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Gene-Chemical Interaction Annotations
Gene-Chemical Interaction AnnotationsTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | (+)-catechin | increases expression | EXP | | 6480464 | Catechin results in increased expression of NOTCH1 mRNA | CTD | PMID:15465739 | 17alpha-ethynylestradiol | multiple interactions | ISO | RGD:10998 | 6480464 | [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of NOTCH1 mRNA | CTD | PMID:17942748 | 17alpha-ethynylestradiol | decreases expression | ISO | RGD:3187 | 6480464 | Ethinyl Estradiol results in decreased expression of NOTCH1 mRNA | CTD | PMID:17557909 | 17beta-estradiol | multiple interactions | EXP | | 6480464 | Estradiol promotes the reaction [NOTCH1 protein binds to CCND1 promoter] | CTD | PMID:19838210 | 17beta-estradiol | affects expression | ISO | RGD:10998 | 6480464 | Estradiol affects the expression of NOTCH1 mRNA | CTD | PMID:15598610 | 2,2',4,4',5,5'-hexachlorobiphenyl | increases expression | ISO | RGD:3187 | 6480464 | 2,4,5,2',4',5'-hexachlorobiphenyl results in increased expression of NOTCH1 protein | CTD | PMID:21908764 | 2,3,7,8-tetrachlorodibenzodioxine | decreases expression | EXP | | 6480464 | Tetrachlorodibenzodioxin results in decreased expression of NOTCH1 mRNA | CTD | PMID:19684285 | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin affects the expression of NOTCH1 mRNA | CTD | PMID:18343893 PMID:21570461 | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:15328365 more ... | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:15800033 more ... | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:10886394 more ... | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:16611356 more ... | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:15328365 more ... | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:15800033 more ... | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:15800033 more ... | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:19684285 more ... | 2,3,7,8-tetrachlorodibenzodioxine | decreases expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin results in decreased expression of NOTCH1 mRNA | CTD | PMID:17586704 | 2,3,7,8-tetrachlorodibenzodioxine | multiple interactions | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin inhibits the reaction [EGF protein results in increased expression of NOTCH1 mRNA] | CTD | PMID:15667827 | 2,3,7,8-tetrachlorodibenzodioxine | multiple interactions | ISO | RGD:10998 | 6480464 | [Tetrachlorodibenzodioxin binds to AHR protein] which results in increased expression of NOTCH1 mRNA | CTD | PMID:16214954 | 2,3,7,8-tetrachlorodibenzodioxine | multiple interactions | ISO | RGD:10998 | 6480464 | [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of NOTCH1 mRNA | CTD | PMID:17942748 | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | ISO | RGD:10998 | 6480464 | Tetrachlorodibenzodioxin affects the expression of NOTCH1 mRNA | CTD | PMID:18343893 | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | EXP | | 6480464 | Tetrachlorodibenzodioxin results in increased expression of NOTCH1 mRNA | CTD | PMID:19684285 | 2-acetamidofluorene | increases expression | ISO | RGD:10998 | 6480464 | 2-Acetylaminofluorene results in increased expression of NOTCH1 mRNA | CTD | PMID:21607683 | 3,3',4,4',5-pentachlorobiphenyl | increases expression | ISO | RGD:10998 | 6480464 | 3,4,5,3',4'-pentachlorobiphenyl results in increased expression of NOTCH1 mRNA | CTD | PMID:18042819 PMID:20702594 | 3,3',4,4',5-pentachlorobiphenyl | increases