Eif5b (eukaryotic translation initiation factor 5B) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Pathways
Gene: Eif5b (eukaryotic translation initiation factor 5B) Rattus norvegicus
Analyze
Symbol: Eif5b
Name: eukaryotic translation initiation factor 5B
RGD ID: 735017
Description: Predicted to enable several functions, including GTP binding activity; GTPase activity; and translation initiation factor activity. Predicted to be involved in regulation of translational initiation; ribosome assembly; and translational initiation. Predicted to be active in cytoplasm and synapse. Orthologous to human EIF5B (eukaryotic translation initiation factor 5B); PARTICIPATES IN translation initiation pathway; RNA transport pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: annexin V-binding protein ABP-7; eIF-5B; LOC308306; translation initiation factor IF-2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Eif5b-ps1  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8947,718,706 - 47,773,289 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl947,718,706 - 47,778,583 (+)EnsemblGRCr8
mRatBN7.2940,222,769 - 40,277,482 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl940,222,898 - 40,277,482 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx948,718,560 - 48,773,198 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0953,841,325 - 53,895,960 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0952,123,621 - 52,178,205 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0944,658,724 - 44,713,518 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl944,681,494 - 44,713,199 (+)Ensemblrn6Rnor6.0
Rnor_5.0944,354,546 - 44,409,587 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4936,937,415 - 36,993,650 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera937,976,326 - 38,029,828 (+)NCBICelera
RGSC_v3.1936,963,310 - 36,966,045 (+)NCBI
Cytogenetic Map9q21NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,6-tribromophenol  (ISO)
2,6-dimethoxyphenol  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (EXP)
antirheumatic drug  (ISO)
apigenin  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
CGP 52608  (ISO)
chloroprene  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
clofibrate  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
cocaine  (EXP)
coumarin  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
decabromodiphenyl ether  (ISO)
deoxynivalenol  (ISO)
dextran sulfate  (ISO)
dicrotophos  (ISO)
disodium selenite  (ISO)
elemental selenium  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
finasteride  (EXP)
flutamide  (EXP)
FR900359  (ISO)
furfural  (ISO)
glyphosate  (ISO)
gold atom  (ISO)
gold(0)  (ISO)
hexadecanoic acid  (ISO)
ivermectin  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
miconazole  (ISO)
mitomycin C  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
nitrates  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP)
perfluorooctanoic acid  (ISO)
piroxicam  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sodium fluoride  (ISO)
sulindac  (EXP)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
tungsten  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vitamin E  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA,ISO)
nucleus  (ISO)
synapse  (ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. The scanning mechanism of eukaryotic translation initiation. Hinnebusch AG Annu Rev Biochem. 2014;83:779-812. doi: 10.1146/annurev-biochem-060713-035802. Epub 2014 Jan 29.
4. Molecular cloning and characterization of annexin V-binding proteins with highly hydrophilic peptide structure. Ohsawa K, etal., J Neurochem 1996 Jul;67(1):89-97.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:10432305   PMID:12426392   PMID:12477932   PMID:22658674   PMID:22681889   PMID:31505169   PMID:35352799  


Genomics

Comparative Map Data
Eif5b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8947,718,706 - 47,773,289 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl947,718,706 - 47,778,583 (+)EnsemblGRCr8
mRatBN7.2940,222,769 - 40,277,482 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl940,222,898 - 40,277,482 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx948,718,560 - 48,773,198 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0953,841,325 - 53,895,960 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0952,123,621 - 52,178,205 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0944,658,724 - 44,713,518 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl944,681,494 - 44,713,199 (+)Ensemblrn6Rnor6.0
