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Gene: Dync2h1 (dynein cytoplasmic 2 heavy chain 1) Rattus norvegicus

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Symbol:

Dync2h1

Name:

dynein cytoplasmic 2 heavy chain 1

RGD ID:

71042

Description:

Enables dynein light intermediate chain binding activity. Involved in cilium assembly. Located in apical part of cell. Part of cytoplasmic dynein complex. Human ortholog(s) of this gene implicated in asphyxiating thoracic dystrophy and asphyxiating thoracic dystrophy 3. Orthologous to human DYNC2H1 (dynein cytoplasmic 2 heavy chain 1); PARTICIPATES IN phagocytosis pathway; vasopressin signaling pathway via receptor type 2; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cytoplasmic dynein 2 heavy chain 1; cytoplasmic dynein 2 heavy chain 1-like; cytoplasmic dynein heavy chain 2; Dhc1b; Dnch2; Dnchc2; dynein heavy chain isotype 1B; dynein, cytoplasmic, heavy chain 2; dynein, cytoplasmic, heavy polypeptide 2; dynein-like protein 4; LOC103689995

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DYNC2H1 (dynein cytoplasmic 2 heavy chain 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Dync2h1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dync2h1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DYNC2H1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DYNC2H1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dync2h1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DYNC2H1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DYNC2H1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dync2h1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dync2h1 (dynein cytoplasmic 2 heavy chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Dync2h1 (dynein cytoplasmic 2 heavy chain 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	DYNC2H1 (dynein cytoplasmic 2 heavy chain 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dync2h1 (dynein cytoplasmic 2 heavy chain 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	che-3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	btv	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dync2h1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	12,473,955 - 12,697,075 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	12,473,955 - 12,697,058 (-)	Ensembl				GRCr8
mRatBN7.2	8	4,189,067 - 4,412,183 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	4,189,257 - 4,412,183 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	8,150,654 - 8,371,658 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	6,448,441 - 6,669,441 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	4,448,735 - 4,671,840 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	5,217,054 - 5,436,969 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	5,217,217 - 5,429,581 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	5,224,193 - 5,444,010 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	8	5,158,973 - 5,196,018 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	3,826,843 - 4,072,644 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	5,755,003 - 5,975,984 (-)	NCBI		Celera
RGSC_v3.1	8	3,826,842 - 4,072,644 (-)	NCBI
Cytogenetic Map	8	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

asphyxiating thoracic dystrophy (ISO)

asphyxiating thoracic dystrophy 1 (ISO)

asphyxiating thoracic dystrophy 3 (ISO,ISS)

autosomal recessive polycystic kidney disease (ISO)

Beemer-Langer syndrome (ISO)

Breast Neoplasms (ISO)

ciliopathy (ISO)

congenital heart disease (ISO)

Desbuquois dysplasia (ISO)

Fetal Growth Retardation (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

Hirschsprung's disease (ISO)

intellectual disability (ISO)

Micrognathism (ISO)

newborn respiratory distress syndrome (ISO)

optic atrophy (ISO)

osteochondrodysplasia (ISO)

retinitis pigmentosa (ISO)

retinitis pigmentosa 1 (ISO)

short-rib thoracic dysplasia 6 with or without polydactyly (ISO)

VACTERL association (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,6-tribromophenol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amitrole (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

clorgyline (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

decabromodiphenyl ether (ISO)

doxorubicin (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

fenfluramine (ISO)

fenvalerate (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methapyrilene (ISO)

methylmercury chloride (EXP,ISO)

N,N-diethyl-m-toluamide (EXP)

N-ethyl-N-nitrosourea (ISO)

nickel atom (ISO)

nickel sulfate (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

ozone (ISO)

p-toluidine (EXP)

paracetamol (EXP)

permethrin (EXP)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

Triptolide (EXP)

triptonide (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell projection organization (IEA)

cilium assembly (IBA,IEA,IEP,ISO)

cilium movement involved in cell motility (IBA)

coronary vasculature development (ISO)

determination of left/right symmetry (ISO)

dorsal/ventral pattern formation (ISO)

embryonic limb morphogenesis (ISO)

forebrain development (ISO)

Golgi organization (IEA,ISO)

heart development (ISO)

intraciliary retrograde transport (IBA,ISO)

kidney development (ISO)

microtubule-based movement (IEA)

neuron differentiation (ISO)

non-motile cilium assembly (ISO)

positive regulation of smoothened signaling pathway (ISO)

protein localization to cilium (ISO)

protein processing (ISO)

spinal cord motor neuron differentiation (ISO)

Cellular Component

9+2 motile cilium (IBA)

apical part of cell (IDA,IEA,ISO)

axoneme (IBA,IEA,ISO)

cytoplasm (IEA)

cytoplasmic dynein complex (IBA,IDA,IEA,ISO)

cytoskeleton (IEA)

dynein complex (IEA)

Golgi apparatus (IEA,ISO)

microtubule (IEA,ISO)

motile cilium (IEA,ISO)

organelle (IEA)

plasma membrane (IEA)

