ITPRIP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 8 | 116,198,401 - 116,215,237 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 116,203,730 - 116,232,717 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 100,911,715 - 100,938,543 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 104,368,059 - 104,397,193 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 104,372,767 - 104,374,410 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ITPRIP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 10 | 104,309,700 - 104,338,465 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 104,309,698 - 104,338,465 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 106,069,458 - 106,098,223 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 106,061,889 - 106,083,653 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 106,061,890 - 106,083,653 | NCBI | | | | | Celera | 10 | 99,812,709 - 99,834,473 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | q25.1 | NCBI | | | | | HuRef | 10 | 99,701,183 - 99,729,977 (-) | NCBI | | HuRef | | | CHM1_1 | 10 | 106,353,303 - 106,382,108 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 105,197,853 - 105,226,599 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Itprip (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 19 | 47,883,029 - 47,907,738 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 47,883,041 - 47,907,738 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 47,894,590 - 47,919,323 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 47,894,602 - 47,919,299 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 47,969,086 - 47,993,789 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 47,947,911 - 47,972,592 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 48,655,105 - 48,680,223 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | D1 | NCBI | | | | | cM Map | 19 | 40.49 | NCBI | | | | |
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Itprip (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 256,704,087 - 256,727,661 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 246,762,804 - 246,786,379 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 246,762,472 - 246,786,408 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 254,890,123 - 254,913,689 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 261,583,120 - 261,606,701 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 254,232,976 - 254,256,534 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 267,649,385 - 267,673,341 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 | 1 | 271,252,447 - 271,272,169 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 267,651,320 - 267,653,389 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 271,252,447 - 271,275,989 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 275,081,233 - 275,105,151 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 1 | 242,526,571 - 242,546,524 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q54 | NCBI | | | | |
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Itprip (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955485 | 6,336,790 - 6,359,049 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955485 | 6,335,670 - 6,360,757 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ITPRIP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 28 | 16,613,934 - 16,638,058 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 16,777,662 - 16,810,220 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 17,083,435 - 17,115,964 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 28 | 16,630,989 - 16,663,461 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 16,659,631 - 16,692,168 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 16,798,322 - 16,830,859 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Itprip (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 30,271,144 - 30,294,808 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936600 | 1,895,714 - 1,897,384 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936600 | 1,874,696 - 1,898,033 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ITPRIP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 115,252,791 - 115,277,654 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 115,243,035 - 115,278,137 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 125,221,987 - 125,246,701 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ITPRIP (Chlorocebus sabaeus - green monkey) |
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Itprip (Heterocephalus glaber - naked mole-rat) |
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