TPRG1 (tumor protein p63 regulated 1) - Rat Genome Database

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Gene: TPRG1 (tumor protein p63 regulated 1) Pan paniscus
Analyze
Symbol: TPRG1
Name: tumor protein p63 regulated 1
RGD ID: 11868205
Description: ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC129397488; LOC129397489; uncharacterized LOC129397488; uncharacterized LOC129397489
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22186,817,441 - 187,200,890 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13187,046,526 - 187,199,885 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03186,124,644 - 186,350,751 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13194,753,299 - 194,904,389 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3194,753,299 - 194,904,389 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TPRG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22186,817,441 - 187,200,890 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13187,046,526 - 187,199,885 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03186,124,644 - 186,350,751 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13194,753,299 - 194,904,389 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3194,753,299 - 194,904,389 (+)Ensemblpanpan1.1panPan2
TPRG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383188,997,227 - 189,325,304 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3188,947,214 - 189,325,304 (+)EnsemblGRCh38hg38GRCh38
GRCh373188,889,760 - 189,043,093 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363190,372,457 - 190,523,964 (+)NCBINCBI36Build 36hg18NCBI36
Celera3187,324,428 - 187,475,904 (+)NCBICelera
Cytogenetic Map3q28NCBI
HuRef3186,294,129 - 186,445,298 (+)NCBIHuRef
CHM1_13188,852,675 - 189,004,217 (+)NCBICHM1_1
T2T-CHM13v2.03191,813,855 - 192,142,070 (+)NCBIT2T-CHM13v2.0
Tprg1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391625,105,567 - 25,242,338 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1625,105,567 - 25,241,094 (+)EnsemblGRCm39 Ensembl
GRCm381625,286,817 - 25,423,588 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1625,286,817 - 25,422,344 (+)EnsemblGRCm38mm10GRCm38
MGSCv371625,286,903 - 25,422,430 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361625,202,166 - 25,337,693 (+)NCBIMGSCv36mm8
Celera1625,836,034 - 25,972,211 (+)NCBICelera
Cytogenetic Map16B1NCBI
cM Map1617.0NCBI
Tprg1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81188,827,231 - 88,954,668 (-)NCBIGRCr8
mRatBN7.21175,322,470 - 75,449,907 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1175,322,470 - 75,449,907 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1184,125,440 - 84,252,943 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01176,760,496 - 76,888,006 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01175,823,410 - 75,950,974 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01178,733,046 - 78,861,745 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1178,728,128 - 78,861,716 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01181,863,279 - 81,991,056 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41177,477,085 - 77,601,486 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11177,534,720 - 77,656,016 (-)NCBI
Celera1174,224,150 - 74,351,014 (-)NCBICelera
Cytogenetic Map11q22-q23NCBI
Tprg1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542018,632,523 - 18,767,636 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542018,632,583 - 18,853,032 (-)NCBIChiLan1.0ChiLan1.0
TPRG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13421,391,903 - 21,528,932 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3421,419,564 - 21,528,718 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3425,486,114 - 25,623,044 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03421,325,186 - 21,462,593 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3421,325,019 - 21,462,593 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13421,341,672 - 21,478,439 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03421,336,224 - 21,472,946 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03421,577,180 - 21,714,080 (+)NCBIUU_Cfam_GSD_1.0
Tprg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602114,880,350 - 115,010,250 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936578972,010 - 1,102,077 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936578972,057 - 1,102,039 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TPRG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13126,724,573 - 126,861,438 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113126,529,961 - 126,860,676 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213135,718,773 - 136,052,723 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TPRG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11583,408,942 - 83,566,246 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1583,455,741 - 83,566,220 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604157,002,079 - 57,150,830 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tprg1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473067,725,466 - 67,841,980 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473067,719,765 - 67,871,369 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000057489   ⟹   ENSPPAP00000034606
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3194,753,299 - 194,904,389 (+)Ensembl
RefSeq Acc Id: XM_063603024   ⟹   XP_063459094
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22186,817,441 - 187,200,890 (+)NCBI
RefSeq Acc Id: XR_010111707
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22186,890,809 - 187,020,252 (+)NCBI
Protein Sequences
Protein RefSeqs XP_063459094 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000034606.1
Reference Protein Sequences
RefSeq Acc Id: ENSPPAP00000034606   ⟸   ENSPPAT00000057489
RefSeq Acc Id: XP_063459094   ⟸   XM_063603024
Protein Domains
hSac2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000040147 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000057489.1 UniProtKB/TrEMBL
InterPro hSac2 UniProtKB/TrEMBL
  Inositol_phosphatase UniProtKB/TrEMBL
  TPRG1-like UniProtKB/TrEMBL
KEGG Report pps:100987722 UniProtKB/TrEMBL
NCBI Gene TPRG1 ENTREZGENE
PANTHER PTHR31108 UniProtKB/TrEMBL
  TUMOR PROTEIN P63-REGULATED GENE 1 PROTEIN UniProtKB/TrEMBL
Pfam hSac2 UniProtKB/TrEMBL
PROSITE HSAC2 UniProtKB/TrEMBL
UniProt A0A2R9BYR2_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-14 TPRG1  tumor protein p63 regulated 1  LOC129397489  uncharacterized LOC129397489  Data Merged 737654 PROVISIONAL
2024-03-14 TPRG1  tumor protein p63 regulated 1  LOC129397488  uncharacterized LOC129397488  Data Merged 737654 PROVISIONAL