Molecular Function

ATP binding (IEA)

dynein intermediate chain binding (IBA,IEA)

dynein light intermediate chain binding (IBA,IEA,IPI)

minus-end-directed microtubule motor activity (IBA,IEA,ISO)

nucleotide binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

phagocytosis pathway (IEA)

vasopressin signaling pathway via receptor type 2 (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Evidence for four cytoplasmic dynein heavy chain isoforms in rat testis.	Criswell PS and Asai DJ, Mol Biol Cell. 1998 Feb;9(2):237-47. doi: 10.1091/mbc.9.2.237.
2.	A novel cytoplasmic dynein heavy chain: expression of DHC1b in mammalian ciliated epithelial cells.	Criswell PS, etal., J Cell Sci. 1996 Jul;109 ( Pt 7):1891-8.
3.	NEK1 and DYNC2H1 are both involved in short rib polydactyly Majewski type but not in Beemer Langer cases.	El Hokayem J, etal., J Med Genet. 2012 Apr;49(4):227-33. doi: 10.1136/jmedgenet-2011-100717.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	Molecular structure of cytoplasmic dynein 2 and its distribution in neuronal and ciliated cells.	Mikami A, etal., J Cell Sci. 2002 Dec 15;115(Pt 24):4801-8.
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	Identification of dynein heavy chain genes expressed in human and mouse testis: chromosomal localization of an axonemal dynein gene.	Neesen J, etal., Gene 1997 Oct 24;200(1-2):193-202.
9.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
10.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
11.	GOA pipeline	RGD automated data pipeline
12.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
14.	Identification and molecular evolution of new dynein-like protein sequences in rat brain.	Tanaka Y, etal., J Cell Sci 1995 May;108 ( Pt 5):1883-93.

Additional References at PubMed

PMID:8666668	PMID:8812413	PMID:12802074	PMID:15755804	PMID:15866890	PMID:16061793	PMID:16229832	PMID:17289665	PMID:18488998	PMID:19056867	PMID:21525035	PMID:21552265
PMID:21723285	PMID:22689656	PMID:22871113	PMID:25807483	PMID:25830415

Genomics

Comparative Map Data

Dync2h1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	12,473,955 - 12,697,075 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	12,473,955 - 12,697,058 (-)	Ensembl				GRCr8
mRatBN7.2	8	4,189,067 - 4,412,183 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	4,189,257 - 4,412,183 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	8,150,654 - 8,371,658 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	6,448,441 - 6,669,441 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	4,448,735 - 4,671,840 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	5,217,054 - 5,436,969 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	5,217,217 - 5,429,581 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	5,224,193 - 5,444,010 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	8	5,158,973 - 5,196,018 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	3,826,843 - 4,072,644 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	5,755,003 - 5,975,984 (-)	NCBI		Celera
RGSC_v3.1	8	3,826,842 - 4,072,644 (-)	NCBI
Cytogenetic Map	8	q11	NCBI

DYNC2H1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	103,109,426 - 103,479,863 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	103,109,410 - 103,479,863 (+)	Ensembl			hg38	GRCh38
GRCh37	11	102,980,155 - 103,350,591 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	102,485,370 - 102,855,801 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	11	100,141,694 - 100,511,960 (+)	NCBI		Celera
Cytogenetic Map	11	q22.3	NCBI
HuRef	11	98,908,876 - 99,279,409 (+)	NCBI		HuRef
CHM1_1	11	102,863,127 - 103,233,529 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	103,113,153 - 103,483,765 (+)	NCBI		T2T-CHM13v2.0

Dync2h1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	6,928,550 - 7,177,619 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	6,928,503 - 7,184,446 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	6,928,550 - 7,178,306 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	6,928,503 - 7,184,446 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	6,928,503 - 7,177,046 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	6,928,503 - 7,177,046 (-)	NCBI		MGSCv36	mm8
Celera	9	4,333,469 - 4,580,163 (-)	NCBI		Celera
Cytogenetic Map	9	A1	NCBI
cM Map	9	1.0	NCBI

Dync2h1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	6,268,214 - 6,518,468 (+)	Ensembl
ChiLan1.0	NW_004955412	6,267,726 - 6,518,888 (+)	NCBI	ChiLan1.0	ChiLan1.0

DYNC2H1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	103,904,555 - 104,278,595 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	104,993,041 - 105,366,969 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	98,051,788 - 98,425,676 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	101,536,471 - 101,909,194 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	101,536,471 - 101,909,194 (+)	Ensembl			panPan2	panpan1.1

