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GENE - TERM ANNOTATION REPORT

6 Annotations Found.

An association has been curated linking Notch1 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
    		•  
  • The annotation was made from Patten BA, etal., J Neurosci 2003 Jul 9;23(14):6132-40.
  • 6 additional annotations were made from Patten BA, etal., J Neurosci 2003 Jul 9;23(14):6132-40.
  • 1309 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 67 papers in RGD have been used to annotate Notch1


    • An association has been curated linking Notch1 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with NOTCH1 (Homo sapiens)
  • 1309 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 67 papers in RGD have been used to annotate Notch1
  • Qualifier: involved_in
  • Curation Notes: (PMID:18239137), (PMID:20616313), (PMID:23839946)
  • Original References(s): PMID:18239137 PMID:20616313 PMID:23839946


    • An association has been curated linking Notch1 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from genetic interaction (IGI)
    		•  
  • The annotation was made from Acharya A, etal., PLoS One. 2011;6(11):e27743. doi: 10.1371/journal.pone.0027743. Epub 2011 Nov 16.
  • The annotation has been inferred from genetic interaction with UniProtKB:F1LYL9
  • 1 additional annotations were made from Acharya A, etal., PLoS One. 2011;6(11):e27743. doi: 10.1371/journal.pone.0027743. Epub 2011 Nov 16.
  • 1309 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 67 papers in RGD have been used to annotate Notch1
  • Qualifier: involved_in
  • Curation Notes: PMID:22110751


    • An association has been curated linking Notch1 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Notch1 (Mus musculus)
  • 1309 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 67 papers in RGD have been used to annotate Notch1
  • Qualifier: involved_in
  • Curation Notes: (MGI:3027664|PMID:14701881), (MGI:3040159|PMID:15107403), (MGI:3604167|PMID:16025100), (MGI:3701380|PMID:17336907), (MGI:3783952|PMID:17303760), (MGI:4947514|PMID:20007915), (MGI:5298073|PMID:21311046), (MGI:5320279|PMID:19245366), (MGI:6158746|PMID:22110751)
  • Original References(s): MGI:3027664 MGI:3040159 MGI:3604167 MGI:3701380 MGI:3783952 MGI:4947514 MGI:5298073 MGI:5320279 MGI:6158746 PMID:14701881 PMID:15107403 PMID:16025100 PMID:17303760 PMID:17336907 PMID:19245366 PMID:20007915 PMID:21311046 PMID:22110751


    • An association has been curated linking Notch1 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with FB:FBgn0004647 & PANTHER:PTN001169994 & Notch1 (Rattus norvegicus)
  • 1309 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 67 papers in RGD have been used to annotate Notch1
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


    • An association has been curated linking Notch1 and positive regulation of transcription by RNA polymerase II in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Notch1 (Mus musculus)
  • 1309 RGD objects have been annotated to positive regulation of transcription by RNA polymerase II  (GO:0045944)
  • 67 papers in RGD have been used to annotate Notch1
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: MGI:1330810 (PMID:12783854), (PMID:15902259), (PMID:16145673), (PMID:16618808), (PMID:17658278)
  • Original References(s): PMID:12783854 PMID:15902259 PMID:16145673 PMID:16618808 PMID:17658278


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