Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

2 Annotations Found.

An association has been curated linking Pla2g6 and neurodegeneration with brain iron accumulation 2A in Ictidomys tridecemlineatus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from OMIM Disease Annotation Pipeline
  • The annotation has been inferred from sequence orthology with PLA2G6 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 53 RGD objects have been annotated to neurodegeneration with brain iron accumulation 2A  (DOID:0110735)
  • 0 papers in RGD have been used to annotate Pla2g6


    • An association has been curated linking Pla2g6 and neurodegeneration with brain iron accumulation 2A in Ictidomys tridecemlineatus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with PLA2G6 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 53 RGD objects have been annotated to neurodegeneration with brain iron accumulation 2A  (DOID:0110735)
  • 0 papers in RGD have been used to annotate Pla2g6
  • Curation Notes: ClinVar Annotator: match by term: Infantile neuroaxonal dystrophy | ClinVar Annotator: match by term: Infantile neuroaxonal dystrophy 1 | ClinVar Annotator: match by term: PLA2G6-associated neurodegeneration | ClinVar Annotator: match by term: Seitelberger disease
  • Original References(s): PMID:16199547 PMID:16783378 PMID:17033970 PMID:17576681 PMID:18359254 PMID:18414213 PMID:18443314 PMID:18570303 PMID:18799783 PMID:18981035 PMID:19087156 PMID:19138334 PMID:19893029 PMID:20186954 PMID:20226704 PMID:20301718 PMID:20584031 PMID:20619503 PMID:20669327 PMID:20886109 PMID:20938027 PMID:20947703 PMID:21368765 PMID:21520282 PMID:21700586 PMID:21812034 PMID:22213678 PMID:22442204 PMID:22934738 PMID:23182313 PMID:23685560 PMID:23749988 PMID:24033266 PMID:24088041 PMID:24108619 PMID:24130795 PMID:24252552 PMID:24628589 PMID:24745848 PMID:24800972 PMID:24870368 PMID:25164370 PMID:25174650 PMID:25294124 PMID:25326635 PMID:25326637 PMID:25348461 PMID:25601130 PMID:25634434 PMID:25640679 PMID:25660576 PMID:25741868 PMID:25741915 PMID:25741916 PMID:26001724 PMID:26196026 PMID:26467025 PMID:26539891 PMID:26633542 PMID:26633545 PMID:26668131 PMID:2668131 PMID:26755131 PMID:26829737 PMID:27081553 PMID:27127721 PMID:27146152 PMID:27196560 PMID:27268037 PMID:27294386 PMID:27378808 PMID:27395053 PMID:27516098 PMID:27709683 PMID:27848944 PMID:27882168 PMID:27942883 PMID:28150298 PMID:28295203 PMID:28492532 PMID:28549837 PMID:28600779 PMID:28714225 PMID:28716262 PMID:28821231 PMID:29108286 PMID:29124790 PMID:29159939 PMID:29395073 PMID:29454663 PMID:29472584 PMID:29859652 PMID:29913018 PMID:29915382 PMID:30042723 PMID:30065071 PMID:30112060 PMID:30120687 PMID:30169597 PMID:30232368 PMID:30302010 PMID:30340910 PMID:30537300 PMID:30619057 PMID:30772976 PMID:31069529 PMID:31104286 PMID:31493945 PMID:31496990 PMID:31506141 PMID:31516627 PMID:31548400 PMID:31689548 PMID:32005694 PMID:32183746 PMID:32357911 PMID:32404165 PMID:32613234 PMID:32707456 PMID:32771225 PMID:32860008 PMID:33050356 PMID:33098801 PMID:33279242 PMID:33361639 PMID:33547378 PMID:33550528 PMID:33619735 PMID:34168672 PMID:34272103 PMID:34307755 PMID:34445196 PMID:34520727 PMID:34602496 PMID:34622992 PMID:35032046 PMID:35041927 PMID:35122944 PMID:35247231 PMID:35624904 PMID:35861376 PMID:35911906 PMID:36499697 PMID:36790591 PMID:9536098


    • Go Back to source page   Continue to Ontology report