LOC100995352 (keratin-associated protein 10-2) - Rat Genome Database

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Gene: LOC100995352 (keratin-associated protein 10-2) Pan paniscus
Analyze
Symbol: LOC100995352
Name: keratin-associated protein 10-2
RGD ID: 11866719
Description: ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); chromosome 16p11.2 deletion syndrome, 593-kb (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ALDOA; aldolase, fructose-bisphosphate A; fructose-bisphosphate aldolase A; uncharacterized protein LOC100995352; uncharaterized LOC112694756 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21830,796,888 - 30,814,367 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11635,411,499 - 35,428,994 (-)NCBINHGRI_mPanPan1
PanPan1.11630,428,190 - 30,444,910 (+)NCBIpanpan1.1PanPan1.1panPan2


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
LOC100995352
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21830,796,888 - 30,814,367 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11635,411,499 - 35,428,994 (-)NCBINHGRI_mPanPan1
PanPan1.11630,428,190 - 30,444,910 (+)NCBIpanpan1.1PanPan1.1panPan2
ALDOA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,053,151 - 30,070,414 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,064,164 - 30,072,207 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,053,090 - 30,070,420 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,064,164 - 30,070,457 (+)EnsemblGRCh38hg38GRCh38
GRCh371630,064,472 - 30,081,735 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361629,971,992 - 29,989,236 (+)NCBINCBI36Build 36hg18NCBI36
Build 341629,983,100 - 29,989,235NCBI
Celera1672,713,985 - 72,731,229 (-)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,725,968 - 27,743,009 (+)NCBIHuRef
CHM1_11631,280,168 - 31,297,498 (+)NCBICHM1_1
T2T-CHM13v2.01630,335,801 - 30,353,059 (+)NCBIT2T-CHM13v2.0
Aldoa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,394,406 - 126,399,537 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,394,406 - 126,399,923 (-)EnsemblGRCm39 Ensembl
GRCm387126,795,234 - 126,800,994 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,795,234 - 126,800,751 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,800,790 - 126,809,108 (-)EnsemblGRCm38mm10GRCm38
MGSCv377133,938,748 - 133,943,961 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367126,586,384 - 126,590,331 (-)NCBIMGSCv36mm8
Celera7126,642,610 - 126,647,822 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.25NCBI
Aldoart2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8678,674,945 - 78,676,635 (+)NCBIGRCr8
mRatBN7.2672,939,821 - 72,941,511 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl672,939,788 - 72,941,709 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx673,361,318 - 73,363,008 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0673,667,686 - 73,669,376 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0673,095,184 - 73,096,873 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0676,349,362 - 76,351,052 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl676,349,362 - 76,351,051 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0685,883,180 - 85,884,870 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4675,812,016 - 75,813,706 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1675,815,141 - 75,816,831 (+)NCBI
Celera671,781,674 - 71,783,364 (+)NCBICelera
Cytogenetic Map6q23NCBI
Aldoa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554936,904,091 - 6,908,959 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554936,904,931 - 6,910,682 (-)NCBIChiLan1.0ChiLan1.0
LOC102157295
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1618,069,839 - 18,077,265 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,648,461 - 19,655,895 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0618,205,816 - 18,213,233 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1618,004,777 - 18,012,193 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,920,174 - 17,927,597 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,234,326 - 18,243,209 (+)NCBIUU_Cfam_GSD_1.0
Aldoa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,320,230 - 124,326,099 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650112,418,090 - 12,422,689 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650112,418,090 - 12,423,959 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103230584
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1526,588,932 - 26,606,722 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl526,588,868 - 26,592,112 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660682,932,348 - 2,947,575 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aldoa
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478213,183,924 - 13,189,286 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034952169   ⟹   XP_034808060
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21830,796,888 - 30,814,367 (+)NCBI
NHGRI_mPanPan11635,411,499 - 35,428,994 (-)NCBI
RefSeq Acc Id: XM_034952170   ⟹   XP_034808061
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21830,796,892 - 30,813,733 (+)NCBI
NHGRI_mPanPan11635,412,133 - 35,428,988 (-)NCBI
RefSeq Acc Id: XM_055099854   ⟹   XP_054955829
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21830,796,892 - 30,813,733 (+)NCBI
NHGRI_mPanPan11635,412,133 - 35,428,988 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034808060 (Get FASTA)   NCBI Sequence Viewer  
  XP_034808061 (Get FASTA)   NCBI Sequence Viewer  
  XP_054955829 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000033616.1
  ENSPPAP00000033630.1
Reference Protein Sequences
RefSeq Acc Id: XP_034808060   ⟸   XM_034952169
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034808061   ⟸   XM_034952170
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054955829   ⟸   XM_055099854
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039660 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000056492.1 UniProtKB/TrEMBL
  ENSPPAT00000056506.1 UniProtKB/TrEMBL
Gene3D-CATH 3.20.20.70 UniProtKB/TrEMBL
InterPro Aldolase_I_AS UniProtKB/TrEMBL
  Aldolase_TIM UniProtKB/TrEMBL
  FBA_I UniProtKB/TrEMBL
NCBI Gene ALDOA ENTREZGENE
PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE A UniProtKB/TrEMBL
  PTHR11627 UniProtKB/TrEMBL
Pfam Glycolytic UniProtKB/TrEMBL
PROSITE ALDOLASE_CLASS_I UniProtKB/TrEMBL
Superfamily-SCOP Aldolase UniProtKB/TrEMBL
UniProt A0A2R9BVY0_PANPA UniProtKB/TrEMBL
  A0A2R9BYR9_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-01 LOC100995352  keratin-associated protein 10-2  ALDOA  aldolase, fructose-bisphosphate A  Symbol and/or name change 5135510 APPROVED