RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: pontocerebellar hypoplasia type 1B
Accession: DOID:0060266
browse the term
Definition: A severe pontocerebellar hypoplasia that is characterized by hypotonia, progressive microcephaly and developmental delay, has_material_basis_in autosomal recessive inheritance of mutation in the EXOSC3 gene. (DO)
Synonyms: exact_synonym: PCH1B
broad_synonym: NON-SYNDROMIC PONTOCEREBELLAR HYPOPLASIA
primary_id: OMIM:614678
xref: NCI:C190872
G
Ampd2
adenosine monophosphate deaminase 2
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:23911318 PMID:25741868 PMID:28492532 PMID:34826127
NCBI chr 2:195,707,609...195,720,454
Ensembl chr 2:195,707,610...195,720,271
G
Atoh1
atonal bHLH transcription factor 1
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:25741868
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Chmp1a
charged multivesicular body protein 1A
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
G
Clp1
cleavage factor polyribonucleotide kinase subunit 1
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
G
Exosc3
exosome component 3
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia | ClinVar Annotator: match by term: Pontocerebellar hypoplasia type 1B
OMIM CTD ClinVar
PMID:16199547 PMID:18414213 PMID:22544365 PMID:23284067 PMID:23564332 PMID:23883322 PMID:23975261 PMID:24033266 PMID:24524299 PMID:24970098 PMID:25149867 PMID:25326635 PMID:25533962 PMID:25741868 PMID:25809939 PMID:27146152 PMID:27777260 PMID:28053271 PMID:28492532 PMID:28687512 PMID:29186371 PMID:29444210 PMID:29656927 PMID:30221345 PMID:30986545 PMID:31692161 PMID:31980526 PMID:33462000 PMID:36004024 More...
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
G
Rars2
arginyl-tRNA synthetase 2, mitochondrial
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:2706168 PMID:16199547 PMID:17847012 PMID:20635367 PMID:20952379 PMID:22086604 PMID:22569581 PMID:24033266 PMID:25356970 PMID:25533962 PMID:25741868 PMID:26083569 PMID:26539891 PMID:26795593 PMID:26968897 PMID:26970947 PMID:27061686 PMID:27290639 PMID:27683254 PMID:28492532 PMID:29881806 PMID:31102535 PMID:31216405 PMID:31429931 PMID:31474318 PMID:31980526 PMID:32071833 PMID:32725632 PMID:32860008 PMID:33798445 PMID:33926074 PMID:33972171 PMID:34085948 PMID:34717047 PMID:34869784 More...
NCBI chr 5:49,181,517...49,238,664
Ensembl chr 5:49,181,565...49,233,276
G
Sepsecs
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:9536098 PMID:17576681 PMID:20920667 PMID:23052947 PMID:23275319 PMID:24305467 PMID:25741868 PMID:25880436 PMID:26888482 PMID:27175728 PMID:27473727 PMID:27576344 PMID:28492532 PMID:29709707 PMID:31589614 PMID:31748115 PMID:32555262 PMID:33600046 PMID:34234304 PMID:35012964 PMID:35155316 PMID:36085396 More...
NCBI chr14:58,311,484...58,341,745
Ensembl chr14:58,311,499...58,341,740
G
Slc35a1
solute carrier family 35 member A1
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:24033266 PMID:25741868 PMID:28492532
NCBI chr 5:49,225,599...49,248,382
Ensembl chr 5:49,225,602...49,248,335
G
Tbc1d23
TBC1 domain family, member 23
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:28823707
NCBI chr11:43,303,355...43,361,507
Ensembl chr11:43,303,355...43,361,503
G
Tsen2
tRNA splicing endonuclease subunit 2
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:16199547 PMID:18414213 PMID:18711368 PMID:20301773 PMID:20952379 PMID:25741868 PMID:28492532 More...
NCBI chr 4:148,602,805...148,638,219
Ensembl chr 4:148,602,863...148,638,215
G
Tsen34
tRNA splicing endonuclease subunit 34
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:18414213 PMID:25741868 PMID:28492532
NCBI chr 1:65,517,324...65,525,194
Ensembl chr 1:65,517,330...65,524,412
G
Tsen54
tRNA splicing endonuclease subunit 54
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:9536098 PMID:16470708 PMID:17576681 PMID:18414213 PMID:18711368 PMID:19459882 PMID:20301773 PMID:20803644 PMID:20952379 PMID:20956791 PMID:21368912 PMID:21468723 PMID:21609947 PMID:23177318 PMID:23307886 PMID:23757202 PMID:24033266 PMID:24886362 PMID:25326635 PMID:25741868 PMID:26467025 PMID:26701950 PMID:27430971 PMID:27570394 PMID:27884173 PMID:28492532 PMID:29302074 PMID:29410950 PMID:30315573 PMID:32214227 PMID:32404165 PMID:34580403 More...
NCBI chr10:101,041,607...101,050,088
Ensembl chr10:101,042,503...101,050,087
G
Vps53
VPS53 subunit of GARP complex
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia
ClinVar
PMID:9536098 PMID:17576681 PMID:24577744 PMID:25741868 PMID:28492532 PMID:30100179 More...
NCBI chr10:60,919,820...61,038,674
Ensembl chr10:60,919,820...61,038,676
G
Vrk1
VRK serine/threonine kinase 1
ISO
ClinVar Annotator: match by term: Non-syndromic pontocerebellar hypoplasia | ClinVar Annotator: match by term: Pontocerebellar hypoplasia type 1B
ClinVar
PMID:25741868 PMID:28492532
NCBI chr 6:124,914,770...124,981,508
Ensembl chr 6:124,914,855...124,981,436
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all