PRR29 (proline rich 29) - Rat Genome Database

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Gene: PRR29 (proline rich 29) Pan paniscus
Analyze
Symbol: PRR29
Name: proline rich 29
RGD ID: 11950065
Description: ASSOCIATED WITH hyperkalemic periodic paralysis (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: proline-rich protein 29
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21980,180,827 - 80,186,445 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11785,001,135 - 85,007,211 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01758,091,540 - 58,097,626 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11763,186,087 - 63,191,603 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1763,186,087 - 63,191,603 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
PRR29
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21980,180,827 - 80,186,445 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11785,001,135 - 85,007,211 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01758,091,540 - 58,097,626 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11763,186,087 - 63,191,603 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1763,186,087 - 63,191,603 (+)Ensemblpanpan1.1panPan2
PRR29
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381763,998,351 - 64,004,305 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1763,998,351 - 64,004,305 (+)EnsemblGRCh38hg38GRCh38
GRCh371762,075,711 - 62,081,665 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361759,429,449 - 59,435,396 (+)NCBINCBI36Build 36hg18NCBI36
Celera1756,463,786 - 56,469,714 (+)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1757,443,369 - 57,449,297 (+)NCBIHuRef
CHM1_11762,139,629 - 62,145,545 (+)NCBICHM1_1
T2T-CHM13v2.01764,869,129 - 64,875,081 (+)NCBIT2T-CHM13v2.0
Prr29
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911106,255,838 - 106,267,940 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11106,256,298 - 106,268,384 (+)EnsemblGRCm39 Ensembl
GRCm3811106,374,762 - 106,377,114 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,365,472 - 106,377,558 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711106,236,140 - 106,238,428 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611106,181,562 - 106,193,204 (+)NCBIMGSCv36mm8
Celera11118,106,165 - 118,108,453 (+)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1169.05NCBI
Prr29
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81091,804,291 - 91,810,213 (+)NCBIGRCr8
mRatBN7.21091,305,820 - 91,320,661 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1091,305,723 - 91,310,439 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01094,565,498 - 94,569,926 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1094,566,928 - 94,569,366 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01094,313,579 - 94,317,888 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41095,769,680 - 95,772,074 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11095,784,049 - 95,786,444 (+)NCBI
Celera1089,977,835 - 89,982,263 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Prr29
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554787,847,903 - 7,854,667 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554787,851,993 - 7,857,147 (-)NCBIChiLan1.0ChiLan1.0
PRR29
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1911,900,474 - 11,902,961 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl911,899,680 - 11,902,774 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0913,561,457 - 13,563,939 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1912,508,255 - 12,510,736 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0915,021,541 - 15,024,021 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0915,023,693 - 15,026,177 (-)NCBIUU_Cfam_GSD_1.0
Prr29
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560214,597,733 - 14,602,631 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365414,592,066 - 4,594,272 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365414,592,066 - 4,594,272 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRR29
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1214,991,419 - 14,995,568 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11214,992,316 - 14,995,393 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21214,984,201 - 14,988,539 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PRR29
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11657,269,916 - 57,273,941 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1657,270,445 - 57,273,700 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607727,880,453 - 27,886,046 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prr29
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248491,489,820 - 1,496,968 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248491,489,003 - 1,493,102 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSPPAT00000027516   ⟹   ENSPPAP00000006351