DYNC2H1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	28,566,604 - 28,727,416 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	28,388,664 - 28,727,334 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	28,326,886 - 28,673,935 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	28,436,359 - 28,778,770 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	5	28,468,389 - 28,813,742 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	28,354,759 - 28,693,562 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	28,528,813 - 28,868,231 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Dync2h1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	86,622,656 - 86,951,875 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936551	4,584,438 - 4,913,825 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936551	4,584,438 - 4,913,829 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DYNC2H1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	33,720,877 - 34,040,188 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	33,720,920 - 34,039,954 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	37,664,274 - 37,736,257 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DYNC2H1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	94,484,090 - 94,849,960 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	94,484,512 - 94,849,581 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	31,022,418 - 31,385,767 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dync2h1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624918	1,730,708 - 2,071,072 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624918	1,730,675 - 2,071,231 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dync2h1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	4,445,066 - 4,643,237 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dync2h1
1265 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	21
Count of miRNA genes:	21
Interacting mature miRNAs:	21
Transcripts:	ENSRNOT00000044174
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12880023	Bw184	Body weight QTL 184		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	10382540	55382540	Rat
9590084	Insglur5	Insulin/glucose ratio QTL 5	18.54	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	8	1	32882639	Rat
12880028	Cm103	Cardiac mass QTL 103		0.02	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	10382540	55382540	Rat
12880044	Am9	Aortic mass QTL 9		0.007	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	10382540	55382540	Rat
12880025	Cm102	Cardiac mass QTL 102		0.044	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	8	10382540	55382540	Rat

Markers in Region

RH134854

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	8	12,474,250 - 12,474,442 (+)	Marker Load Pipeline
mRatBN7.2	8	4,189,362 - 4,189,554 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	5,217,160 - 5,217,351	NCBI	Rnor6.0
Rnor_5.0	8	5,224,299 - 5,224,490	UniSTS	Rnor5.0
RGSC_v3.4	8	3,826,949 - 3,827,140	UniSTS	RGSC3.4
Celera	8	5,755,109 - 5,755,300	UniSTS
Cytogenetic Map	8	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	88	59	6	352	188	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_023024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB041881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D26495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U61748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000044174 ⟹ ENSRNOP00000043252

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	12,473,955 - 12,697,058 (-)	Ensembl
mRatBN7.2 Ensembl	8	4,189,257 - 4,412,183 (-)	Ensembl
Rnor_6.0 Ensembl	8	5,217,217 - 5,429,581 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112659 ⟹ ENSRNOP00000097714

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	12,473,955 - 12,697,058 (-)	Ensembl
mRatBN7.2 Ensembl	8	4,189,257 - 4,412,183 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000130124 ⟹ ENSRNOP00000101717

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	12,525,505 - 12,697,058 (-)	Ensembl

RefSeq Acc Id:

NM_023024 ⟹ NP_075413

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	12,473,955 - 12,697,058 (-)	NCBI
mRatBN7.2	8	4,189,067 - 4,412,183 (-)	NCBI
Rnor_6.0	8	5,217,054 - 5,436,969 (-)	NCBI
Rnor_5.0	8	5,224,193 - 5,444,010 (-)	NCBI
RGSC_v3.4	8	3,826,843 - 4,072,644 (-)	RGD
Celera	8	5,755,003 - 5,975,984 (-)	NCBI

Sequence:

