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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine nucleoside monophosphate catabolic process
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Accession:GO:0009131 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.
Synonyms:exact_synonym: pyrimidine nucleoside monophosphate breakdown;   pyrimidine nucleoside monophosphate catabolism;   pyrimidine nucleoside monophosphate degradation


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CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231 		JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA involved_in ISO (PMID:22925580) RGD PMID:22925580 NCBI chr 4:86,161,642...86,204,656
Ensembl chr 4:86,161,643...86,204,628 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (PMID:5472365) RGD PMID:5472365 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (PMID:14715930) RGD PMID:14715930 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (PMID:14715930) RGD PMID:14715930 NCBI chr 3:43,273,048...43,317,417
Ensembl chr 3:43,273,048...43,317,417 		JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:6301357) RGD PMID:6301357 NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (PMID:5472365) RGD PMID:5472365 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (PMID:7744869) RGD PMID:7744869 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (PMID:12849978) RGD PMID:12849978 NCBI chr 3:43,273,048...43,317,417
Ensembl chr 3:43,273,048...43,317,417 		JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:6301357) RGD PMID:6301357 NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954 		JBrowse link
G Tymp thymidine phosphorylase involved_in ISO MGI:2183547 (PMID:12077348) RGD PMID:12077348 NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874
Ensembl chr 7:120,438,770...120,443,874 		JBrowse link
G Upp1 uridine phosphorylase 1 NOT|involved_in ISO MGI:3699164 (MGI:3584214|PMID:15772079)
MGI:3699164 (PMID:12077348)		 RGD PMID:12077348 PMID:15772079 MGI:3584214 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:10681516) RGD PMID:10681516 NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954 		JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial acts_upstream_of_or_within ISO (PMID:12234672) RGD PMID:12234672 NCBI chr10:44,652,845...44,680,549
Ensembl chr10:44,652,975...44,679,150 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (PMID:5472365) RGD PMID:5472365 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (PMID:14154460) RGD PMID:14154460 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
UMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:5472365)		 Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:10681516) RGD PMID:10681516 NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (PMID:5472365) RGD PMID:5472365 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (PMID:14715930), (PMID:7744869) RGD PMID:7744869 PMID:14715930 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (PMID:14715930) RGD PMID:14715930 NCBI chr 3:43,273,048...43,317,417
Ensembl chr 3:43,273,048...43,317,417 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      catabolic process 2751
        organic substance catabolic process 2307
          organophosphate catabolic process 282
            nucleoside phosphate catabolic process 222
              nucleoside monophosphate catabolic process 23
                pyrimidine nucleoside monophosphate catabolic process 9
                  pyrimidine deoxyribonucleoside monophosphate catabolic process + 8
                  pyrimidine ribonucleoside monophosphate catabolic process + 7
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      organic substance metabolic process 10970
        organic cyclic compound metabolic process 6031
          nucleobase-containing compound metabolic process 5524
            nucleobase-containing small molecule metabolic process 688
              nucleoside phosphate metabolic process 616
                nucleoside monophosphate metabolic process 86
                  nucleoside monophosphate catabolic process 23
                    pyrimidine nucleoside monophosphate catabolic process 9
                      pyrimidine deoxyribonucleoside monophosphate catabolic process + 8
                      pyrimidine ribonucleoside monophosphate catabolic process + 7
paths to the root