Myrip (myosin VIIA and Rab interacting protein) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Myrip (myosin VIIA and Rab interacting protein) Rattus norvegicus
Analyze
Symbol: Myrip
Name: myosin VIIA and Rab interacting protein
RGD ID: 727731
Description: Enables protein kinase A binding activity. Involved in positive regulation of insulin secretion. Located in apical plasma membrane; dense core granule; and perinuclear region of cytoplasm. Orthologous to human MYRIP (myosin VIIA and Rab interacting protein); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: exophilin-8; myosin-VIIa- and Rab-interacting protein; rab effector MyRIP; slaC2-c; Slac2c; slp homolog lacking C2 domains c; synaptotagmin-like protein lacking C2 domains C
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88128,895,371 - 129,062,420 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8128,895,371 - 129,062,420 (+)EnsemblGRCr8
mRatBN7.28120,017,749 - 120,184,821 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8120,017,524 - 120,183,833 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8125,626,718 - 125,759,584 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08123,825,741 - 123,958,593 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08121,667,882 - 121,800,814 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08128,972,307 - 129,139,257 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8128,972,311 - 129,139,251 (+)Ensemblrn6Rnor6.0
Rnor_5.08128,171,783 - 128,337,841 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48125,317,671 - 125,478,667 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8119,163,194 - 119,324,938 (+)NCBICelera
RGSC_v3.18125,337,407 - 125,492,971 (+)NCBI
Cytogenetic Map8q32NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MyRIP, a novel Rab effector, enables myosin VIIa recruitment to retinal melanosomes. El-Amraoui A, etal., EMBO Rep 2002 May;3(5):463-70. Epub 2002 Apr 18.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. MyRIP anchors protein kinase A to the exocyst complex. Goehring AS, etal., J Biol Chem. 2007 Nov 9;282(45):33155-67. Epub 2007 Sep 7.
4. The small GTPase Rab27B regulates amylase release from rat parotid acinar cells. Imai A, etal., J Cell Sci. 2004 Apr 15;117(Pt 10):1945-53. Epub 2004 Mar 23.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12221080  


Genomics

Comparative Map Data
Myrip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88128,895,371 - 129,062,420 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl8128,895,371 - 129,062,420 (+)EnsemblGRCr8
mRatBN7.28120,017,749 - 120,184,821 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8120,017,524 - 120,183,833 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx8125,626,718 - 125,759,584 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08123,825,741 - 123,958,593 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08121,667,882 - 121,800,814 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.08128,972,307 - 129,139,257 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8128,972,311 - 129,139,251 (+)Ensemblrn6Rnor6.0
Rnor_5.08128,171,783 - 128,337,841 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.48125,317,671 - 125,478,667 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera8119,163,194 - 119,324,938 (+)NCBICelera
RGSC_v3.18125,337,407 - 125,492,971 (+)NCBI
Cytogenetic Map8q32NCBI
MYRIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38339,808,914 - 40,260,321 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl339,808,914 - 40,260,321 (+)Ensemblhg38GRCh38
GRCh37339,850,405 - 40,301,812 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36339,826,307 - 40,276,816 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34339,826,306 - 40,276,808NCBI
Celera339,793,218 - 40,244,467 (+)NCBICelera
Cytogenetic Map3p22.1NCBI
HuRef339,894,694 - 40,345,886 (+)NCBIHuRef
CHM1_1339,802,159 - 40,251,713 (+)NCBICHM1_1
T2T-CHM13v2.0339,822,295 - 40,275,401 (+)NCBIT2T-CHM13v2.0
Myrip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399120,132,996 - 120,305,167 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9120,130,579 - 120,303,907 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm389120,303,520 - 120,476,101 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9120,301,513 - 120,474,841 (+)Ensemblmm10GRCm38
MGSCv379120,213,191 - 120,383,952 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv369120,152,771 - 120,323,532 (+)NCBIMGSCv36mm8
Celera9120,765,412 - 120,944,453 (+)NCBICelera
Cytogenetic Map9F4NCBI
cM Map971.5NCBI
Myrip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542029,540,027 - 29,696,504 (-)Ensembl
ChiLan1.0NW_00495542029,542,479 - 29,697,646 (-)NCBIChiLan1.0ChiLan1.0
MYRIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2239,771,353 - 40,219,420 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1339,776,213 - 40,224,181 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0339,715,890 - 40,163,826 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1339,991,586 - 40,435,763 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl340,079,777 - 40,433,613 (+)EnsemblpanPan2panpan1.1
MYRIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1239,448,564 - 9,765,328 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl239,448,559 - 9,763,182 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha239,425,279 - 9,798,884 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0239,674,928 - 10,051,701 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl239,674,852 - 10,051,368 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1239,487,819 - 9,861,978 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0239,629,847 - 9,999,590 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0239,625,718 - 9,987,209 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Myrip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118195,783,381 - 196,114,170 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647328,982,604 - 29,252,745 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647328,921,837 - 29,252,737 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYRIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1324,347,660 - 24,556,735 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11324,347,574 - 24,556,743 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21326,806,466 - 26,855,152 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MYRIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1221,369,820 - 1,765,121 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl221,370,001 - 1,765,311 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041165,438,597 - 165,844,373 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myrip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473078,388,192 - 78,582,051 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Myrip
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v18111,551,199 - 111,685,183 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:107
Count of miRNA genes:95
Interacting mature miRNAs:99
Transcripts:ENSRNOT00000025460
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat
10450865Bw175Body weight QTL 1754.1total fat pad mass (VT:0015008)adipose tissue molecular composition measurement (CMO:0000484)884192326129192326Rat

