Welcome
{{ username}}
Message Center
{{ messageCount }} Messages
Go to Message Center
Watched Genes
{{$index + 1}}.
{{ watchedObject.symbol }} (RGD ID:{{watchedObject.rgdId}})
Modify Subscription
Unsubscribe
Watched Ontology Terms
{{$index + 1}}.
{{ watchedTerm.term }} ({{watchedTerm.accId}})
Modify Subscription
Unsubscribe
{{gene.symbol}}:
{{ gene.description }}
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
{{ loginError }}
{{ watchLinkText }}
Select categories you would like to watch. Updates to this gene will be sent to {{ username }}
{{geneWatchAttr}}
Analyze
Gene
Strain
QTL
List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailble
Variant Visualizer (Genomic Variants)
unavailable
Gene Annotator (Functional Annotation)
Gene Annotator (Annotation Distribution)
Variant Visualizer (Genomic Variants)
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants) unavailble
Variant Visualizer (Damaging Variants)
unavailable
InterViewer (Protein-Protein Interactions)
GViewer (Genome Viewer)
Variant Visualizer (Damaging Variants)
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Gene Annotator (Annotation Comparison)
OLGA (Gene List Generator)
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
MOET (Multi-Ontology Enrichement)
GOLF (Gene-Ortholog Location Finder)
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
new
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
ONTOLOGY REPORT - ANNOTATIONS
{{ watchLinkText }}
Term:
axial mesoderm morphogenesis
go back to main search page
Accession:
GO:0048319
browse the term
Definition:
The process in which the anatomical structures of the axial mesoderm are generated and organized.
show annotations for term's descendants Sort by:
symbol
object name
position
reference
evidence
↑ asc
↓ desc
Rat (5)
Mouse (5)
Human (5)
Chinchilla (5)
Bonobo (5)
Dog (5)
Squirrel (5)
Pig (5)
Green Monkey (5)
Naked Mole-rat (5)
All
Genes (5)
axial mesoderm morphogenesis
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Epb41l5
erythrocyte membrane protein band 4.1 like 5
acts_upstream_of_or_within
ISO
MGI:3578147 (PMID:17507402)
RGD
PMID:17507402
NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
G
Tcf7l1
transcription factor 7 like 1
acts_upstream_of_or_within
ISO
MGI:3044616 (PMID:14668413)
RGD
PMID:14668413
NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287
axial mesoderm formation
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Axin1
axin 1
involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857546 (PMID:9230313)
Ensembl
RGD
PMID:9230313
GO_REF:0000107
NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615
G
Epha2
Eph receptor A2
acts_upstream_of_or_within
ISO
MGI:2448472 (PMID:11287184)
RGD
PMID:11287184
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
axial mesodermal cell fate specification
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
(PMID:14511481)
RGD
PMID:14511481
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
Term paths to the root
one shortest
all shortest
one longest
all longest
one shortest and longest
all
Path 1
Term
Annotations
biological_process
19692
developmental process
6963
anatomical structure morphogenesis
2956
tissue morphogenesis
715
mesoderm morphogenesis
85
axial mesoderm morphogenesis
5
axial mesoderm formation
+
3
axial mesoderm structural organization
0
Path 2
Term
Annotations
biological_process
19692
developmental process
6963
anatomical structure development
6486
tissue development
2289
mesoderm development
133
axial mesoderm development
11
axial mesoderm morphogenesis
5
axial mesoderm formation
+
3
axial mesoderm structural organization
0