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ONTOLOGY REPORT - ANNOTATIONS

Term:P granule
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Accession:GO:0043186 term browser browse the term
Definition:A small cytoplasmic, non-membranous RNA/protein complex aggregate in the primordial germ cells of many higher eukaryotes.
Synonyms:exact_synonym: germline granule
 narrow_synonym: nuage;   polar granule
 alt_id: GO:0018994


show annotations for term's descendants           Sort by:
P granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Ago2 argonaute RISC catalytic component 2 IDA MMO:0000663 RGD PMID:27029769 RGD:11529670 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Carhsp1 calcium regulated heat stable protein 1 located_in ISS
ISO		 GO_REF:0000024
(MGI:5320273|PMID:21078874)		 UniProt
RGD		 PMID:21078874 GO_REF:0000024 MGI:5320273 NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019 		JBrowse link
G Ddx3 DEAD-box helicase 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:98,520,538...98,523,707
Ensembl chr13:98,520,201...98,524,176 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168 		JBrowse link
G Ddx3y DEAD box helicase 3, Y-linked is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:1,115,095...1,135,754
Ensembl chr  Y:1,116,309...1,135,706 		JBrowse link
G Ddx4 DEAD-box helicase 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723 		JBrowse link
G Helz helicase with zinc finger is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:92,479,403...92,645,234
Ensembl chr10:92,501,518...92,638,383 		JBrowse link
G Henmt1 HEN methyltransferase 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:196,585,732...196,603,700
Ensembl chr 2:196,586,797...196,599,738 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:16787967), (PMID:18694567)		 GO_Central
RGD		 PMID:16787967 PMID:18694567 GO_REF:0000033 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657 		JBrowse link
G Mov10 Mov10 RNA helicase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083 		JBrowse link
G Mov10l1 Mov10 like RNA helicase 1 located_in
is_active_in		 ISO
IBA		 (MGI:4457283|PMID:20534472)
GO_REF:0000033		 RGD
GO_Central		 PMID:20534472 GO_REF:0000033 MGI:4457283 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765 		JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in
is_active_in		 ISO
IBA		 (MGI:3815367|PMID:18922463), (MGI:4443217|PMID:20439430)
GO_REF:0000033		 RGD
GO_Central		 PMID:18922463 PMID:20439430 GO_REF:0000033 MGI:3815367 MGI:4443217 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in
is_active_in		 ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:3815367|PMID:18922463)		 UniProt
GO_Central
RGD		 PMID:18922463 GO_REF:0000024 GO_REF:0000033 MGI:3815367 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826 		JBrowse link
G Snrpgl1 small nuclear ribonucleoprotein polypeptide G like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118
Ensembl chr 4:87,982,626...87,983,118 		JBrowse link
G Stk31 serine threonine kinase 31 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:78,370,691...78,467,599
Ensembl chr 4:78,370,649...78,466,240 		JBrowse link
G Tdrd1 tudor domain containing 1 located_in
is_active_in		 ISO
IBA		 (MGI:3691397|PMID:17038506), (MGI:4356231|PMID:19465913), (MGI:4443217|PMID:20439430)
GO_REF:0000033		 RGD
GO_Central		 PMID:17038506 PMID:19465913 PMID:20439430 GO_REF:0000033 MGI:3691397 MGI:4356231 MGI:4443217 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871 		JBrowse link
G Tdrd5 tudor domain containing 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319 		JBrowse link
G Tdrd6 tudor domain containing 6 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:16093322), (PMID:17141210)		 GO_Central
RGD		 PMID:16093322 PMID:17141210 GO_REF:0000033 NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344 		JBrowse link
G Tdrd7 tudor domain containing 7 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:17141210)		 GO_Central
RGD		 PMID:17141210 GO_REF:0000033 NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544 		JBrowse link
G Tdrkh tudor and KH domain containing is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755 		JBrowse link
pi-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 IDA MMO:0000663 RGD PMID:27029769 RGD:11529670 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Ankrd34c ankyrin repeat domain 34C is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:90,271,264...90,281,759
Ensembl chr 8:90,269,315...90,281,775 		JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 located_in
is_active_in		 ISO
IBA		 (MGI:4356194|PMID:19730684)
GO_REF:0000033		 RGD
GO_Central		 PMID:19730684 GO_REF:0000033 MGI:4356194 NCBI chr 4:46,400,485...46,456,085
Ensembl chr 4:46,400,485...46,456,085 		JBrowse link
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO		 GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4443217|PMID:20439430), (PMID:22792342)		 UniProt
RGD		 PMID:20011505 PMID:20439430 PMID:22792342 GO_REF:0000024 MGI:4417983 MGI:4443217 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723 		JBrowse link
G Mov10l1 Mov10 like RNA helicase 1 located_in ISO (MGI:5470328|PMID:23166510) RGD PMID:23166510 MGI:5470328 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in ISO (MGI:4356194|PMID:19730684), (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948) RGD PMID:19730684 PMID:20011505 PMID:20059948 MGI:4356194 MGI:4417983 MGI:4418580 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Tdrd1 tudor domain containing 1 located_in ISO (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948), (MGI:4820495|PMID:19861488) RGD PMID:19861488 PMID:20011505 PMID:20059948 MGI:4417983 MGI:4418580 MGI:4820495 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871 		JBrowse link
G Tdrd5 tudor domain containing 5 located_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:4946318|PMID:21383078)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319 		JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755 		JBrowse link
piP-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO		 GO_REF:0000024
(MGI:4417983|PMID:20011505)		 UniProt
RGD		 PMID:20011505 GO_REF:0000024 MGI:4417983 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in ISO (MGI:4417983|PMID:20011505) RGD PMID:20011505 MGI:4417983 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657 		JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in ISS
ISO		 GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)		 UniProt
RGD		 PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761 		JBrowse link
G Tdrd9 tudor domain containing 9 located_in ISS
ISO		 GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)		 UniProt
RGD		 PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 6:131,029,644...131,145,076
Ensembl chr 6:131,029,652...131,144,651 		JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20629
    cellular anatomical entity 20391
      cytoplasm 11695
        cytoplasmic ribonucleoprotein granule 255
          P granule 26
            pi-body 9
            piP-body 5
Path 2
Term Annotations click to browse term
  cellular_component 20629
    cellular anatomical entity 20391
      intracellular anatomical structure 15013
        intracellular organelle 13394
          intracellular non-membrane-bounded organelle 5217
            ribonucleoprotein granule 274
              cytoplasmic ribonucleoprotein granule 255
                P granule 26
                  pi-body 9
                  piP-body 5
paths to the root