Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

2 Annotations Found.

An association has been curated linking Scn8a and epilepsy in Chinchilla lanigera.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SCN8A (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2603 RGD objects have been annotated to epilepsy  (DOID:1826)
  • 2 papers in RGD have been used to annotate Scn8a
  • Curation Notes: ClinVar Annotator: match by term: Epilepsy | ClinVar Annotator: match by term: Seizure
  • Original References(s): PMID:18414213 PMID:24888894 PMID:25741868 PMID:26677014 PMID:26993267 PMID:27210545 PMID:27864847 PMID:27875746 PMID:28492532 PMID:28923014 PMID:29432985 PMID:30171078 PMID:30185235 PMID:30615093 PMID:31402610 PMID:31625145 PMID:32581362 PMID:34431999


    • An association has been curated linking Scn8a and epilepsy in Chinchilla lanigera.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SCN8A (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2603 RGD objects have been annotated to epilepsy  (DOID:1826)
  • 2 papers in RGD have been used to annotate Scn8a
  • Curation Notes: ClinVar Annotator: match by term: Epilepsy | ClinVar Annotator: match by term: Seizures
  • Original References(s): PMID:25741868 PMID:26677014 PMID:26993267 PMID:27864847 PMID:28492532 PMID:28923014 PMID:29432985 PMID:30171078 PMID:30615093 PMID:31625145


    • Go Back to source page   Continue to Ontology report