PCYOX1L (prenylcysteine oxidase 1 like) - Rat Genome Database

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Gene: PCYOX1L (prenylcysteine oxidase 1 like) Pan paniscus
Analyze
Symbol: PCYOX1L
Name: prenylcysteine oxidase 1 like
RGD ID: 11901153
Description: ENCODES a protein that exhibits oxidoreductase activity (inferred); prenylcysteine oxidase activity (inferred); INVOLVED IN prenylated protein catabolic process (inferred); prenylcysteine catabolic process (inferred); ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); Neurodevelopmental Disorders (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: prenylcysteine oxidase-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24144,588,538 - 144,600,299 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15142,728,121 - 142,739,848 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05144,784,406 - 144,796,053 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15150,794,794 - 150,806,452 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5150,794,794 - 150,806,452 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PCYOX1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24144,588,538 - 144,600,299 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15142,728,121 - 142,739,848 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05144,784,406 - 144,796,053 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15150,794,794 - 150,806,452 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5150,794,794 - 150,806,452 (+)Ensemblpanpan1.1panPan2
PCYOX1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385149,358,046 - 149,369,653 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5149,358,037 - 149,369,653 (+)EnsemblGRCh38hg38GRCh38
GRCh375148,737,609 - 148,749,216 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365148,717,802 - 148,729,408 (+)NCBINCBI36Build 36hg18NCBI36
Celera5144,819,547 - 144,831,198 (+)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5143,883,895 - 143,895,547 (+)NCBIHuRef
CHM1_15148,170,002 - 148,181,654 (+)NCBICHM1_1
T2T-CHM13v2.05149,892,861 - 149,904,468 (+)NCBIT2T-CHM13v2.0
Pcyox1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391861,829,907 - 61,840,712 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1861,829,908 - 61,840,706 (-)EnsemblGRCm39 Ensembl
GRCm381861,696,164 - 61,708,114 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1861,696,837 - 61,707,635 (-)EnsemblGRCm38mm10GRCm38
MGSCv371861,856,491 - 61,867,289 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361861,822,206 - 61,833,004 (-)NCBIMGSCv36mm8
Celera1862,981,373 - 62,993,208 (-)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.68NCBI
Pcyox1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81857,420,971 - 57,431,632 (-)NCBIGRCr8
mRatBN7.21855,150,637 - 55,161,334 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1855,150,650 - 55,161,327 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1857,244,124 - 57,254,806 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01857,958,776 - 57,969,434 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01855,774,498 - 55,785,158 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01857,021,081 - 57,031,552 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1857,021,083 - 57,031,459 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01856,249,994 - 56,259,828 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41857,674,740 - 57,685,074 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1853,300,361 - 53,310,346 (-)NCBICelera
Cytogenetic Map18q12.1NCBI
Pcyox1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554155,052,726 - 5,059,958 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554155,052,782 - 5,059,939 (-)NCBIChiLan1.0ChiLan1.0
PCYOX1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1459,589,846 - 59,600,725 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl459,590,167 - 59,614,584 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha459,354,882 - 59,365,785 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0460,072,414 - 60,083,317 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl460,072,413 - 60,097,107 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1459,859,037 - 59,869,938 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0459,973,448 - 59,984,346 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0460,504,059 - 60,514,962 (-)NCBIUU_Cfam_GSD_1.0
Pcyox1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213143,920,427 - 143,931,265 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365045,492,898 - 5,505,261 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365045,495,095 - 5,505,225 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PCYOX1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2150,526,174 - 150,537,517 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12150,526,002 - 150,539,393 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22157,291,917 - 157,305,294 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PCYOX1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12351,976,981 - 51,988,612 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2351,981,547 - 51,988,598 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603425,758,417 - 25,770,018 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pcyox1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247748,716,770 - 8,728,215 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247748,716,828 - 8,728,012 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008954459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000054041   ⟹   ENSPPAP00000031177
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5150,794,794 - 150,806,452 (+)Ensembl
RefSeq Acc Id: XM_008954459   ⟹   XP_008952707
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24144,588,538 - 144,600,299 (+)NCBI
NHGRI_mPanPan15142,728,121 - 142,739,848 (+)NCBI
Mhudiblu_PPA_v05144,784,406 - 144,796,053 (+)NCBI
PanPan1.15150,794,794 - 150,806,452 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008952707 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000031177.1
Reference Protein Sequences
RefSeq Acc Id: XP_008952707   ⟸   XM_008954459
- UniProtKB: A0A2R9BXE7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000031177   ⟸   ENSPPAT00000054041
Protein Domains
Prenylcysteine lyase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000038525 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000054041.1 UniProtKB/TrEMBL
InterPro Prenylcys_lyase UniProtKB/TrEMBL
  Prenylcysteine_Oxase UniProtKB/TrEMBL
KEGG Report pps:100979787 UniProtKB/TrEMBL
NCBI Gene PCYOX1L ENTREZGENE
PANTHER PRENYLCYSTEINE OXIDASE-LIKE UniProtKB/TrEMBL
  PTHR15944 UniProtKB/TrEMBL
Pfam Prenylcys_lyase UniProtKB/TrEMBL
PIRSF Prenylcysteine_oxidase UniProtKB/TrEMBL
UniProt A0A2R9BXE7 ENTREZGENE, UniProtKB/TrEMBL