show sequence

GGCCTTTAGGATTTGCGTCTCTGCAGGTGGAGCCTCAGTCTCCCGAGTTTTTCGGGCGAGTTTC
CAGAGGGAAGTCCTTTATAAAAATCATGAACGCTCCACAGCTGGCGAGCGAAGTAATCTGATGT
CGACCCTGATACTTGGTTGTGGTTTGCACGTGCCGCGGAAGCACTAGAACTCAGCACCAGAAAG
GAAAGATACACTAATAGAAGGAACTCCCAGCACATCCAATCGATGAGCGCAGCAATCCTCAGCC
TTGCTTGCCGGCCCCAGACGTCGTACTTCCGGTGCGCGCTCCCTGAGCCTGAAGCGGTCGCCAT
AGCAACGGACCTTGGCAACTACCAAGTGTAGTAGTGAGGCCAGAGGCCACTGTGCCTCTCCATC
TCTGAGGCCATGGCGGGAAGCCTCAGCGATGTCCGTAAACTCTTTCTTTTTACGACCACCCAGA
ATTACTTCGGACTGAGACCGGAGCTCTGGGACCAGACCCCGTTGAGCAATTGCCCGGAGGTGAA
CAACTTCTTGGACGACGGGAACCAGATGCTTCTTCGGGTGCAGCGGTCCGATGCTGGGCTGGCC
TTTTCCAACACGATTGATTTTGATGACACAAAAGACAAAGTGCTGGTGTTTTTCAAGCTCCGAC
CAGAAGTAATTACAGATGGCAATCTGCATACCAACATTCTTGTTTCCTCTATGCTGGAATCGCC
TATCAACTCCCTTTACCAAGCAGTGCGGCAGGTGTTTGCACCCATGTTGCTGAAGGACCAGGAA
TGGAGCAGAAACTTTGATCCTAAACTTCAGAATCTTTTGAGTGAACTAGAAGCTGGATTGGGTG
TAGTCCTACGAAAATCAGATACTAACTTACCCAAGCTGAAACTTAAGGAAGACGATACTAGAGG
TATTCTCACACCAAGTGATGAATTCCAGTTTTGGATAGAACAAGCTCATCGTGGGAGCAAACAG
ATTAGTAAAGAAAGAGCCAGTTATTTTAAGGAATTATTTGAAACAATTGCAAGGGAATTTTATA
ACTTGGACAGTCTGTCCTTGCTAGAAGTTGTTGACTTGGTGGAGACAACTCGGGATGTTGTAGA
TGATGTGTGGCGACAGGCAGAGCATGATCATTACCCCGAGTCACGCATGCTGCATCTGCTGGAT
GTCATAGGTGGTTCATTTGGAAGGTTTGTTCAGAAAAAGCTGGGAAGCTTGAAACTGTGGGAAG
ACCCTTATTATCTCGTGAAAGAAAACCTTAAAGCTGGCATTTCCATTTGTGAACAGTGGGTGAT
AGTCTGCAGTCACCTCACAGGCCAGGTCTGGCAGCGCTATGTCCCTCATCCATGGAAAAGTGAG
AAGTATTTCCCAGAAACTCTTGACAGACTGGGCAAACGGCTGGAGGAGGTCTTGGCTATTCGAA
CAATTCATGAGAAGCTCTTGTATTTTTTACCTGCCAGTGAGGAGAGAATTGTATGCCTGTCTCG
AGTGTTTGAACCTTTTACTGGCGTGAACCCTGTGCAGTACAATCCTTATACTGAGCCTTTATGG
AAAGCTGCAGTGTCTCAGTATGAGAAGATCATTGCACCAGCAGAGCAGAAAATAGCAGGGAAAT
TAAAGAATTATATTTCAGAAATTCAAGATAGTCCACAGCAGCTTCTCCAAGCGTTTCTAAAATA
CAAAGAATTGGTGAAGCGTCCCACCATAAGCAAAGAACTGATGTTAGAGAGAGAGACTTTACTG
GCAAGACTTGGGGATTCAGCTAAAGATTTTCGATTGGACTTTGAGAATCGGTGCCGAGGAATTC
CCGGTGATGCATCTGGACCACTTTCTGGCAAAAATCTCTCAGAAGTTGTGAATAATATTGTTTG
GGTTCGTCAGTTGGAATTGAAGGTAGACGATACTATCAAGATTGCAGAAGCGCTTTTGTCTGAC
TTGTCAGGATTTCGATCTTTTCATCGAAGTGCTGAAGACCTCTTGGACCAGTTCAAGCTCTATG
AACAAGAACAGTTTGATGACTGGTCAAGAGAAGTCCAGTCAGGGTTGTCTGACTCCAGGTCAGG
TTTGTGTATTGAGGCCAACAGCCGAATAATGGAATTGGATCCTAATGATGGGGCATTAAAAGTT
CATTATTCTGATCGCCTGGTGATTCTTCTGAGAGAAGTCCGTCAGCTTTCTGCCCTGGGCTTTG
TCATTCCTGCCAAAATACAGCAGGTTGCAAATGTTGCTCAGAAGTTCTGCAAGCAAGCGATCAT
TCTTAAGCAAGTGGCACATTTTTACAATTCTATTGATCAACAGATGATTCAGAGTCAGAGGCCA
ATGATGCTGCAGTCTGCCTTAGCATTTGAACAGATAATTAAAAATTCAAAGGCAGGGAGCGGAG
GCAAGTCACAGATTACTTGGGACAATCCTAAAGAACTAGAAGGCTACATCCAGAAACTCCAAAA
TGCTGCTGAGCGACTTGCCACTGAGAATCGAAGGCTAAGAAAGTGGCATATTACGTTTTGTGAA
