RN7SKP206 (RN7SK pseudogene 206) - Rat Genome Database

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Gene: RN7SKP206 (RN7SK pseudogene 206) Homo sapiens
Analyze
Symbol: RN7SKP206
Name: RN7SK pseudogene 206
RGD ID: 10399305
HGNC Page HGNC:45930
Description:
Type: pseudo (Ensembl: misc_RNA)
RefSeq Status: INFERRED
Previously known as: RNA, 7SK small nuclear pseudogene 206
Related Functional Gene: RN7SK  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388129,290,983 - 129,291,275 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8129,290,983 - 129,291,275 (+)EnsemblGRCh38hg38GRCh38
GRCh378130,303,229 - 130,303,521 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8q24.21NCBI
CHM1_18130,343,496 - 130,343,788 (+)NCBICHM1_1
T2T-CHM13v2.08130,416,878 - 130,417,170 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:84
Count of miRNA genes:82
Interacting mature miRNAs:84
Transcripts:ENST00000410823
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system adipose tissue appendage
High
Medium
Low 28 1 1 1 1
Below cutoff 10 3 9 4 28 4 14 3 5 2 10 9 3 4

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000410823
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl8129,290,983 - 129,291,275 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RN7SKP206 COSMIC
Ensembl Genes ENSG00000222755 Ensembl, ENTREZGENE
GTEx ENSG00000222755 GTEx
HGNC ID HGNC:45930 ENTREZGENE
Human Proteome Map RN7SKP206 Human Proteome Map
NCBI Gene RN7SKP206 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-02 RN7SKP206  RN7SK pseudogene 206    RNA, 7SK small nuclear pseudogene 206  Symbol and/or name change 5135510 APPROVED