expression | ISO | RGD:10998 | 6480464 | 3,4,5,3',4'-pentachlorobiphenyl results in increased expression of NOTCH1 mRNA | CTD | PMID:20702594 PMID:18042819 | 4-hydroxynon-2-enal | decreases expression | ISO | RGD:10998 | 6480464 | 4-hydroxy-2-nonenal results in decreased expression of NOTCH1 mRNA | CTD | PMID:19191707 | 5-aza-2'-deoxycytidine | multiple interactions | EXP | | 6480464 | [decitabine co-treated with trichostatin A] results in decreased expression of NOTCH1 mRNA | CTD | PMID:17185465 | aflatoxin B1 | increases expression | ISO | RGD:10998 | 6480464 | Aflatoxin B1 results in increased expression of NOTCH1 mRNA | CTD | PMID:19770486 | all-trans-retinoic acid | decreases expression | EXP | | 6480464 | Tretinoin results in decreased expression of NOTCH1 mRNA | CTD | PMID:21934132 | all-trans-retinoic acid | multiple interactions | EXP | | 6480464 | [Tretinoin co-treated with Phenylbutyrates co-treated with 1-hydroxy-2-oxo-3,3-bis(2-aminoethyl)-1-triazene] results in increased expression of NOTCH1 protein | CTD | PMID:23284745 | ammonium chloride | affects expression | ISO | RGD:3187 | 6480464 | Ammonium Chloride affects the expression of NOTCH1 mRNA | CTD | PMID:16483693 | arsenite(3-) | multiple interactions | EXP | | 6480464 | tyrphostin AG 1478 inhibits the reaction [arsenite results in decreased expression of NOTCH1 protein modified form] | CTD | PMID:18633435 | arsenite(3-) | increases expression | EXP | | 6480464 | arsenite results in increased expression of NOTCH1 protein | CTD | PMID:22011395 | arsenite(3-) | decreases expression | EXP | | 6480464 | arsenite results in decreased expression of NOTCH1 protein modified form | CTD | PMID:18633435 | baicalein | increases activity | EXP | | 6480464 | baicalein results in increased activity of NOTCH1 protein | CTD | PMID:19160421 | baicalein | increases expression | EXP | | 6480464 | baicalein results in increased expression of NOTCH1 mRNA | CTD | PMID:19160421 | baicalin | increases activity | EXP | | 6480464 | baicalin results in increased activity of NOTCH1 protein | CTD | PMID:19160421 | baicalin | increases expression | EXP | | 6480464 | baicalin results in increased expression of NOTCH1 mRNA | CTD | PMID:19160421 | benzo[a]pyrene | increases expression | ISO | RGD:10998 | 6480464 | Benzo(a)pyrene results in increased expression of NOTCH1 mRNA | CTD | PMID:19770486 | benzo[a]pyrene | increases expression | ISO | RGD:10998 | 6480464 | Benzo(a)pyrene results in increased expression of NOTCH1 mRNA | CTD | PMID:19770486 PMID:22228805 | bisphenol A | decreases expression | ISO | RGD:10998 | 6480464 | bisphenol A results in decreased expression of NOTCH1 mRNA | CTD | PMID:21932408 | cadmium dichloride | increases methylation | ISO | RGD:3187 | 6480464 | Cadmium Chloride results in increased methylation of NOTCH1 promoter | CTD | PMID:22457795 | calciol | increases expression | ISO | RGD:10998 | 6480464 | Cholecalciferol results in increased expression of NOTCH1 mRNA | CTD | PMID:17170073 | chlorpyrifos | decreases expression | ISO | RGD:3187 | 6480464 | Chlorpyrifos results in decreased expression of NOTCH1 mRNA | CTD | PMID:18668222 | chromium(6+) | multiple interactions | ISO | RGD:10998 | 6480464 | MAP2K7 protein promotes the reaction [chromium hexavalent ion results in increased expression of NOTCH1 mRNA] | CTD | PMID:19654923 | chromium(6+) | increases expression | ISO | RGD:10998 | 6480464 | chromium hexavalent ion results in increased expression of NOTCH1 mRNA | CTD | PMID:19654923 | curcumin | decreases expression | EXP | | 6480464 | Curcumin