Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear localization sequence binding
go back to main search page
Accession:GO:0008139 term browser browse the term
Definition:Binding to a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus.
Synonyms:exact_synonym: NLS binding;   nuclear localisation sequence binding;   nuclear localization signal binding


show annotations for term's descendants           Sort by:
nuclear localization sequence binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brap BRCA1 associated protein enables ISO (PMID:9497340) RGD PMID:9497340 NCBI chr12:34,874,533...34,901,030
Ensembl chr12:34,874,533...34,901,030 		JBrowse link
G Cabp1 calcium binding protein 1 enables IDA PMID:18303947 UniProt PMID:18303947 RGD:8553324 NCBI chr12:41,385,234...41,448,930
Ensembl chr12:41,378,897...41,448,927 		JBrowse link
G Ipo4 importin 4 enables ISO
IBA		 (PMID:17682055)
GO_REF:0000033		 RGD
GO_Central		 PMID:17682055 GO_REF:0000033 NCBI chr15:29,117,365...29,127,382
Ensembl chr15:29,117,365...29,127,285 		JBrowse link
G Ipo5 importin 5 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:97,990,755...98,041,074
Ensembl chr15:98,005,299...98,041,126 		JBrowse link
G Kpna1 karyopherin subunit alpha 1 enables IDA
IBA		 PMID:18303947
GO_REF:0000033		 GO_Central PMID:18303947 GO_REF:0000033, RGD:8553324 NCBI chr11:64,715,844...64,774,647
Ensembl chr11:64,717,563...64,774,623 		JBrowse link
G Kpna2 karyopherin subunit alpha 2 enables IBA
ISO		 GO_REF:0000033
(PMID:17324944), (PMID:28991411)		 GO_Central
RGD		 PMID:17324944 PMID:28991411 GO_REF:0000033 NCBI chr10:91,933,951...91,946,115
Ensembl chr10:91,933,951...91,946,150 		JBrowse link
G Kpna3 karyopherin subunit alpha 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:35,536,310...35,610,066
Ensembl chr15:35,536,316...35,610,419 		JBrowse link
G Kpna4 karyopherin subunit alpha 4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:153,319,380...153,381,085
Ensembl chr 2:153,324,273...153,381,081 		JBrowse link
G Kpna5 karyopherin subunit alpha 5 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:30,822,925...30,888,080
Ensembl chr20:30,822,935...30,888,078 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:141,988,111...142,021,483
Ensembl chr 5:141,991,568...142,021,120 		JBrowse link
G Kpna7 karyopherin subunit alpha 7 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:9,576,378...9,635,247
Ensembl chr12:9,576,378...9,612,833 		JBrowse link
G Kpnb1 karyopherin subunit beta 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:82,145,662...82,174,437
Ensembl chr10:82,145,420...82,174,605 		JBrowse link
G Lbr lamin B receptor IPI RGD PMID:8486604 RGD:9588618 NCBI chr13:93,539,386...93,564,026
Ensembl chr13:93,538,920...93,564,017 		JBrowse link
G Nfkbia NFKB inhibitor alpha enables ISO UniProtKB:Q04206 (PMID:1493333) RGD PMID:1493333 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941 		JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 IDA RGD PMID:1623516 RGD:633419 NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088 		JBrowse link
G Nup153 nucleoporin 153 enables IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7878057 GO_REF:0000033, RGD:729014 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Nup214 nucleoporin 214 IDA RGD PMID:7878057 RGD:729014 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
G Nup58 nucleoporin 58 enables IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:8707840 GO_REF:0000002 GO_REF:0000033, RGD:633404 NCBI chr15:34,358,170...34,407,160
Ensembl chr15:34,358,277...34,407,060 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor enables IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7878057 GO_REF:0000033, RGD:729014 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Pom121 POM121 transmembrane nucleoporin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294 		JBrowse link
G Ranbp6 RAN binding protein 6 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:227,572,394...227,576,915
Ensembl chr 1:227,572,105...227,576,942 		JBrowse link
G Tnpo1 transportin 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:30,207,529...30,300,162
Ensembl chr 2:30,211,510...30,300,375 		JBrowse link
G Tnpo2 transportin 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:23,099,398...23,119,696
Ensembl chr19:23,099,401...23,119,596 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20483
    binding 17534
      peptide binding 262
        signal sequence binding 44
          nuclear localization sequence binding 23
paths to the root