Markers in Region
BF416406  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28120,167,549 - 120,167,780 (+)MAPPERmRatBN7.2
Rnor_6.08129,121,990 - 129,122,220NCBIRnor6.0
Rnor_5.08128,320,277 - 128,320,507UniSTSRnor5.0
RGSC_v3.48125,462,150 - 125,462,380UniSTSRGSC3.4
Celera8119,309,656 - 119,309,886UniSTS
RH 3.4 Map81284.4UniSTS
Cytogenetic Map8q32UniSTS
BF416438  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28120,162,186 - 120,162,279 (+)MAPPERmRatBN7.2
Rnor_6.08129,116,917 - 129,117,009NCBIRnor6.0
Rnor_5.08128,315,204 - 128,315,296UniSTSRnor5.0
RGSC_v3.48125,456,680 - 125,456,772UniSTSRGSC3.4
Celera8119,304,878 - 119,304,970UniSTS
RH 3.4 Map81284.4UniSTS
Cytogenetic Map8q32UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 160 91 90 59 58 59 6 321 158 11 139 80 92 31 16 16

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_182844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008766687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017595712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039081689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063265676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AY331984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000025460   ⟹   ENSRNOP00000025460
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8128,895,371 - 129,062,420 (+)Ensembl
mRatBN7.2 Ensembl8120,017,524 - 120,183,833 (+)Ensembl
Rnor_6.0 Ensembl8128,972,311 - 129,139,251 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000164781   ⟹   ENSRNOP00000104715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl8128,895,371 - 129,062,420 (+)Ensembl
RefSeq Acc Id: NM_182844   ⟹   NP_878264
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,371 - 129,062,420 (+)NCBI
mRatBN7.28120,017,749 - 120,184,821 (+)NCBI
Rnor_6.08129,003,687 - 129,137,284 (+)NCBI
Rnor_5.08128,171,783 - 128,337,841 (+)NCBI
RGSC_v3.48125,317,671 - 125,478,667 (+)RGD
Celera8119,163,194 - 119,324,938 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008766687   ⟹   XP_008764909
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,003,732 - 129,062,420 (+)NCBI
mRatBN7.28120,126,947 - 120,184,821 (+)NCBI
Rnor_6.08129,081,773 - 129,139,257 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039081681   ⟹   XP_038937609
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,460 - 129,062,420 (+)NCBI
mRatBN7.28120,017,845 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081682   ⟹   XP_038937610
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,465 - 129,062,420 (+)NCBI
mRatBN7.28120,017,843 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081683   ⟹   XP_038937611
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,846 - 129,062,420 (+)NCBI
mRatBN7.28120,018,178 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081684   ⟹   XP_038937612
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,846 - 129,062,420 (+)NCBI
mRatBN7.28120,018,178 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081685   ⟹   XP_038937613
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,650 - 129,062,420 (+)NCBI
mRatBN7.28120,018,031 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081686   ⟹   XP_038937614
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,951,345 - 129,062,420 (+)NCBI
mRatBN7.28120,073,710 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081687   ⟹   XP_038937615
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,460 - 129,062,420 (+)NCBI
mRatBN7.28120,017,845 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081688   ⟹   XP_038937616