results in decreased expression of NOTCH1 protein | CTD | PMID:18640131 | curcumin | multiple interactions | EXP | | 6480464 | [Curcumin co-treated with Isoflavones] results in decreased expression of NOTCH1 protein | CTD | PMID:18640131 | curcumin | decreases expression | EXP | | 6480464 | Curcumin results in decreased expression of NOTCH1 mRNA | CTD | PMID:17927689 | DDT | increases activity | EXP | | 6480464 | DDT results in increased activity of NOTCH1 protein | CTD | PMID:18791200 | DDT | multiple interactions | EXP | | 6480464 | MAP2K6 protein promotes the reaction [DDT results in increased activity of NOTCH1 protein] | CTD | PMID:18791200 | dexamethasone | decreases expression | ISO | RGD:3187 | 6480464 | Dexamethasone results in decreased expression of NOTCH1 mRNA | CTD | PMID:14618091 | dexamethasone | multiple interactions | ISO | RGD:3187 | 6480464 | Dexamethasone inhibits the reaction [Lipopolysaccharides results in increased expression of NOTCH1 mRNA] | CTD | PMID:18449946 | diarsenic trioxide | decreases expression | EXP | | 6480464 | arsenic trioxide results in decreased expression of NOTCH1 mRNA; more ... | CTD | PMID:22978106 | diethylstilbestrol | decreases expression | ISO | RGD:10998 | 6480464 | Diethylstilbestrol results in decreased expression of NOTCH1 mRNA | CTD | PMID:21041162 | dimethylarsinic acid | affects expression | ISO | RGD:3187 | 6480464 | Cacodylic Acid affects the expression of NOTCH1 mRNA | CTD | PMID:17720352 | fluoxetine | increases expression | ISO | RGD:3187 | 6480464 | Fluoxetine results in increased expression of NOTCH1 protein; more ... | CTD | PMID:19801843 | LY294002 | multiple interactions | ISO | RGD:10998 | 6480464 | 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one inhibits the reaction [Zinc affects the localization of NOTCH1 protein]; more ... | CTD | PMID:17513037 | methylmercury chloride | affects expression | ISO | RGD:3187 | 6480464 | methylmercuric chloride affects the expression of NOTCH1 mRNA | CTD | PMID:20864626 | N-nitrosodiethylamine | increases expression | ISO | RGD:10998 | 6480464 | Diethylnitrosamine results in increased expression of NOTCH1 mRNA | CTD | PMID:17854601 | N-nitrosodiethylamine | increases expression | ISO | RGD:10998 | 6480464 | Diethylnitrosamine results in increased expression of NOTCH1 mRNA | CTD | PMID:17854601 PMID:21607683 | N-nitrosodiethylamine | multiple interactions | ISO | RGD:10998 | 6480464 | RB1 protein inhibits the reaction [Diethylnitrosamine results in increased expression of NOTCH1 mRNA] | CTD | PMID:17854601 | nicotinic acid | increases expression | ISO | RGD:3187 | 6480464 | Niacin results in increased expression of NOTCH1 protein | CTD | PMID:19223914 | oxaliplatin | affects response to substance | EXP | | 6480464 | NOTCH1 protein affects the susceptibility to oxaliplatin | CTD | PMID:19147571 | oxaliplatin | increases expression | EXP | | 6480464 | oxaliplatin results in increased expression of NOTCH1 protein modified form | CTD | PMID:19147571 | oxaliplatin | multiple interactions | EXP | | 6480464 | Sulfonamides inhibits the reaction [oxaliplatin results in increased expression of NOTCH1 protein modified form] | CTD | PMID:19147571 | paracetamol | increases expression | EXP | | 6480464 | Acetaminophen results in increased expression of NOTCH1 mRNA | CTD | PMID:22230336 | phenethyl isothiocyanate | multiple interactions | EXP | | 6480464 | N-(N-(3,5-difluorophenacetyl)alanyl)phenylglycine tert-butyl ester inhibits the reaction [phenethyl isothiocyanate results in increased cleavage of and results in increased