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1763,186,087 - 63,191,603 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000027542   ⟹   ENSPPAP00000006362
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1763,186,095 - 63,189,084 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000027543   ⟹   ENSPPAP00000006363
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1763,186,095 - 63,188,843 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000027546   ⟹   ENSPPAP00000006364
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1763,186,095 - 63,188,843 (+)Ensembl
RefSeq Acc Id: XM_003811359   ⟹   XP_003811407
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,837 - 80,186,445 (+)NCBI
NHGRI_mPanPan11785,001,146 - 85,007,211 (+)NCBI
Mhudiblu_PPA_v01758,091,549 - 58,097,626 (+)NCBI
PanPan1.11763,186,087 - 63,191,603 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003811360   ⟹   XP_003811408
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,842 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,149 - 85,005,355 (+)NCBI
Mhudiblu_PPA_v01758,091,554 - 58,097,590 (+)NCBI
PanPan1.11763,186,087 - 63,191,603 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008963774   ⟹   XP_008962022
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,834 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,144 - 85,005,355 (+)NCBI
Mhudiblu_PPA_v01758,091,546 - 58,095,066 (+)NCBI
PanPan1.11763,186,087 - 63,189,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008963775   ⟹   XP_008962023
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,831 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,141 - 85,005,355 (+)NCBI
Mhudiblu_PPA_v01758,091,542 - 58,097,626 (+)NCBI
PanPan1.11763,186,091 - 63,191,603 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008963778   ⟹   XP_008962026
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,903 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,216 - 85,005,355 (+)NCBI
Mhudiblu_PPA_v01758,091,664 - 58,097,626 (+)NCBI
PanPan1.11763,186,087 - 63,191,603 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034942718   ⟹   XP_034798609
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,839 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,148 - 85,005,355 (+)NCBI
Mhudiblu_PPA_v01758,091,552 - 58,095,789 (+)NCBI
RefSeq Acc Id: XM_034942719   ⟹   XP_034798610
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,842 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,150 - 85,005,355 (+)NCBI
Mhudiblu_PPA_v01758,091,554 - 58,095,789 (+)NCBI
RefSeq Acc Id: XM_034942720   ⟹   XP_034798611
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,834 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,143 - 85,005,355 (+)NCBI
Mhudiblu_PPA_v01758,091,546 - 58,097,626 (+)NCBI
RefSeq Acc Id: XM_034942721   ⟹   XP_034798612
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,827 - 80,184,115 (+)NCBI
NHGRI_mPanPan11785,001,135 - 85,004,432 (+)NCBI
Mhudiblu_PPA_v01758,091,540 - 58,094,866 (+)NCBI
RefSeq Acc Id: XM_055102144   ⟹   XP_054958119
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21980,180,844 - 80,185,034 (+)NCBI
NHGRI_mPanPan11785,001,151 - 85,005,355 (+)NCBI
RefSeq Acc Id: XP_003811407   ⟸   XM_003811359
- Peptide Label: isoform X6
- UniProtKB: A0A2R8ZU15 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003811408   ⟸   XM_003811360
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZR19 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008962026   ⟸   XM_008963778
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_008962022   ⟸   XM_008963774
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_008962023   ⟸   XM_008963775
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034798612   ⟸   XM_034942721
- Peptide Label: isoform X10
RefSeq Acc Id: XP_034798611   ⟸   XM_034942720
- Peptide Label: isoform X7
RefSeq Acc Id: XP_034798609   ⟸   XM_034942718
- Peptide Label: isoform X3
- UniProtKB: A0A2R8ZR19 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034798610   ⟸   XM_034942719
- Peptide Label: isoform X4
RefSeq Acc Id: ENSPPAP00000006364   ⟸   ENSPPAT00000027546
RefSeq Acc Id: ENSPPAP00000006363   ⟸   ENSPPAT00000027543
RefSeq Acc Id: ENSPPAP00000006362   ⟸   ENSPPAT00000027542
RefSeq Acc Id: ENSPPAP00000006351   ⟸   ENSPPAT00000027516
RefSeq Acc Id: XP_054958119   ⟸   XM_055102144
- Peptide Label: isoform X8
Protein Domains
DUF4587


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000024924 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000027516.1 UniProtKB/TrEMBL
  ENSPPAT00000027542.1 UniProtKB/TrEMBL
  ENSPPAT00000027543.1 UniProtKB/TrEMBL
  ENSPPAT00000027546.1 UniProtKB/TrEMBL
InterPro DUF4587 UniProtKB/TrEMBL
  PRR29-like UniProtKB/TrEMBL
NCBI Gene PRR29 ENTREZGENE
PANTHER PROLINE-RICH PROTEIN 29 UniProtKB/TrEMBL
  PTHR28604 UniProtKB/TrEMBL
Pfam DUF4587 UniProtKB/TrEMBL
UniProt A0A2R8ZN34_PANPA UniProtKB/TrEMBL
  A0A2R8ZN37_PANPA UniProtKB/TrEMBL
  A0A2R8ZR19 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZU15 ENTREZGENE, UniProtKB/TrEMBL