PCIF1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 51,676,010 - 51,689,424 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 51,669,169 - 51,682,535 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 42,273,443 - 42,286,885 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 43,360,219 - 43,373,956 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 43,360,219 - 43,374,593 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PCIF1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 45,934,683 - 45,948,020 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 45,934,683 - 45,948,023 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 44,563,322 - 44,576,659 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 43,996,724 - 44,010,069 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 43,996,723 - 44,010,067 | NCBI | | | | | Celera | 20 | 41,274,773 - 41,288,119 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13.12 | NCBI | | | | | HuRef | 20 | 41,304,981 - 41,318,131 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 44,466,000 - 44,479,319 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 47,670,740 - 47,684,073 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pcif1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 164,721,288 - 164,733,360 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 164,721,224 - 164,736,374 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 164,879,368 - 164,891,440 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 164,879,304 - 164,894,454 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 164,704,868 - 164,716,937 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 164,570,573 - 164,582,642 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 170,816,601 - 170,828,684 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | H3 | NCBI | | | | | cM Map | 2 | 85.27 | NCBI | | | | |
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Pcif1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 174,033,471 - 174,046,403 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 153,614,147 - 153,627,079 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 153,614,147 - 153,627,079 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 157,422,576 - 157,435,503 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 165,921,550 - 165,934,477 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 163,665,323 - 163,678,250 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 161,343,883 - 161,356,815 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 161,343,883 - 161,356,815 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 167,528,503 - 167,541,435 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 155,914,227 - 155,927,159 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 155,821,464 - 155,833,176 (+) | NCBI | | | | | Celera | 3 | 152,219,717 - 152,232,649 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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Pcif1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955445 | 11,355,227 - 11,368,392 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955445 | 11,355,227 - 11,368,392 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PCIF1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 33,214,370 - 33,225,922 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 33,214,419 - 33,226,732 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 32,740,403 - 32,752,784 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 33,923,867 - 33,936,241 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 33,924,726 - 33,936,276 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 33,182,148 - 33,194,524 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 33,297,465 - 33,309,839 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 33,836,439 - 33,848,821 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pcif1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 191,636,744 - 191,645,564 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936514 | 7,091,140 - 7,103,124 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936514 | 7,090,367 - 7,103,124 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PCIF1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 48,120,599 - 48,132,620 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 48,120,263 - 48,132,003 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 53,760,285 - 53,771,889 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PCIF1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 17,938,156 - 17,953,289 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 17,938,423 - 17,948,425 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 66,573,899 - 66,586,931 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pcif1 (Heterocephalus glaber - naked mole-rat) |
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