activity of NOTCH1 protein] | CTD | PMID:22039516 | phenethyl isothiocyanate | increases expression | EXP | | 6480464 | phenethyl isothiocyanate results in increased expression of NOTCH1 mRNA | CTD | PMID:22039516 | pirinixic acid | increases expression | ISO | RGD:10998 | 6480464 | pirinixic acid results in increased expression of NOTCH1 mRNA | CTD | PMID:18301758 | propiconazole | decreases expression | ISO | RGD:10998 | 6480464 | propiconazole results in decreased expression of NOTCH1 mRNA | CTD | PMID:21278054 | resveratrol | multiple interactions | EXP | | 6480464 | MRK 003 inhibits the reaction [resveratrol results in increased activity of NOTCH1] | CTD | PMID:21743969 | resveratrol | decreases expression | EXP | | 6480464 | resveratrol results in decreased expression of NOTCH1 protein | CTD | PMID:17868649 | resveratrol | increases activity | EXP | | 6480464 | resveratrol results in increased activity of NOTCH1 | CTD | PMID:21743969 | retinyl acetate | increases expression | ISO | RGD:10998 | 6480464 | retinol acetate results in increased expression of NOTCH1 mRNA | CTD | PMID:16772331 | simvastatin | increases cleavage | ISO | RGD:3187 | 6480464 | Simvastatin results in increased cleavage of NOTCH1 protein | CTD | PMID:19109527 | simvastatin | increases expression | ISO | RGD:3187 | 6480464 | Simvastatin results in increased expression of NOTCH1 mRNA | CTD | PMID:19109527 | sulforaphane | multiple interactions | EXP | | 6480464 | sulforafan inhibits the reaction [gemcitabine results in increased expression of NOTCH1 protein] | CTD | PMID:20940707 | tamoxifen | decreases expression | ISO | RGD:3187 | 6480464 | Tamoxifen results in decreased expression of NOTCH1 protein | CTD | PMID:17343880 | tamoxifen | multiple interactions | ISO | RGD:3187 | 6480464 | [Tamoxifen results in increased expression of MIR34A mRNA] which results in decreased expression of NOTCH1 protein | CTD | PMID:17343880 | trans-resveratrol | multiple interactions | EXP | | 6480464 | MRK 003 inhibits the reaction [resveratrol results in increased activity of NOTCH1] | CTD | PMID:21743969 | trans-resveratrol | decreases expression | EXP | | 6480464 | resveratrol results in decreased expression of NOTCH1 protein | CTD | PMID:17868649 | trans-resveratrol | increases activity | EXP | | 6480464 | resveratrol results in increased activity of NOTCH1 | CTD | PMID:21743969 | trichostatin A | multiple interactions | EXP | | 6480464 | [decitabine co-treated with trichostatin A] results in decreased expression of NOTCH1 mRNA | CTD | PMID:17185465 | triphenylstannane | decreases expression | EXP | | 6480464 | triphenyltin results in decreased expression of NOTCH1 mRNA | CTD | PMID:12788061 | wortmannin | multiple interactions | ISO | RGD:10998 | 6480464 | wortmannin inhibits the reaction [Zinc results in decreased activity of NOTCH1 protein]; more ... | CTD | PMID:17513037 | zalcitabine | increases mutagenesis | ISO | RGD:10998 | 6480464 | Zalcitabine results in increased mutagenesis of NOTCH1 gene | CTD | PMID:18798262 | zinc atom | multiple interactions | ISO | RGD:10998 | 6480464 | 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one inhibits the reaction [Zinc affects the localization of NOTCH1 protein]; more ... | CTD | PMID:17513037 | zinc atom | affects localization | ISO | RGD:10998 | 6480464 | Zinc affects the localization of NOTCH1 protein | CTD | PMID:17513037 | zinc atom | decreases activity | ISO | RGD:10998 | 6480464 | Zinc results in decreased activity of NOTCH1 protein | CTD | PMID:17513037 | zinc(0) | multiple interactions | ISO | RGD:10998 | 6480464 | 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one inhibits the reaction [Zinc affects the localization of NOTCH1 protein]; more ... | CTD | PMID:17513037 | zinc(0) | decreases activity | ISO | RGD:10998 | 6480464 | Zinc results in decreased activity of NOTCH1 protein | CTD | PMID:17513037 | zinc(0) | affects localization | ISO | RGD:10998 | 6480464 | Zinc affects the localization of NOTCH1 protein | CTD | PMID:17513037 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology Annotations