AAGGTGGTCATTCTTATGAATATTGATCTACTTCGGCAGCAGCAGCGTTGGAAGGATGGGCTGC
AGGAGCTGAGAACTGGCTTAGCGAGTGTGGCCGCACAGGGCTTCCAACCCAGTGACATGCGTGC
GTGGCGGCAGCACTGGAACCACCAGCTGTACAAGGCTCTGGAGCATCAGTATCAGATGGGTCTG
GAGGCACTGAACGAGAACCTGCCAGAAATAAACGTCGACTTAACCTACAAACAGGGAAGGTTAC
AGTTTAGACCCCCTTTTGAAGAAATCCGGGCTAAATATTACAGAGAAATGAAGAGGTTCATCGG
AATTCCGAATCAGTTTAAGGGTGTGGGCGGGGCTGGAGATGAATCAATATTTTCTGTCATGATT
GACAGAAATGCAAGTGGATTTCTGACTATTTACAGCAAAGCAGAAGACCTGTTTAGAAGACTTT
CAGCTGTATTGCACCAACATAAGGAATGGGTTGTGATTGGACAGGTCGACATGGAAGCTCTGGT
CGAAAAGAACCTTTCTACTGTCCATGATTGGGAGAAAAATTTTAAAGCATTGAAAATAAAAGGG
AAAGAAGTTGAACGGCTTCCCAGTGCTGTCAAGGTGGACTGTCTCAACATCAACTGCAGCCCTG
TGAAGACTGTGATCGATGACCTCATCCAGAAGTTATTTGATCTGCTTGTGCTTTCTCTGAAGAA
GTCCATCCAGACTCATATACATGAAATTGATACATTTGTTACTGAGGCTATGAAGGTCTTAACA
GTTATACCTCAATCTGTGGAAGAAATAGGAGATACAAATTTACAGTATAGTAACCTGCAGGATC
GGAGGCCAGAGATTTTGCCCTTGTTTCAAGAAGCTGAAGACAAAAACAGGCTTTTGCGAACTGT
GGCAGGTGGAGGGGTAGAGACAGTTAGCAATCTGAGAGCCAAGTGGGACAAATTCGAGCTGATG
ATGGAAAGTCACCAACTTATGATTAAAGATCAGATAGAAGTGATGAAGGGAAATGTGAAGTCCC
GCCTTCAGATCTATTACCAAGAGTTGGACAAGTTCAAGGCTCGCTGGGACCAGTTGAAACCTGG
GGATGATATTATTGAAACTGGCCAACAAAATACCATGGATCAAAGTGCAAAGTCTATAAAGGAG
AAAAAAATTGAGTTTGATGATCTGGAAGTCATAAGAAAGAAGCTAGTTGATGACTGCCATCATT
TTGGACTAGAAGAGTCTAACTTCTCTTTGGCATATAGCATCTCTAAGGACATTGAAAGCTGTGC
ACAGATTTGGGCTCTTTATGAGGAGTTCCAGCAAGGACTCCAGGAAATGGCCAAAGAAGATTGG
ATTACTTACCGGACTAAGATCTACATATTTGAAGAATTTTTGATTAACTGGCATGAGAGATTAA
GGAAGGTTGAAGAACATTCAGTCATGACAGTGAAGTTACAGTCAGAAGTTGACAGATACAAAAT
TATTATTCCTATCCTGAAATATGTGAGAGGGGAGCATCTTTCTCCAGACCACTGGCTTGACCTT
TTTCGTTTACTTGGCCTTCCTCGAGGGACTAGTCTAGAGAAACTACTGTTTGGTGACCTGCTCA
GAGTCGCTGATACGATTGTGGAGAAAGCCTCAGACCTTAAAGATTTAAATAGTCGGGCACAAGG
GGAAGTTACCATCAGAGAAGCTTTGCGTGAACTTGATCTATGGGGAGTTGGAGCAGTGTTCTCA
TTAATTGATTATGAAGACAGCCAGAATCGAACTATCAAGCTGATTAAAGACTGGAAAGACATAG
TGAACCAGGTTGGAGATAATAGATGCCTTCTTCAGTCCTTAAAAGATTCTCCATATTACAAAGG
ATTTGAAGATAAAGTATCAATTTGGGAAAGAAAACTTGCACAGTTGGATGAGTACCTGCAGAAT
TTGAACCATATCCAGAGAAAATGGGTATATTTAGAGCCCATTTTTGGGCGTGGAGCTTTGCCTA
AAGAACAGACACGCTTCAACAAAGTTGATGAAGATTTCAGATCAATAATGATGGACATCAGGAA
AGACAGTAGAGTCACCACATTGACTACTCATGCAGGAATCAGAAACACTCTGCTGACGATACTT
GATCAGCTTCAAAGATGCCAGAAATCCCTAAATGAATTTTTGGAGGAAAAACGTTCAGCATTCC
CAAGATTTTATTTTATTGGTGATGATGACTTGTTAGAAATCCTGGGCCAGTCTACCAACCCGTC
AGTGATTCAGTCCCATCTGAAGAAGTTGTTTGCCGGTATCAACAGTGTGTGCTTTGATGAGGAG
TCCAAACATATAACTGCAATGAGGTCACTGGAGGGAGAAGTGGTACCTTTTAAGAGTAAAGTTC
TCCTATCAAATAATGTAGAGGCATGGTTGAATGATCTGGCTTTGGAAATGAAGCAAACTCTGAA
ACAGTTGTTGAAAGAATGTGTTACAGCTGGGCGAAGTTCACAAGGTGCAATTGACCCATCTCTC
