INSM2 (INSM transcriptional repressor 2)

Gene: INSM2 (INSM transcriptional repressor 2) Pan paniscus

Analyze

Symbol:

INSM2

Name:

INSM transcriptional repressor 2

RGD ID:

12033133

Description:

ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

insulinoma-associated protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	36,848,522 - 36,851,469 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	36,065,025 - 36,067,972 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	16,287,866 - 16,290,884 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	34,468,831 - 34,470,476 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brain-Lung-Thyroid Syndrome (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

INSM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	36,848,522 - 36,851,469 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	36,065,025 - 36,067,972 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	16,287,866 - 16,290,884 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	34,468,831 - 34,470,476 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

INSM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	35,534,164 - 35,537,054 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	35,534,164 - 35,537,054 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	36,003,370 - 36,006,260 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	35,072,999 - 35,076,011 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	35,072,998 - 35,076,011	NCBI
Celera	14	15,867,108 - 15,870,120 (+)	NCBI		Celera
Cytogenetic Map	14	q13.2	NCBI
HuRef	14	16,117,138 - 16,120,150 (+)	NCBI		HuRef
CHM1_1	14	36,002,929 - 36,005,941 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	29,721,890 - 29,724,780 (+)	NCBI		T2T-CHM13v2.0

Insm2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	55,646,212 - 55,648,818 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	55,646,212 - 55,648,871 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	55,598,917 - 55,602,018 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	55,599,427 - 55,602,086 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	56,699,904 - 56,703,005 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	56,517,603 - 56,519,084 (+)	NCBI		MGSCv36	mm8
Celera	12	56,748,546 - 56,751,647 (+)	NCBI		Celera
Cytogenetic Map	12	C1	NCBI
cM Map	12	24.05	NCBI

Insm2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	78,708,983 - 78,711,575 (+)	NCBI		GRCr8
mRatBN7.2	6	72,973,861 - 72,976,453 (+)	NCBI	mRatBN7.2	mRatBN7.2
UTH_Rnor_SHR_Utx	6	73,395,488 - 73,398,078 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	73,701,858 - 73,704,448 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	73,129,368 - 73,131,958 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	76,380,681 - 76,386,240 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	76,383,446 - 76,384,933 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	85,914,501 - 85,919,811 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	75,846,090 - 75,847,587 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	75,849,225 - 75,850,715 (+)	NCBI
Celera	6	71,812,955 - 71,818,504 (+)	NCBI		Celera
Cytogenetic Map	6	q23	NCBI

Insm2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	25,584,904 - 25,585,998 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955409	25,584,543 - 25,586,025 (-)	NCBI	ChiLan1.0	ChiLan1.0

INSM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	14,217,694 - 14,220,661 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	14,217,785 - 14,219,458 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	14,013,937 - 14,016,656 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	14,324,080 - 14,326,798 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	14,324,080 - 14,325,753 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	14,025,158 - 14,027,875 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	14,090,754 - 14,093,472 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	14,380,468 - 14,383,186 (+)	NCBI		UU_Cfam_GSD_1.0

Insm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	46,139,681 - 46,142,555 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936494	9,645,673 - 9,647,361 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936494	9,645,568 - 9,648,449 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

INSM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	64,374,823 - 64,376,495 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	64,372,361 - 64,378,366 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	69,282,117 - 69,285,979 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

INSM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	12,340,659 - 12,343,663 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	12,340,864 - 12,342,570 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	1,305,073 - 1,308,143 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Insm2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624838	1,271,100 - 1,272,764 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624838	1,269,909 - 1,272,849 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_024925505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_024925505 ⟹ XP_024781273

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	36,848,522 - 36,851,469 (+)	NCBI
NHGRI_mPanPan1	14	36,065,025 - 36,067,972 (+)	NCBI
Mhudiblu_PPA_v0	14	16,287,866 - 16,290,884 (+)	NCBI
PanPan1.1	14	34,468,831 - 34,470,476 (+)	NCBI

Sequence:

