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ONTOLOGY REPORT - ANNOTATIONS

Term:rRNA base methylation
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Accession:GO:0070475 term browser browse the term
Definition:The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.


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rRNA base methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emg1 EMG1 N1-specific pseudouridine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540 		JBrowse link
G Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:51,111,831...51,118,253
Ensembl chr 8:51,113,397...51,118,308 		JBrowse link
G Mettl15 methyltransferase 15, mitochondrial 12S rRNA N4-cytidine involved_in ISO
IBA		 (PMID:31665743), (PMID:32371392)
GO_REF:0000033		 RGD
GO_Central		 PMID:31665743 PMID:32371392 GO_REF:0000033 NCBI chr 3:95,586,855...95,764,392
Ensembl chr 3:95,586,850...95,764,397 		JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G Nop2 NOP2 nucleolar protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459 		JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO
IBA		 (PMID:31428936), (PMID:31722427)
(MGI:6414744|PMID:31722427)
GO_REF:0000033		 RGD
GO_Central		 PMID:31428936 PMID:31722427 GO_REF:0000033 MGI:6414744 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272 		JBrowse link
rRNA (guanine-N7)-methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor involved_in ISO
IBA		 (PMID:25851604)
GO_REF:0000033		 RGD
GO_Central		 PMID:25851604 GO_REF:0000033 NCBI chr12:21,629,551...21,640,758
Ensembl chr12:21,629,536...21,640,751 		JBrowse link
G Trmt112 tRNA methyltransferase activator subunit 11-2 involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 1:204,103,298...204,104,151 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11455
      methylation 176
        macromolecule methylation 74
          RNA methylation 67
            rRNA methylation 20
              rRNA base methylation 8
                rRNA (guanine-N7)-methylation 2
Path 2
Term Annotations click to browse term
  biological_process 19692
    cellular process 18168
      cellular metabolic process 9554
        cellular biosynthetic process 7752
          macromolecule biosynthetic process 7210
            nucleic acid biosynthetic process 4203
              RNA biosynthetic process 4090
                RNA processing 954
                  rRNA processing 234
                    rRNA modification 28
                      rRNA methylation 20
                        rRNA base methylation 8
                          rRNA (guanine-N7)-methylation 2
paths to the root