TTCCCTTCCCAGATACTGTGTTTGGCTGAGCAGATCAAGTTTACTGAAGATGTAGAAGATGCCA
TCAGGGACCACAGTCTCCACCAGATTGAAGCACAGCTCGCAGCTAAGTTGGAACGCTACACCAG
TGTTGACACAAGCTCTGAGGACCCAGGGAATTCAGAATCAGGAATTCTGGAGCTTAAGCTTAAA
ACACTAATTCTTGATATTATTCATAATATTGATATTGTGAAGCAATTAAACCAAGCACAAGTTC
ATACAACTGATGACTGGGCTTGGAAGAAACAAGTTAGATTCTACATGAAAAGTGACCATACATG
CTATGTTCAAATGGTGGATTCTGAACTTCAGTATACATATGAGTACCAGGGTAATGCACCCAAG
CTGGTTTATACTCCACTGACAGACAAGTGCTACCTAACTCTCACTCAAGCCATGAAGATGGGAC
TTGGAGGGAATCCCTATGGACCCGCTGGGACTGGAAAAACTGAGTCAGTAAAGGCTCTAGGTGG
ACTTCTTGGGAGACAAGTTTTGGTTTTTAACTGTGATGAGGGCATTGATGTGAAATCAATGGGG
CGGATATTTGTTGGTTTGGTGAAATGCGGGGCCTGGGGTTGCTTTGATGAGTTCAATCGACTGG
AAGAAGCTGTTCTTTCAGCCGTTTCCATGCAGATCCAGACCATTCAGGATGCTTTGAAGAACCA
CAGAAGTGTGTGTGAGCTGCTTGGCAAAGAGGTTGAAGTAAATGCCAATTCTGGAATTTTTATC
ACCATGAATCCCGCTGGAAAAGGTTATGGAGGAAGACAAAAACTTCCGGATAACCTTAAACAGC
TCTTCAGGCCAGTGGCAATGTCGCGTCCAGACAATGATCTCATAGCAGAAGTAATTCTGTATTC
AGAGGGCTTCAAAGATGCTAAAGAATTAGGCAGAAAGTTGGTCGCTATTTTCAACCTATCTAGG
GAACTTTTGACTCCTCAGCAACATTATGACTGGGGACTGAGAGCTTTGAAGACAGTTCTAAGAG
GAAGTGGGAATCTTCTGAGACAGTTGAAGAAAAGTGGCACAAAACAAGATGTTAATGAAAATCA
CATTGTGGTGCAAGCATTGAGACTTAATACAATGTCAAAATTCACATTCGCTGATTGCACACGG
TTTGATGCACTGATTAAAGATGTCTTCCCTGGCATTGACTTTAAAGAAGTAGAATACAATGAAC
TAAGTTCTGCATTGAAGCAAGTCTTTGAGGAGGCCAATTATGAAGTCATACCCAATCAGATGAA
GAAGGCTCTAGAGTTATATGAGCAGTTGCGCCAAAGGACGGGCGTTGTTATTGTTGGTCCAAGT
GGTGCTGGCAAGTCTACCCTTTGGAGAATGTTAAGGGCTGCACTTTGTAAAATTGGCAAAGTAG
TAAAACAGTACACTATGAATCCCAAAGCAATGCCGAGACATCAGTTATTAGGACACATTGATAT
GGATACAAGAGAATGGTCTGATGGTGTCTTGACAAATAGTGCTCGCCAAGTAGTTCGTGAGCCT
CAAGATGTCAGCTCATGGATAATCTGTGATGGTGACATTGACCCTGAATGGATAGAATCTCTGA
ATTCTGTTCTGGATGATAATCGGCTGCTCACCATGCCCAGTGGAGAAAGGATTCAGTTTGGTCC
AAATGTTAACTTTGTATTTGAAACTCATGATTTAAGTTGTGCTTCGCCAGCCACAATATCTAGA
ATGGGAATGATATTTCTTAGTGATGAAGAGACAGATCTTAATTCTCTCATAAAATCTTGGTTGA
GGAATCAGCCTGTTGAATACAGAAGTAATCTCGAAAACTGGATTGGAGATTATTTTTCAAAAGC
GTTACAGTGGGTTTTAAAGCAGAATGATTATGTGGTAGAAACAAGTTTGGTTGGGACTGTGATG
AATGGTTTGTCCCACCTCCATGGATGCAAATATCATGACCAGTTTATTATTAATCTTATACGAG
GACTTGGTGGAAATCTGAATATGAAATCGCGTCTGGAATTTACCAAGGAGGTCTTTAATTGGGC
ACGGGAGACCCCTCCTGACTCTCACAGGCCAATGGACACCTACTTTGACTGTGACCGAGGGCAG
TTAGCGTCCTATGTACTGAAGAAGCCAGAGAGCCTGACAGCTGATGACTTCAGCAGTGGCCACA
GCCTTCCTGTCATTCAGACTCCTGATATGCAGCGAGGTTTAGATTATTTCAAACCCTGGCTAAG
TTCAGAAACCAAACAGCCATTTATTCTGGTAGGACCAGAAGGATGTGGCAAAGGGATGCTGCTC
AGGTATGCCTTCTCTCAACTCCGCTCCACCGAGATTGCCACTATCCACTGCAGTGCCCAGACTA
CTTCTCGACATCTTCTGCAGAAACTGAGCCAGACTTGCATGGTAATCAGTACAAATACTGGTCG
AGTATACAGACCAAAAGATTGTGAAAGACTTGTTTTGTATCTAAAAGATATCAACCTGCCCAAG