Molecular Pathway Annotations| External Database Links | |
| KEGG Pathway | Dorso-ventral axis formation |
| Notch signaling pathway | |
| Prion diseases | |
| Pathway Interaction Database | Notch signaling pathway (PID:200015) |
| Notch-mediated HES/HEY network (PID:200228) | |
| Presenilin action in Notch and Wnt signaling (PID:200063) | |
| Validated transcriptional targets of deltaNp63 isoforms (PID:200186) | |
Disease Annotations
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Gene-Chemical Interaction Annotations
Gene Ontology Annotations
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Molecular Pathway Annotations
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| External Database Links | |
| KEGG Pathway | Dorso-ventral axis formation |
| Notch signaling pathway | |
| Prion diseases | |
| Pathway Interaction Database | Notch signaling pathway (PID:200015) |
| Notch-mediated HES/HEY network (PID:200228) | |
| Presenilin action in Notch and Wnt signaling (PID:200063) | |
| Validated transcriptional targets of deltaNp63 isoforms (PID:200186) | |
References - curated| 1. |
De La O JP, etal., Proc Natl Acad Sci U S A. 2008 Dec 2;105(48):18907-12. Epub 2008 Nov 21. |
| 2. |
Fiuza UM and Arias AM, J Endocrinol. 2007 Sep;194(3):459-74. |
| 3. |
Garg V, etal., Nature. 2005 Sep 8;437(7056):270-4. Epub 2005 Jul 17. |
| 4. |
GOA_HUMAN data from the GO Consortium |
| 5. |
Hanlon L, etal., Cancer Res. 2010 May 18. |
| 6. |
Ishimura N, etal., Gastroenterology. 2005 May;128(5):1354-68. |
| 7. |
Kimura K, etal., Cancer Sci. 2007 Feb;98(2):155-62. |
| 8. |
Kohler C, etal., Hepatology 2004 Apr;39(4):1056-65. |
| 9. |
Kubu CJ, etal., Dev Biol 2002 Apr 1;244(1):199-214. |
| 10. |
Lin JT, etal., Adv Ther. 2003 Nov-Dec;20(6):337-43. |
| 11. |
Malecki MJ, etal., Mol Cell Biol. 2006 Jun;26(12):4642-51. |
| 12. |
Patten BA, etal., J Neurosci 2003 Jul 9;23(14):6132-40. |
| 13. |
Pipeline to import KEGG annotations from KEGG into RGD Pathway Ontology |
| 14. |
Pipeline to import Pathway Interaction Database annotations from NCI into RGD |
| 15. |
RGD automated import pipeline for gene-chemical interactions |
| 16. |
RGD Automated Pipelines |
| 17. |
Suzuki T, etal., Int J Oncol. 2000 Dec;17(6):1131-9. |
| 18. |
Sweeney C, etal., FASEB J. 2004 Sep;18(12):1421-3. Epub 2004 Jul 9. |
| 19. |
Tryndyak VP, etal., Mol Carcinog. 2009 Jun;48(6):479-87. |
| 20. |
Weng AP, etal., Science 2004 Oct 8;306(5694):269-71. |
| 21. |
Zhu F, etal., Am J Pathol. 2010 Feb;176(2):650-9. Epub 2010 Jan 7. |
| 22. |
Zhu YM, etal., Clin Cancer Res. 2006 May 15;12(10):3043-9. |
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RGD Disease Portals| NOTCH1 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| NOTCH1 (Homo sapiens) |
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| Notch1 (Mus musculus) |
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| Notch1 (Rattus norvegicus) |
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Position Markers| RH80945 |
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| PMC122602P2 |
