MIGA1 (mitoguardin 1) - Rat Genome Database

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Gene: MIGA1 (mitoguardin 1) Pan paniscus
Analyze
Symbol: MIGA1
Name: mitoguardin 1
RGD ID: 11830191
Description: ENCODES a protein that exhibits protein heterodimerization activity (inferred); protein homodimerization activity (inferred); INVOLVED IN mitochondrial fusion (inferred); FOUND IN membrane (inferred); mitochondrion (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21149,012,726 - 149,109,352 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11148,175,127 - 148,272,111 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0176,999,588 - 77,095,686 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1179,084,279 - 79,178,604 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl179,084,279 - 79,178,604 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MIGA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21149,012,726 - 149,109,352 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11148,175,127 - 148,272,111 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0176,999,588 - 77,095,686 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1179,084,279 - 79,178,604 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl179,084,279 - 79,178,604 (+)Ensemblpanpan1.1panPan2
MIGA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,779,649 - 77,879,540 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,779,624 - 77,879,540 (+)EnsemblGRCh38hg38GRCh38
GRCh37178,245,334 - 78,345,225 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36178,017,897 - 78,116,680 (+)NCBINCBI36Build 36hg18NCBI36
Celera176,484,888 - 76,583,132 (+)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef176,376,932 - 76,476,864 (+)NCBIHuRef
CHM1_1178,361,154 - 78,461,631 (+)NCBICHM1_1
T2T-CHM13v2.0177,618,463 - 77,718,372 (+)NCBIT2T-CHM13v2.0
Miga1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393151,979,096 - 152,046,073 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3151,979,486 - 152,046,044 (-)EnsemblGRCm39 Ensembl
GRCm383152,273,459 - 152,340,436 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3152,273,849 - 152,340,407 (-)EnsemblGRCm38mm10GRCm38
MGSCv373151,936,423 - 152,003,371 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363152,211,235 - 152,277,776 (-)NCBIMGSCv36mm8
Celera3158,751,339 - 158,808,485 (-)NCBICelera
Cytogenetic Map3H3NCBI
cM Map377.1NCBI
Miga1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82243,884,071 - 243,939,059 (-)NCBIGRCr8
mRatBN7.22241,224,118 - 241,279,174 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2241,226,015 - 241,279,106 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.02257,490,729 - 257,546,846 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2257,493,875 - 257,546,799 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02276,167,480 - 276,223,312 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42250,803,495 - 250,852,993 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2233,158,543 - 233,212,583 (-)NCBICelera
Cytogenetic Map2q45NCBI
Miga1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542315,321,627 - 15,388,057 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542315,321,656 - 15,406,359 (-)NCBIChiLan1.0ChiLan1.0
MIGA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1669,019,898 - 69,107,024 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl668,964,187 - 69,107,009 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha671,678,072 - 71,765,154 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0669,606,353 - 69,693,495 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl669,606,354 - 69,693,575 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1669,112,863 - 69,199,692 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0669,057,435 - 69,144,492 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0669,543,012 - 69,630,621 (-)NCBIUU_Cfam_GSD_1.0
Miga1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505889,089,904 - 89,162,670 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365714,600,170 - 4,673,390 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365714,599,938 - 4,673,414 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MIGA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6135,423,423 - 135,512,701 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16135,423,409 - 135,512,567 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26125,603,727 - 125,679,381 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MIGA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12055,299,395 - 55,399,936 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2055,294,436 - 55,399,972 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603362,122,596 - 62,215,630 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Miga1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474219,353,859 - 19,435,604 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474219,353,949 - 19,435,601 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000044615   ⟹   ENSPPAP00000021811
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl179,084,279 - 79,178,604 (+)Ensembl
RefSeq Acc Id: XM_008959922   ⟹   XP_008958170
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,109,349 (-)NCBI
NHGRI_mPanPan11148,175,127 - 148,272,107 (-)NCBI
Mhudiblu_PPA_v0176,999,589 - 77,095,686 (+)NCBI
PanPan1.1179,084,279 - 79,178,604 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008959923   ⟹   XP_008958171
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,109,350 (-)NCBI
NHGRI_mPanPan11148,175,127 - 148,272,107 (-)NCBI
Mhudiblu_PPA_v0176,999,589 - 77,095,686 (+)NCBI
PanPan1.1179,084,297 - 79,174,921 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008959924   ⟹   XP_008958172
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,107,969 (-)NCBI
NHGRI_mPanPan11148,175,127 - 148,270,728 (-)NCBI
Mhudiblu_PPA_v0177,000,444 - 77,095,686 (+)NCBI
PanPan1.1179,084,456 - 79,174,921 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008959925   ⟹   XP_008958173
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,109,350 (-)NCBI
NHGRI_mPanPan11148,175,127 - 148,272,109 (-)NCBI
Mhudiblu_PPA_v0176,999,588 - 77,091,321 (+)NCBI
PanPan1.1179,084,291 - 79,174,921 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034928883   ⟹   XP_034784774
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,107,751 (-)NCBI
NHGRI_mPanPan11148,175,127 - 148,270,509 (-)NCBI
Mhudiblu_PPA_v0177,000,444 - 77,095,686 (+)NCBI
RefSeq Acc Id: XM_055117098   ⟹   XP_054973073
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,109,352 (-)NCBI
NHGRI_mPanPan11148,175,127 - 148,272,111 (-)NCBI
RefSeq Acc Id: XM_063607197   ⟹   XP_063463267
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,107,722 (-)NCBI
RefSeq Acc Id: XM_063607199   ⟹   XP_063463269
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21149,012,726 - 149,107,970 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_008958170   ⟸   XM_008959922
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008958173   ⟸   XM_008959925
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_008958171   ⟸   XM_008959923
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008958172   ⟸   XM_008959924
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_034784774   ⟸   XM_034928883
- Peptide Label: isoform X1
RefSeq Acc Id: ENSPPAP00000021811   ⟸   ENSPPAT00000044615
RefSeq Acc Id: XP_054973073   ⟸   XM_055117098
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063463269   ⟸   XM_063607199
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063463267   ⟸   XM_063607197
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034093 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000044615.1 UniProtKB/TrEMBL
InterPro Miga UniProtKB/TrEMBL
NCBI Gene MIGA1 ENTREZGENE
PANTHER MITOGUARDIN 1 UniProtKB/TrEMBL
  PTHR21508 UniProtKB/TrEMBL
Pfam Miga UniProtKB/TrEMBL
UniProt A0A2R9B0Z4_PANPA UniProtKB/TrEMBL