show sequence

ATGCCAAGGGGATTCCTGGTGAAGCGAACTAAACGGACAGGCGGCTCGTACCGAGTTCGCCTTG
CGGAGCGTGTCTTCCCTCTGCTGGGGCCCCAGGGGGCGCCGCCCTTCTTGGAGGAGGCTCCCAG
CGCCTCCTTGCCCGGCGCGGAGCGGGCGGCACCCCCCACCCGAGAGGAACCAGGAAAGGGGTTG
ACGGCGGAGGCGGCCCGGGAACAGTCGGGGTCGCCATGTCGGGCGGCTGGGGTGAGCCCGGGGA
CGGGCGGGCGGGAAGGCGCGGAGTGGCGGGCGGGTGGCAGGGAAGGTCCCGGGCCCAGCCCCAG
CCCCAGCCCCAGCCCCAGCCCCAGTCCAGCGAAGCCGGCAGGCGCAGAGCTGCGTCGGGCGTTC
CTGGAGCGCTGCCTCAGCTCGCCCGTCTCCGCCGAGTCTTTCCCCNGGGGCGCCGCCGCCGTGG
CCGCTTTCTCCTGCTCCGTGGCGCCAGCAGCCGCACCGACCTCGGGGGAGCAGTTTCTGCTGCC
GCTTCGGGCGCCGTTCCCAGAGCCCGCGCTTCAGCCGGACCCTGCGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGAAGCCAAAGGCCATGAGGAAGTTGAGCTTTGCCGATGAGG
TGACCACATCCCCTGTCCTGGGCCTGAAGATCAAGGAGGAGGAGCCCGGAGCGCCGTCCCGGGG
CNTTGGGGGCAGCCGCACGCCACTGGGGGAGTTCATCTGCCAGCTGTGCAAGGAGCAGTACGCA
GACCCCTTCGCGCTGGCCCAGCACCGCTGCTCCCGCATCGTGCGCGTAGAGTACCGCTGCCCTG
AGTGCGACAAGGTGTTCAGCTGTCCTGCGAACCTGGCCTCCCATCGCCGCTGGCATAAGCCGCG
TCCCGCGGCTGCAAACGCCGCCACAGTCTCCTCCGCCGACGGGAAGCCGCCTTCTTCGTCGTCT
TCGTCCTCCCGGGACTCCGGGGCCATTGCATCTTTTCTGGCGGAGGGAAAGGAGAACAGCCGAA
TAGAGCGGACTGCGGATCAGCACCCGCAGGCCAGGGACAGCTCCGGGGCGGATCAGCACCCGGA
CAGCGCCCCGAGGCAGGGCCTCCAGGTGCTGACGCATCCAGAGCCACCGCTGCCTCAGGGCCCC
TACACGGAGGGGGTGTTGGGGCGCCGGGTACCTGTGCCGGGCAGTACCAGTGGTGGCAGGGGAT
CCGAGATTTTCGTGTGCCCATATTGCCACAAAAAGTTTCGTCGCCAAGCCTATCTGCGCAAGCA
CCTGAGTACTCACGAGGCGGGCTCGGCCCGTGCGCTAGCGCCTGGCTTTGGCTCCGAACGCGGT
GCCCCACTTGCCTTCGCTTGCCCATTGTGCGGAGCGCACTTCCCTACAGCAGATATCAGGGAGA
AGCACCGGCTGTGGCATGCTGTCCGCGAGGAGCTGCTCCTGCCCGCTCTGGCGGGGGCTCCTCC
CGAAACGTCGGGCCCTAGCGGGCCATCTGACGGGAGTGCCCAGCAAATTTTCTCGTGCAAGCAC
TGCCCGTCCACTTTTTTTAGCTCTCCAGGGCTGACCCGGCACATCAATAAGTGCCACCCCTCAG
AAAGCCGGCAAGTGCTGCTGCTGCAGATGCCACTGCGGCCTGGCTGCTGA

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Protein Sequences


Protein RefSeqs	XP_024781273	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_024781273 ⟸ XM_024925505

- Sequence:

show sequence

MPRGFLVKRTKRTGGSYRVRLAERVFPLLGPQGAPPFLEEAPSASLPGAERAAPPTREEPGKGL
TAEAAREQSGSPCRAAGVSPGTGGREGAEWRAGGREGPGPSPSPSPSPSPSPAKPAGAELRRAF
LERCLSSPVSAESFPXGAAAVAAFSCSVAPAAAPTSGEQFLLPLRAPFPEPALQPDPAXXXXXX
XXXXXXXXKPKAMRKLSFADEVTTSPVLGLKIKEEEPGAPSRGXGGSRTPLGEFICQLCKEQYA
DPFALAQHRCSRIVRVEYRCPECDKVFSCPANLASHRRWHKPRPAAANAATVSSADGKPPSSSS
SSSRDSGAIASFLAEGKENSRIERTADQHPQARDSSGADQHPDSAPRQGLQVLTHPEPPLPQGP
YTEGVLGRRVPVPGSTSGGRGSEIFVCPYCHKKFRRQAYLRKHLSTHEAGSARALAPGFGSERG
APLAFACPLCGAHFPTADIREKHRLWHAVREELLLPALAGAPPETSGPSGPSDGSAQQIFSCKH
CPSTFFSSPGLTRHINKCHPSESRQVLLLQMPLRPGC

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Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	INSM2	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar