ADGRF5 (adhesion G protein-coupled receptor F5) - Rat Genome Database

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Gene: ADGRF5 (adhesion G protein-coupled receptor F5) Pan paniscus
Analyze
Symbol: ADGRF5
Name: adhesion G protein-coupled receptor F5
RGD ID: 11881641
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); INVOLVED IN energy reserve metabolic process (ortholog); erythrocyte development (ortholog); fat cell differentiation (ortholog); FOUND IN apical part of cell (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: G protein-coupled receptor 116; GPR116
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2561,350,720 - 61,452,916 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1657,216,959 - 57,319,166 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0646,438,128 - 46,540,325 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1647,703,158 - 47,805,347 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl647,700,570 - 47,772,510 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ADGRF5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2561,350,720 - 61,452,916 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1657,216,959 - 57,319,166 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0646,438,128 - 46,540,325 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1647,703,158 - 47,805,347 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl647,700,570 - 47,772,510 (-)Ensemblpanpan1.1panPan2
ADGRF5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38646,852,522 - 46,954,939 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl646,852,522 - 46,954,943 (-)EnsemblGRCh38hg38GRCh38
GRCh37646,820,259 - 46,922,676 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36646,928,201 - 47,030,634 (-)NCBINCBI36Build 36hg18NCBI36
Build 34646,928,297 - 46,990,825NCBI
Celera648,372,598 - 48,475,024 (-)NCBICelera
Cytogenetic Map6p12.3NCBI
HuRef646,543,478 - 46,645,785 (-)NCBIHuRef
CHM1_1646,823,487 - 46,925,912 (-)NCBICHM1_1
T2T-CHM13v2.0646,689,996 - 46,792,404 (-)NCBIT2T-CHM13v2.0
Adgrf5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391743,671,225 - 43,770,448 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1743,671,342 - 43,770,448 (+)EnsemblGRCm39 Ensembl
GRCm381743,360,329 - 43,459,557 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1743,360,451 - 43,459,557 (+)EnsemblGRCm38mm10GRCm38
MGSCv371743,526,415 - 43,596,506 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361742,825,075 - 42,924,198 (+)NCBIMGSCv36mm8
Celera1746,814,258 - 46,884,453 (+)NCBICelera
Cytogenetic Map17B3NCBI
cM Map1719.73NCBI
Adgrf5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8925,014,861 - 25,128,045 (-)NCBIGRCr8
mRatBN7.2917,517,596 - 17,624,107 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl917,520,009 - 17,623,968 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx926,112,113 - 26,215,041 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0931,186,682 - 31,289,610 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0929,475,906 - 29,578,852 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0920,091,121 - 20,195,706 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl920,091,099 - 20,195,566 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0918,967,333 - 19,071,668 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4913,217,956 - 13,323,415 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1913,215,277 - 13,320,737 (-)NCBI
Celera915,237,160 - 15,339,123 (-)NCBICelera
Cytogenetic Map9q13NCBI
Adgrf5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543711,639,891 - 11,688,257 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543711,639,555 - 11,710,362 (-)NCBIChiLan1.0ChiLan1.0
ADGRF5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11215,013,567 - 15,115,889 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1215,006,949 - 15,086,116 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1215,045,001 - 15,147,394 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01215,510,094 - 15,612,365 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1215,512,606 - 15,612,218 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11215,024,852 - 15,127,029 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01215,117,916 - 15,219,946 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01215,263,867 - 15,336,692 (-)NCBIUU_Cfam_GSD_1.0
Adgrf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494650,457,310 - 50,546,121 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647613,414,058 - 13,504,509 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647613,414,087 - 13,503,926 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADGRF5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl741,640,257 - 41,769,232 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1741,640,256 - 41,769,422 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2748,301,437 - 48,429,345 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADGRF5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11725,323,613 - 25,427,370 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1725,356,427 - 25,430,061 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604446,866,043 - 46,976,173 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adgrf5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475413,778,170 - 13,843,723 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475413,778,573 - 13,843,931 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000046132   ⟹   ENSPPAP00000023308
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl647,700,570 - 47,772,510 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000046148   ⟹   ENSPPAP00000023324
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl647,700,570 - 47,772,489 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000046159   ⟹   ENSPPAP00000023335
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl647,704,556 - 47,757,274 (-)Ensembl
RefSeq Acc Id: XM_003833194   ⟹   XP_003833242
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2561,350,720 - 61,420,157 (-)NCBI
NHGRI_mPanPan1657,216,959 - 57,286,376 (-)NCBI
Mhudiblu_PPA_v0646,438,128 - 46,507,538 (-)NCBI
PanPan1.1647,703,158 - 47,772,489 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003833195   ⟹   XP_003833243
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2561,350,720 - 61,452,916 (-)NCBI
NHGRI_mPanPan1657,216,959 - 57,319,166 (-)NCBI
Mhudiblu_PPA_v0646,438,128 - 46,540,325 (-)NCBI
PanPan1.1647,703,158 - 47,805,347 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008958680   ⟹   XP_008956928
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2561,350,720 - 61,420,159 (-)NCBI
NHGRI_mPanPan1657,216,959 - 57,286,378 (-)NCBI
Mhudiblu_PPA_v0646,438,128 - 46,507,540 (-)NCBI
PanPan1.1647,703,158 - 47,772,510 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008958681   ⟹   XP_008956929
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2561,350,720 - 61,452,895 (-)NCBI
NHGRI_mPanPan1657,216,959 - 57,319,144 (-)NCBI
Mhudiblu_PPA_v0646,438,128 - 46,540,300 (-)NCBI
PanPan1.1647,703,158 - 47,805,347 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008958682   ⟹   XP_008956930
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2561,350,720 - 61,420,161 (-)NCBI
NHGRI_mPanPan1657,216,959 - 57,286,379 (-)NCBI
Mhudiblu_PPA_v0646,438,128 - 46,507,542 (-)NCBI
PanPan1.1647,703,158 - 47,772,510 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034962219   ⟹   XP_034818110
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2561,350,720 - 61,420,161 (-)NCBI
NHGRI_mPanPan1657,216,959 - 57,286,380 (-)NCBI
Mhudiblu_PPA_v0646,438,128 - 46,507,542 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_003833243   ⟸   XM_003833195
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_008956929   ⟸   XM_008958681
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008956928   ⟸   XM_008958680
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008956930   ⟸   XM_008958682
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_003833242   ⟸   XM_003833194
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_034818110   ⟸   XM_034962219
- Peptide Label: isoform X3
RefSeq Acc Id: ENSPPAP00000023324   ⟸   ENSPPAT00000046148
RefSeq Acc Id: ENSPPAP00000023335   ⟸   ENSPPAT00000046159
RefSeq Acc Id: ENSPPAP00000023308   ⟸   ENSPPAT00000046132
Protein Domains
G-protein coupled receptors family 2 profile   Ig-like   SEA


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034811 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000046132.1 UniProtKB/TrEMBL
  ENSPPAT00000046148.1 UniProtKB/TrEMBL
  ENSPPAT00000046159.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.220.50 UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/TrEMBL
  3.30.70.960 UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GAIN_dom_N UniProtKB/TrEMBL
  GAIN_dom_sf UniProtKB/TrEMBL
  GPCR_2-like UniProtKB/TrEMBL
  GPCR_2_Ig-hepta-like_rcpt UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  SEA_dom UniProtKB/TrEMBL
  SEA_dom_sf UniProtKB/TrEMBL
KEGG Report pps:100993117 UniProtKB/TrEMBL
NCBI Gene ADGRF5 ENTREZGENE
PANTHER ADHESION G PROTEIN-COUPLED RECEPTOR F5 UniProtKB/TrEMBL
  PTHR45813 UniProtKB/TrEMBL
Pfam 7tm_2 UniProtKB/TrEMBL
  GAIN UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  Ig_3 UniProtKB/TrEMBL
  SEA UniProtKB/TrEMBL
PRINTS GPCRSECRETIN UniProtKB/TrEMBL
  IGHEPTARCPTR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F2_2 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  IG_LIKE UniProtKB/TrEMBL
  SEA UniProtKB/TrEMBL
SMART GPS UniProtKB/TrEMBL
  IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
  SSF48726 UniProtKB/TrEMBL
  SSF82671 UniProtKB/TrEMBL
UniProt A0A2R9B151_PANPA UniProtKB/TrEMBL
  A0A2R9B2W1_PANPA UniProtKB/TrEMBL
  A0A2R9B554_PANPA UniProtKB/TrEMBL