CTTGATAAATGGGGGACCAGCACTTTGGTGGCTTTCCTCCAGCAGGTGTTGACATATCAAGGAT
TTTATGATGAAAATTTGGAATGGGTTGGACTGGAGAATATTCAAATTGTAGCTTCCATGTCAGC
TGGAGGAAGATTGGGGCGACACAAGCTGACCACCAGGTTTACATCTATTGTTCGTCTTTGTGCC
GTCGATTACCCAGAAAGAGAACAGTTACAGACAATCTATGGAGCATATTTGGAAGCAGTTCTGC
ACAAAAATCTGAAGAATCATTCTATTTGGGGTTCTTCATCAAAAATTTATCTCTTAGCAGGCTC
TATGGTGCAGGTGTATGAACAGGTGCGGGCTAAATTCACAGTGGATGATTACAGCCACTATTTC
TTCACACCCTGCATTCTTACTCAGTGGGTTCTTGGCTTGTTCAGATATGATTTAGAAGGAGGAT
CCTCTAACCATCCATTAGATTATGTGCTAGAAGTTGTCGCCTATGAAGCACGGCGCTTGTTTCG
GGACAAAATTGTTGGCGTGAAGGAGCTGCATTTGTTTGATAACATTTTAACTTCGGTGCTCCAA
GGAGACTGGGGCTCAGACATACTGGACAACATGGCAGATAGTTTCTATGTTACATGGGGAGCCC
AACATATCTCAGGAGCAAAGATAGCTCCAGGACAGCCTTTACCTCCGCATGGGAAACCACTTGG
CAAACTGAGCTCTGCAGACCTGAAGGATGTCATTAAGAAGGGTCTTATTCATTATGGACGAGAT
AACCAGAATTTAGACATTTTACTCTTCCAAGAAGTTCTGGAATACATGTCAAGGATAGACAGAG
TACTGAGTTTCCCTGGAGGCTCCCTTCTGTTGGCAGGACGAAGCGGCGTGGGGCGGCGGACTGT
CACGTCTTTGGTCAGTCACATGCACGGTGCTGTGCTCTTCTCCCCGAAGATCTCCAGGGGCTAC
GAGCCGAAGCAGTTCAGAACCGACCTCAAGCATGTACTGCACCTTGCAGGAATTGAAGCACAGC
AGGTAGTCTTACTTCTTGAGGATTACCAGTTTGTACATCCCACATTCTTGGAGATGATCAATAG
CCTTTTGTCTTCAGGCGAGGTTCCTGGACTGTATACTCTTGAAGAATTGGAGCCTTTGCTGTTG
CCTCTGAAAGACCAAGCTTCTCAGGATGGATTTTTTGGACCAGTCTTCAATTACTTCACATACA
GAATTCAACAAAACTTGCATATTGTCTTGATTATGGATTCTGCAAATCTGAACTTCATAATAAA
CTGTGAGAGTAATCCAGCTTTGCATAAGAAGTGCCGGGTGCTGTGGATGGAGGGCTGGTCAGAC
AGCAGTATGAAGAAGATACCAGAAATGTTATTCAGTGAAGCAGACATCGAAGAAAAATATGAAA
AAAAAAGAAAAGATGAAAAGAAAAAAAGTTCAGTTGATCCTGACTTCATAAAGTCATTCTTATT
GATCCATGAGTCTTGCAAAGCTTACGGGGCCACCCCAAGCAGGTACATGACCTTTCTGCGTGTG
TATTCTGCCATCAGCAGCAGCAAGAGGAAGGAGCTACTGAAGAGACAGAGTCATTTGCAGGCTG
GCGTGTCCAAACTAAATGAAGCCAAAGCTCTTGTGGATGAGCTGAACAGAAAGGCCGGAGAGCA
GAGTATCCTGCTTCGAATAAAGCAGGATGAAGCAGACTCTGCCCTTCAGGAGATCACAGTGTCC
ATGCAGGATGCTAGTGAGCAAAAGACAGAACTTGAAAGACTGAAACATCGGATAGCAGAAGAAG
TTGTTAAAATTGAAGAGAGAAAAAGTAAAATTGATGATGAATTAAAAGAAGTACAACCTCTAGT
CAATGAAGCTAAGCTAGCAGTTGGAAACATTAGGCCAGAATCTCTTTCAGAAATCCGTTCACTC
CGCATGCCACCAGATGTAATCCGAGATATTCTTGAAGGAGTTTTGAGGTTAATGGGTATCTTTG
ATACATCATGGGTAAGCATGAAAAGCTTCCTTGCAAAAAGGGGTGTGAGAGAAGACATTGCAAC
TTTTGATGCACGGAACATCCCTAAAGAGATACGAGAGAGTGTGGAGGAGCTTCTCTTCAAAAAC
AAAGCCTCTTTTGATCCAAAGAATGCTAAGCGTGCCAGCACTGCAGCTGCTCCTTTGGCTGCTT
GGGTAAAGGCCAATGTACAGTACTCCCATGTCTTGGAACGGATCCAGCCTCTGGAAACAGAGCA
GTCAGGATTAGAATTAAATTTGAAGAAAACTGAAGACAGGAAAAGGAAGCTAGAAGATCTTCTG
AACTCTGTTGGTCAGAAAGTGTCAGAACTCAAAGAAAAATTTCAGAGCAGGACTTCAGAAGCTG
CCAAACTGGAAGCTGAAGTCAGCAAGGCACAGGAGACCATCAAAGCTGCAGAGGTCCTCATTAG
TCAGCTAGACAGAGAACACAGGAGATGGAATGCCCAGGTTGCTGAGATAGCTGAAGAGTTAGCC