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| PMC140667P1 |
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| PMC85812P1 |
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| NOTCH1_950 |
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| STS-M73980 |
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| D19S235E |
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QTLs in Region (Human Genome Assembly GRCh37)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| Nucleotide RefSeqs | NG_007458 | (Get FASTA) | Search GEO for Microarray Profiles |
| NM_017617 | (Get FASTA) | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AB209873 | (Get FASTA) | Search GEO for Microarray Profiles |
| ABBA01022709 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01022710 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01022711 | (Get FASTA) | Search GEO for Microarray Profiles | |
| ABBA01022712 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AF308602 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AK000012 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AL354671 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AL592301 | (Get FASTA) | Search GEO for Microarray Profiles | |
| AMYH01021865 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC013208 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC039147 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC046127 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC049843 | (Get FASTA) | Search GEO for Microarray Profiles | |
| BC063597 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CH471090 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CN431067 | (Get FASTA) | Search GEO for Microarray Profiles | |
| CR457221 | (Get FASTA) | Search GEO for Microarray Profiles | |
| DA324222 | (Get FASTA) | Search GEO for Microarray Profiles | |
| HI574318 | (Get FASTA) | Search GEO for Microarray Profiles | |
| M73980 | (Get FASTA) | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | NM_017617 | |||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | |||||||||||||||||||||||||
| Type: | CODING | |||||||||||||||||||||||||
| Protein Acc Id: | NP_060087 | |||||||||||||||||||||||||
| Peptide Label: | preproprotein | |||||||||||||||||||||||||
| Position: |
|
Protein Sequences| Protein RefSeqs | NP_060087 | (Get FASTA) |
| GenBank Protein | AAA60614 | (Get FASTA) |
| AAG33848 | (Get FASTA) | |
| BAA90883 | (Get FASTA) | |
| BAD93110 | (Get FASTA) | |
| CAG33502 | (Get FASTA) | |
| CBX47648 | (Get FASTA) | |
| EAW88241 | (Get FASTA) | |
| P46531 | (Get FASTA) |
Promoters| RGD ID: | 6807926 | ||||||||||
| Promoter ID: | HG_KWN:65605 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | HeLa_S3, Lymphoblastoid | ||||||||||
| Transcripts: | OTTHUMT00000055088 | ||||||||||
| Position: |
|
| RGD ID: | 6807927 | ||||||||||
| Promoter ID: | HG_KWN:65606 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | CD4+TCell, HeLa_S3, K562, Lymphoblastoid | ||||||||||
| Transcripts: | UC004CIA.1 | ||||||||||
| Position: |
|
| RGD ID: | 6807925 | ||||||||||
| Promoter ID: | HG_KWN:65607 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | Lymphoblastoid | ||||||||||
| Transcripts: | OTTHUMT00000055089 | ||||||||||
| Position: |
|
| RGD ID: | 6814816 | ||||||||||
| Promoter ID: | HG_XEF:8483 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | CD4+TCell, Lymphoblastoid | ||||||||||
| Transcripts: | NM_001087605, NM_001097288 | ||||||||||
| Position: |
|
| RGD ID: | 6808157 | ||||||||||
| Promoter ID: | HG_KWN:65609 | ||||||||||