Rnor_5.0944,354,546 - 44,409,587 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4936,937,415 - 36,993,650 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera937,976,326 - 38,029,828 (+)NCBICelera
RGSC_v3.1936,963,310 - 36,966,045 (+)NCBI
Cytogenetic Map9q21NCBI
EIF5B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38299,337,389 - 99,401,326 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl299,337,371 - 99,401,326 (+)Ensemblhg38GRCh38
GRCh37299,953,852 - 100,017,789 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36299,320,266 - 99,383,160 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34299,412,394 - 99,474,760NCBI
Celera294,158,503 - 94,221,412 (+)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef293,719,194 - 93,782,572 (+)NCBIHuRef
CHM1_1299,958,605 - 100,021,494 (+)NCBICHM1_1
T2T-CHM13v2.0299,796,021 - 99,859,976 (+)NCBIT2T-CHM13v2.0
Eif5b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39138,037,091 - 38,094,660 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl138,037,091 - 38,094,660 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38137,998,010 - 38,055,579 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl137,998,010 - 38,055,579 (+)Ensemblmm10GRCm38
MGSCv37138,054,855 - 38,112,424 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36137,942,556 - 38,000,125 (+)NCBIMGSCv36mm8
Celera137,775,604 - 37,832,998 (+)NCBICelera
Cytogenetic Map1BNCBI
cM Map116.4NCBI
Eif5b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554705,622,128 - 5,676,533 (+)Ensembl
ChiLan1.0NW_0049554705,622,128 - 5,676,533 (+)NCBIChiLan1.0ChiLan1.0
EIF5B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21229,031,310 - 29,093,502 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A29,034,070 - 29,096,197 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A99,898,341 - 99,960,829 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A100,266,800 - 100,328,837 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A100,289,562 - 100,328,470 (+)EnsemblpanPan2panpan1.1
EIF5B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11043,247,536 - 43,342,754 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1043,244,704 - 43,342,575 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1043,171,425 - 43,266,587 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01044,117,126 - 44,212,388 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1044,118,093 - 44,212,219 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11043,830,346 - 43,925,445 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01044,112,733 - 44,207,859 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01044,295,141 - 44,390,392 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Eif5b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629285,116,933 - 85,170,825 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366611,394,738 - 1,452,640 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366611,398,526 - 1,452,530 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF5B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl354,861,758 - 54,905,810 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1354,861,759 - 54,930,826 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2357,499,007 - 57,566,154 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EIF5B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1143,066,147 - 3,128,498 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl143,066,150 - 3,127,861 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041170,666,757 - 170,729,411 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eif5b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247494,297,667 - 4,373,918 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247494,297,832 - 4,373,918 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Eif5b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14114,186,920 - 114,240,596 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Eif5b
728 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:245
Count of miRNA genes:167
Interacting mature miRNAs:187
Transcripts:ENSRNOT00000035785
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9534647950346479Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9875049253750492Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)93125043268875676Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)92956766474567664Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92956766483835942Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9621499551214995Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9875049253750492Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)93125043265651574Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9534647950416711Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)92103143049025574Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9621499551214995Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)93496059079960590Rat
