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GENE - TERM ANNOTATION REPORT

8 Annotations Found.

An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with PRKN (Homo sapiens)
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: located_in
  • Curation Notes: (PMID:19029340), (PMID:19229105), (PMID:19880420), (PMID:20889974), (PMID:21508222), (PMID:21753002), (PMID:23933751), (PMID:24751536)
  • Original References(s): PMID:19029340 PMID:19229105 PMID:19880420 PMID:20889974 PMID:21508222 PMID:21753002 PMID:23933751 PMID:24751536


    • An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with PRKN (Homo sapiens) & UniProtKB:O60260-1 & UniProtKB:O60260-2 & UniProtKB:O60260-6
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: located_in
  • Original References(s): GO_REF:0000052


    • An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Lee JY, etal., J Cell Biol. 2010 May 17;189(4):671-9. doi: 10.1083/jcb.201001039. Epub 2010 May 10.
  • 5 additional annotations were made from Lee JY, etal., J Cell Biol. 2010 May 17;189(4):671-9. doi: 10.1083/jcb.201001039. Epub 2010 May 10.
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: located_in
  • Curation Notes: PMID:20457763


    • An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB-SubCell:SL-0091
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000044
  • Original References(s): GO_REF:0000044


    • An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with InterPro:IPR003977
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000002
  • Original References(s): GO_REF:0000002


    • An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from sequence or structural similarity with UniProtKB:O60260
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000024
  • Original References(s): GO_REF:0000024


    • An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with PANTHER:PTN002269238 & Prkn (Rattus norvegicus) & UniProtKB:O60260
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: is_active_in
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


    • An association has been curated linking Prkn and cytosol in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with PANTHER:PTHR10677:SF40
  • 4577 RGD objects have been annotated to cytosol  (GO:0005829)
  • 67 papers in RGD have been used to annotate Prkn
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000118
  • Original References(s): GO_REF:0000118


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