENSCAFT00000001629
RefSeq Acc Id: XP_038346062   ⟸   XM_038490134
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038346063   ⟸   XM_038490135
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038346061   ⟸   XM_038490133
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038346064   ⟸   XM_038490136
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038346059   ⟸   XM_038490131
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346060   ⟸   XM_038490132
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038472006   ⟸   XM_038616078
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038472007   ⟸   XM_038616079
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038472005   ⟸   XM_038616077
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038472008   ⟸   XM_038616080
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038472003   ⟸   XM_038616075
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472004   ⟸   XM_038616076
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038537494   ⟸   XM_038681566
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038537495   ⟸   XM_038681567
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038537493   ⟸   XM_038681565
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038537496   ⟸   XM_038681568
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038537491   ⟸   XM_038681563
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038537492   ⟸   XM_038681564
- Peptide Label: isoform X2
- UniProtKB: A0A8C0K2V9 (UniProtKB/TrEMBL),   A0A8C0S469 (UniProtKB/TrEMBL),   A0A8I3RXR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038515847   ⟸   XM_038659919
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038515812   ⟸   XM_038659884
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038408137   ⟸   XM_038552209
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038408138   ⟸   XM_038552210
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038408136   ⟸   XM_038552208
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038408139   ⟸   XM_038552211
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038408134   ⟸   XM_038552206
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038408135   ⟸   XM_038552207
- Peptide Label: isoform X2
- UniProtKB: A0A8C0K2V9 (UniProtKB/TrEMBL),   A0A8C0S469 (UniProtKB/TrEMBL),   A0A8I3RXR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845019423   ⟸   ENSCAFT00845024679
Protein Domains
Ion transport


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000001062 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030007585 UniProtKB/TrEMBL
  ENSCAFG00040009636 UniProtKB/TrEMBL
  ENSCAFG00845013828 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000001629.6 UniProtKB/TrEMBL
  ENSCAFT00030013970.1 UniProtKB/TrEMBL
  ENSCAFT00040017929.1 UniProtKB/TrEMBL
  ENSCAFT00845024679 ENTREZGENE
  ENSCAFT00845024679.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.20.120.350 UniProtKB/TrEMBL
InterPro Ion_trans_dom UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/TrEMBL
NCBI Gene CATSPER3 ENTREZGENE
PANTHER CATION CHANNEL SPERM-ASSOCIATED PROTEIN 3 UniProtKB/TrEMBL
  CATION CHANNEL SPERM-ASSOCIATED PROTEIN 3 UniProtKB/TrEMBL
Pfam Ion_trans UniProtKB/TrEMBL
Superfamily-SCOP Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A8C0K2V9 ENTREZGENE
  A0A8C0S469 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RXR2 ENTREZGENE, UniProtKB/TrEMBL
  J9P2N7 ENTREZGENE
VGNC ID VGNC:38746 ENTREZGENE