1598823Memor16Memory QTL 161.9exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)93145606157460683Rat

Markers in Region
RH142776  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2940,272,947 - 40,273,053 (+)MAPPERmRatBN7.2
Rnor_6.0944,708,984 - 44,709,089NCBIRnor6.0
Rnor_5.0944,405,053 - 44,405,158UniSTSRnor5.0
RGSC_v3.4936,989,116 - 36,989,221UniSTSRGSC3.4
Celera938,025,294 - 38,025,399UniSTS
RH 3.4 Map9379.1UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map9q21UniSTS
RH129308  
Rat AssemblyChrPosition (strand)SourceJBrowse
Celera1934,813,948 - 34,814,132UniSTS
Celera938,029,562 - 38,029,746UniSTS
Cytogenetic Map9q21UniSTS
Cytogenetic Map19q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000035785   ⟹   ENSRNOP00000036844
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl947,741,094 - 47,773,289 (+)Ensembl
mRatBN7.2 Ensembl940,245,287 - 40,277,482 (+)Ensembl
Rnor_6.0 Ensembl944,681,494 - 44,713,199 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000111626   ⟹   ENSRNOP00000079038
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl947,718,706 - 47,778,583 (+)Ensembl
mRatBN7.2 Ensembl940,244,896 - 40,277,482 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000114110   ⟹   ENSRNOP00000079088
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl947,718,706 - 47,773,289 (+)Ensembl
mRatBN7.2 Ensembl940,222,898 - 40,277,482 (+)Ensembl
RefSeq Acc Id: NM_001110141   ⟹   NP_001103611
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8947,718,706 - 47,773,289 (+)NCBI
mRatBN7.2940,222,898 - 40,277,482 (+)NCBI
Rnor_6.0944,658,724 - 44,713,518 (+)NCBI
Rnor_5.0944,354,546 - 44,409,587 (+)NCBI
RGSC_v3.4936,937,415 - 36,993,650 (+)RGD
Celera937,976,326 - 38,029,828 (+)RGD
Sequence:
RefSeq Acc Id: NP_001103611   ⟸   NM_001110141
- UniProtKB: A0JN31 (UniProtKB/Swiss-Prot),   P70488 (UniProtKB/Swiss-Prot),   B2GUV7 (UniProtKB/Swiss-Prot),   A0A8I5ZM99 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000036844   ⟸   ENSRNOT00000035785
Ensembl Acc Id: ENSRNOP00000079038   ⟸   ENSRNOT00000111626
Ensembl Acc Id: ENSRNOP00000079088   ⟸   ENSRNOT00000114110
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2GUV7-F1-model_v2 AlphaFold B2GUV7 1-1216 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:735017 AgrOrtholog
BioCyc Gene G2FUF-27772 BioCyc
Ensembl Genes ENSRNOG00000023356 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000114110 ENTREZGENE
  ENSRNOT00000114110.1 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.10050 UniProtKB/Swiss-Prot
  3.40.50.300 UniProtKB/Swiss-Prot
  Translation factors UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7097275 IMAGE-MGC_LOAD
  IMAGE:7323915 IMAGE-MGC_LOAD
  IMAGE:7445700 IMAGE-MGC_LOAD
  IMAGE:9088271 IMAGE-MGC_LOAD
InterPro EFTU-type UniProtKB/Swiss-Prot
  P-loop_NTPase UniProtKB/Swiss-Prot
  Small_GTP-bd_dom UniProtKB/Swiss-Prot
  TF_GTP-bd_dom UniProtKB/Swiss-Prot
  TIF_IF2 UniProtKB/Swiss-Prot
  TIF_IF2_dom3 UniProtKB/Swiss-Prot
  TIF_IF2_dom3_sf UniProtKB/Swiss-Prot
  Transl_B-barrel_sf UniProtKB/Swiss-Prot
KEGG Report rno:308306 UniProtKB/Swiss-Prot
MGC_CLONE MGC:116421 IMAGE-MGC_LOAD
  MGC:156829 IMAGE-MGC_LOAD
  MGC:187399 IMAGE-MGC_LOAD
  MGC:189382 IMAGE-MGC_LOAD
NCBI Gene 308306 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5B UniProtKB/Swiss-Prot
  PTHR43381 UniProtKB/Swiss-Prot
Pfam GTP_EFTU UniProtKB/Swiss-Prot
  GTP_EFTU_D4 UniProtKB/Swiss-Prot
  IF-2 UniProtKB/Swiss-Prot
PhenoGen Eif5b PhenoGen
PRINTS ELONGATNFCT UniProtKB/Swiss-Prot
PROSITE G_TR_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000023356 RatGTEx
Superfamily-SCOP SSF50447 UniProtKB/Swiss-Prot
  SSF52156 UniProtKB/Swiss-Prot
  SSF52540 UniProtKB/Swiss-Prot
UniProt A0A0H2UHV4_RAT UniProtKB/TrEMBL
  A0A8I5ZM99 ENTREZGENE, UniProtKB/TrEMBL
  A0JN31 ENTREZGENE
  B2GUV7 ENTREZGENE, UniProtKB/Swiss-Prot
  P70488 ENTREZGENE
  Q4FZQ8_RAT UniProtKB/TrEMBL
UniProt Secondary A0JN31 UniProtKB/Swiss-Prot
  P70488 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Eif5b  eukaryotic translation initiation factor 5B  LOC308306  annexin V-binding protein ABP-7  Symbol and Name updated 1299863 APPROVED