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,460 - 129,062,420 (+)NCBI
mRatBN7.28120,017,845 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_039081689   ⟹   XP_038937617
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,005,436 - 129,062,420 (+)NCBI
mRatBN7.28120,127,814 - 120,184,821 (+)NCBI
RefSeq Acc Id: XM_063265675   ⟹   XP_063121745
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,841 - 129,062,420 (+)NCBI
RefSeq Acc Id: XM_063265676   ⟹   XP_063121746
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88128,895,850 - 129,062,420 (+)NCBI
RefSeq Acc Id: NP_878264   ⟸   NM_182844
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot),   D3ZTL2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764909   ⟸   XM_008766687
- Peptide Label: isoform X6
- Sequence:
Ensembl Acc Id: ENSRNOP00000025460   ⟸   ENSRNOT00000025460
RefSeq Acc Id: XP_038937610   ⟸   XM_039081682
- Peptide Label: isoform X1
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937609   ⟸   XM_039081681
- Peptide Label: isoform X1
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937615   ⟸   XM_039081687
- Peptide Label: isoform X4
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937616   ⟸   XM_039081688
- Peptide Label: isoform X5
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937613   ⟸   XM_039081685
- Peptide Label: isoform X1
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937611   ⟸   XM_039081683
- Peptide Label: isoform X1
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937612   ⟸   XM_039081684
- Peptide Label: isoform X1
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937614   ⟸   XM_039081686
- Peptide Label: isoform X3
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_038937617   ⟸   XM_039081689
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063121745   ⟸   XM_063265675
- Peptide Label: isoform X2
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot),   D3ZTL2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063121746   ⟸   XM_063265676
- Peptide Label: isoform X2
- UniProtKB: Q7TNY7 (UniProtKB/Swiss-Prot),   D3ZTL2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000104715   ⟸   ENSRNOT00000164781
Protein Domains
RabBD

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TNY7-F1-model_v2 AlphaFold Q7TNY7 1-856 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:727731 AgrOrtholog
BioCyc Gene G2FUF-28743 BioCyc
Ensembl Genes ENSRNOG00000018797 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000025460 ENTREZGENE
  ENSRNOT00000164781 ENTREZGENE
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot
InterPro FYVE_2 UniProtKB/Swiss-Prot
  Intracell_Transport_Effector UniProtKB/Swiss-Prot
  Myrip/Melanophilin UniProtKB/Swiss-Prot
  Rab_BD UniProtKB/Swiss-Prot
  Znf_FYVE_PHD UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
KEGG Report rno:360034 UniProtKB/Swiss-Prot
NCBI Gene 360034 ENTREZGENE
PANTHER MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED UniProtKB/Swiss-Prot
  RAB EFFECTOR MYRIP UniProtKB/Swiss-Prot
Pfam FYVE_2 UniProtKB/Swiss-Prot
  Rab_eff_C UniProtKB/Swiss-Prot
PhenoGen Myrip PhenoGen
PROSITE RABBD UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000018797 RatGTEx
Superfamily-SCOP SSF57903 UniProtKB/Swiss-Prot
UniProt A0ABK0LM24_RAT UniProtKB/TrEMBL
  D3ZTL2 ENTREZGENE, UniProtKB/TrEMBL
  MYRIP_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Myrip  myosin VIIA and Rab interacting protein      Symbol and Name status set to approved 1299863 APPROVED