BRICD5 (BRICHOS domain containing 5) - Rat Genome Database

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Gene: BRICD5 (BRICHOS domain containing 5) Pan paniscus
Analyze
Symbol: BRICD5
Name: BRICHOS domain containing 5
RGD ID: 11699107
Description: INVOLVED IN regulation of cell population proliferation (inferred); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); endometrial carcinoma (ortholog); FOUND IN extracellular space (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: BRICHOS domain-containing protein 5; BRICHOS domain-containing protein C16orf79-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2182,712,154 - 2,714,336 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1166,493,122 - 6,495,662 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,067,543 - 1,069,836 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1162,310,660 - 2,312,995 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl162,310,660 - 2,312,995 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
BRICD5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2182,712,154 - 2,714,336 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1166,493,122 - 6,495,662 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,067,543 - 1,069,836 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1162,310,660 - 2,312,995 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl162,310,660 - 2,312,995 (-)Ensemblpanpan1.1panPan2
BRICD5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,209,253 - 2,210,863 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,209,253 - 2,210,905 (-)EnsemblGRCh38hg38GRCh38
GRCh37162,259,254 - 2,260,864 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36162,199,255 - 2,201,012 (-)NCBINCBI36Build 36hg18NCBI36
Celera162,473,671 - 2,475,428 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef162,185,432 - 2,187,247 (-)NCBIHuRef
CHM1_1162,259,180 - 2,260,995 (-)NCBICHM1_1
T2T-CHM13v2.0162,231,710 - 2,233,320 (-)NCBIT2T-CHM13v2.0
Bricd5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391724,692,858 - 24,694,443 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1724,692,858 - 24,694,443 (+)EnsemblGRCm39 Ensembl
GRCm381724,473,487 - 24,475,471 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1724,473,884 - 24,475,469 (+)EnsemblGRCm38mm10GRCm38
MGSCv371724,610,829 - 24,612,414 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361724,201,484 - 24,203,069 (+)NCBIMGSCv36mm8
Celera1724,989,660 - 24,991,245 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.39NCBI
Bricd5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,003,276 - 14,004,809 (+)NCBIGRCr8
mRatBN7.21013,498,726 - 13,500,259 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,498,381 - 13,500,259 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1018,245,294 - 18,246,827 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,734,139 - 17,735,672 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,233,324 - 13,234,857 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,839,599 - 13,841,132 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,839,956 - 13,841,018 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01013,656,585 - 13,658,118 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,725,912 - 13,727,392 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1013,179,206 - 13,180,739 (+)NCBICelera
Cytogenetic Map10q12NCBI
Bricd5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,055,513 - 15,060,526 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544215,054,116 - 15,056,506 (+)NCBIChiLan1.0ChiLan1.0
BRICD5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,760,164 - 38,761,718 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,758,254 - 38,761,735 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha639,998,655 - 40,001,015 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0639,067,850 - 39,070,210 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl639,068,650 - 39,070,105 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,752,860 - 38,755,220 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,725,186 - 38,727,546 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,203,907 - 39,206,267 (+)NCBIUU_Cfam_GSD_1.0
Bricd5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,870,513 - 104,872,046 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366941,837,357 - 1,838,819 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366941,836,566 - 1,838,950 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BRICD5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,780,940 - 39,782,466 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1339,780,707 - 39,782,478 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2342,398,543 - 42,400,868 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BRICD5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.152,105,125 - 2,107,353 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl52,105,235 - 2,106,695 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606828,952,865 - 28,956,678 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bricd5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462491348,343 - 50,669 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462491348,445 - 50,752 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000002083   ⟹   ENSPPAP00000000465
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl162,310,660 - 2,312,995 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000002116   ⟹   ENSPPAP00000000476
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl162,310,748 - 2,312,995 (-)Ensembl
RefSeq Acc Id: XM_003806218   ⟹   XP_003806266
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2182,712,154 - 2,714,336 (-)NCBI
NHGRI_mPanPan1166,493,122 - 6,495,662 (-)NCBI
Mhudiblu_PPA_v0161,067,543 - 1,069,836 (-)NCBI
PanPan1.1162,310,660 - 2,312,995 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008951344   ⟹   XP_008949592
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2182,712,154 - 2,714,336 (-)NCBI
NHGRI_mPanPan1166,493,167 - 6,495,412 (-)NCBI
Mhudiblu_PPA_v0161,067,543 - 1,069,836 (-)NCBI
PanPan1.1162,310,748 - 2,312,995 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003806266 (Get FASTA)   NCBI Sequence Viewer  
  XP_008949592 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000000465.1
  ENSPPAP00000000476.1
Reference Protein Sequences
RefSeq Acc Id: XP_003806266   ⟸   XM_003806218
- Peptide Label: isoform X2
- UniProtKB: A0A2R8ZAG6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008949592   ⟸   XM_008951344
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZCZ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSPPAP00000000465   ⟸   ENSPPAT00000002083
RefSeq Acc Id: ENSPPAP00000000476   ⟸   ENSPPAT00000002116
Protein Domains
BRICHOS


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000001919 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000002083.1 UniProtKB/TrEMBL
  ENSPPAT00000002116.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.390.150 UniProtKB/TrEMBL
InterPro BRICHOS_dom UniProtKB/TrEMBL
KEGG Report pps:100976826 UniProtKB/TrEMBL
NCBI Gene BRICD5 ENTREZGENE
PANTHER BRICHOS DOMAIN-CONTAINING PROTEIN 5 UniProtKB/TrEMBL
  GASTROKINE 1 UniProtKB/TrEMBL
Pfam BRICHOS UniProtKB/TrEMBL
PROSITE BRICHOS UniProtKB/TrEMBL
SMART BRICHOS UniProtKB/TrEMBL
UniProt A0A2R8ZAG6 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8ZCZ0 ENTREZGENE, UniProtKB/TrEMBL