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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA-templated transcriptional start site selection
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Accession:GO:0001173 term browser browse the term
Definition:Any process involved in the selection of the specific location within the template strand of a DNA-dependent RNA polymerase promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.
Synonyms:exact_synonym: DNA-dependent transcriptional start site selection
 narrow_synonym: transcriptional start site selection at bacterial-type RNA polymerase promoter
 alt_id: GO:0001176


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regulation of transcriptional start site selection at RNA polymerase II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pwwp2a PWWP domain containing 2A involved_in ISO (MGI:6867108|PMID:33235983) RGD PMID:33235983 MGI:6867108 NCBI chr10:28,155,509...28,195,255
Ensembl chr10:28,155,605...28,194,308 		JBrowse link
transcriptional start site selection at RNA polymerase II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2b general transcription factor IIB involved_in IEA
ISO
ISS
IBA		 GO_REF:0000107
(PMID:10318856)
GO_REF:0000024
GO_REF:0000033		 Ensembl
RGD
UniProt
GO_Central		 PMID:10318856 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      primary metabolic process 10015
        nucleobase-containing compound metabolic process 5524
          nucleic acid metabolic process 4949
            RNA metabolic process 4367
              RNA biosynthetic process 4090
                DNA-templated transcriptional start site selection 2
                  transcriptional start site selection at RNA polymerase II promoter + 2
                  transcriptional start site selection at RNA polymerase III promoter 0
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      organic substance metabolic process 10970
        organic cyclic compound metabolic process 6031
          nucleobase-containing compound metabolic process 5524
            nucleic acid metabolic process 4949
              RNA metabolic process 4367
                RNA biosynthetic process 4090
                  DNA-templated transcription 3282
                    DNA-templated transcription initiation 182
                      DNA-templated transcriptional start site selection 2
                        transcriptional start site selection at RNA polymerase II promoter + 2
                        transcriptional start site selection at RNA polymerase III promoter 0
paths to the root