| Type: | CpG-Island | ||||||||||
| SO ACC ID: | SO:0000170 | ||||||||||
| Source: | MPROMDB | ||||||||||
| Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4 | ||||||||||
| Transcripts: | ENST00000277541, ENST00000371700, OTTHUMT00000055084 | ||||||||||
| Position: |
|
External Database Links| Database | Acc Id | Source(s) |
| COSMIC | NOTCH1 | COSMIC |
| Ensembl Genes | ENSG00000148400 | ENTREZGENE |
| Ensembl Protein | ENSP00000277541 | ENTREZGENE |
| Ensembl Transcript | ENST00000277541 | ENTREZGENE |
| Entrez Gene | 4851 | ENTREZGENE |
| Gene3D-CATH | ANK | UniProtKB/Swiss-Prot |
| Germonline | ENSG00000148400 | |
| HGNC ID | 7881 | ENTREZGENE |
| HomoloGene Group ID | 32049 | ENTREZGENE |
| HPRD ID | 01827 | ENTREZGENE |
| InterPro | Ankyrin_rpt | UniProtKB/Swiss-Prot |
| Ankyrin_rpt-contain_dom | UniProtKB/Swiss-Prot | |
| DUF3454_notch | UniProtKB/Swiss-Prot | |
| EGF-like_Ca-bd | UniProtKB/Swiss-Prot | |
| EGF-like_reg_CS | UniProtKB/Swiss-Prot | |
| EGF-type_Asp/Asn_hydroxyl_site | UniProtKB/Swiss-Prot | |
| EGF_3 | UniProtKB/Swiss-Prot | |
| EGF_Ca-bd_CS | UniProtKB/Swiss-Prot | |
| Notch | UniProtKB/Swiss-Prot | |
| Notch_1 | UniProtKB/Swiss-Prot | |
| Notch_dom | UniProtKB/Swiss-Prot | |
| Notch_NOD_dom | UniProtKB/Swiss-Prot | |
| Notch_NODP_dom | UniProtKB/Swiss-Prot | |
| IPI | IPI00386123 | UniProtKB/TrEMBL |
| IPI00412982 | UniProtKB/Swiss-Prot | |
| KEGG Report | hsa:4851 | ENTREZGENE, UniProtKB/Swiss-Prot |
| OMIM | 109730 | OMIM |
| 190198 | OMIM | |
| Pfam | Ank | UniProtKB/Swiss-Prot |
| Ank_2 | UniProtKB/Swiss-Prot | |
| DUF3454 | UniProtKB/Swiss-Prot | |
| EGF | UniProtKB/Swiss-Prot | |
| EGF_CA | UniProtKB/Swiss-Prot | |
| hEGF | UniProtKB/Swiss-Prot | |
| NOD | UniProtKB/Swiss-Prot | |
| NODP | UniProtKB/Swiss-Prot | |
| Notch | UniProtKB/Swiss-Prot | |
| PharmGKB | PA31683 | PharmGKB |
| PIRSF | Notch | UniProtKB/Swiss-Prot |
| PRINTS | LNOTCHREPEAT | UniProtKB/Swiss-Prot |
| NOTCH1 | UniProtKB/Swiss-Prot | |
| PROSITE | ANK_REP_REGION | UniProtKB/Swiss-Prot |
| ANK_REPEAT | UniProtKB/Swiss-Prot | |
| ASX_HYDROXYL | UniProtKB/Swiss-Prot | |
| EGF_1 | UniProtKB/Swiss-Prot | |
| EGF_2 | UniProtKB/Swiss-Prot | |
| EGF_3 | UniProtKB/Swiss-Prot | |
| EGF_CA | UniProtKB/Swiss-Prot | |
| LNR | UniProtKB/Swiss-Prot | |
| SMART | ANK | UniProtKB/Swiss-Prot |
| EGF | UniProtKB/Swiss-Prot | |
| EGF_CA | UniProtKB/Swiss-Prot | |
| SM00004 | UniProtKB/Swiss-Prot | |
| Superfamily-SCOP | ANK | UniProtKB/Swiss-Prot |
| Notch_region | UniProtKB/Swiss-Prot | |
| UniGene | Hs.495473 | ENTREZGENE |
| UniProt | NOTC1_HUMAN | UniProtKB/Swiss-Prot |
| Q9NXX4_HUMAN | UniProtKB/TrEMBL |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2011-08-16 | NOTCH1 | notch 1 | NOTCH1 | notch 1 | Symbol and/or name change | 39860 | APPROVED |
| 2011-07-27 | NOTCH1 | notch 1 | NOTCH1 | Notch homolog 1, translocation-associated (Drosophila) | Symbol and/or name change | 39860 | APPROVED |
| More on NOTCH1 | |||
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Entrez Gene | ||
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Ensembl Gene | ||
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HGNC Report | ||
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NCBI Map Viewer | ||
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Vista | ||
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Vista + UCSC | ||
| RGD Object Information | |
| RGD ID: | 737367 |
| Created: | 2004-02-06 |
| Species: | Homo sapiens |
| Last Modified: | 2013-04-30 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