ACTCTCCCCAAAAGAGCTCAGCTAGCGGCCGCTTTCATCACCTATCTTTCTGCTGCTCCAGAAG
GCCTCAGGAAGAACTGTCTGGAAGAGTGGACGAAGGCAGCTGGCCTCGAGAAATTTGATCTCAG
GCGGTTTCTCTGTACTGAAAGTGAGCAGTTGATCTGGAAAAGTGAAGGCCTTCCATCTGATGAC
CTTTCCATTGAGAATGCCCTTGTGATCTTACAGAGTCGAGTGTGCCCATTTCTGATTGATCCAT
CTTCTCAGGCAACAGAGTGGTTAAAGACACATCTGAAGGACTCACATTTGGAAGTTATTAACCA
ACAGGACAGTAACTTTATCACAGCTCTTGAGTTGGCAGTACGTTTTGGGAAAACCCTCATTATA
CAAGAGATGGATGGAGTAGAACCTGTTCTTTATCCGCTGCTGAGACGAGATCTGGTTGCTCAAG
GACCTCGGTATGTGGTACAAATAGGTGACAAGATCATTGACTACAATGAAGATTTCCGCCTTTT
CTTGTCAACAAGAAATCCAAATCCTTTCATCCCACCGGATGCTGCATCCATCGTGACTGAGGTG
AACTTTACTACAACAAGAAGTGGACTGCGAGGACAGCTTTTAGCTTTAACCATTCAGCATGAAA
AACCTGACCTAGAAGAGCAGAAAACAAAACTATTACAGCAGGAAGAAGATAAGAAAATACAGCT
GGCTAGACTTGAGGAGTCTCTGTTAGAGACACTTGCCACATCTCAAGGTAATATTTTGGAAAAT
AAGGATTTGATTGAATCTTTGAATCAGACAAAAGCAAGCAGTGCTCTTATTCAAGACTCACTTA
AAGAATCTTACAAACTCCAGATTTCCCTTGATCGGGAGCGTGATGCCTACCTGCCTCTGGCTGA
GAGTGCCAGCAAGATGTACTTCATCATCTCCGACTTGTCCAAGATTAATAACATGTACCGTTTC
AGTTTGGCTTCTTTTCTCCGACTTTTTCAACGAGCTCTGCAGAACAAGCAGGACTCTGAAAGTA
CAGAACAAAGAATCCAGTGTCTCGTGAATTCATTGAAACATATGGTTTATGAATATATATGCAG
ATGCCTGTTTAAGGCTGACCAGTTGATGTTTGCTTTGCATTTTGTTCGAGGAATGCATCCTGAA
TTTTTTCAAGAAAATGAATGGGATACATTCACAGGTGTGGTTGTTGGAGACATGCTGCGCAAAG
CTGACTCTCAACAGAGAATTCGTGATCAACTTCCATCTTGGATAGATCAGGAAAGGAGCTGGGC
AGTTGCAACATTGAAGATCTCTCTCCCTGGTCTCTACCAGACTCTCTGCTTTGAAGATGGGACA
CTTTGGCGTACTTACTACCATCACTCGATGTGTGAACAGGAGTTTCCATCAATTCTCGCAAAGA
AAGTTTCCTTATTTCAGCAGGTTCTTGTAGTTCAGGCTCTGCGGCCAGACAGACTGCAGAGTGC
CATGGCTCTGTTTGCCTGCAAGGCTCTGGGGTTAAAGGAGTTATCCCCTCTTCCTCTGAACCTC
AAACGCTTATACAAGGAGACACTTGAGATTGAGCCCATTTTGATCATAATCTCTCCGGGGGCTG
ACCCTTCTCAGGAACTTCAGGAACTTGCTAATGCTGAAAGAAGCAGTGAGCGTTATCACCAGGT
TGCCATGGGTCAAGGTCAAGCTGATTTAGCAATTCAGATGCTAAAAGAATGCGCCCGAAATGGA
GACTGGCTCTGTTTGAAGAACTTACATCTCGTAGTGTCTTGGCTTCCAGTTCTGGAGAAGGAAT
TGAATACTCTTCAACCTAAAGAAAGCTTTCGTCTCTGGCTCACTGCAGAAGTTCATCCCAACTT
TACTCCCATATTACTCCAATCAAGTCTAAAGATAACATATGAGTCACCTCCAGGTTTGAAGAAG
AATTTGATGCGCACTTATGAGTCTTGGACTCCTGAGCAAATTAGCAAAAAAGATAATATACACC
GAGCTCATGCTCTTTTTAGCTTAGCATGGTTTCATGCTGCCTGTCAAGAAAGAAGAAATTTTAT
TCCACAGGGTTGGACCAAGTTTTACGAGTTTTCCTTATCAGATCTTCGGGCTGGGTACCACGTC
ATTGACAGGCTCTTCGATGGTTCCAAAGATGTACAGTGGGAATTTGTACATGGCTTACTTGAAA
ATTCTATTTATGGAGGACGTATAGATAACTATTTTGATCTTAGAGTTCTTCAGTCCTACTTGAA
GCAGTTTTTTAATTCTTCAATAATTGATGTACTAAACCAAAGGAATAAGAAAAGCATTTTCCCA
TATTCCATCTCTCTCCCAGACTCGTGCAGCATTTTGGACTATCGTGCTGTCATTGAGAAGCTCC
CAGAGGATGACAAACCCAGCTTCTTCGGTCTGCCCGCCAACATCGCCCGCTCCTCTCAGCGCAT
GACCAGTTCCCAGGTTATCTCCCAGCTCAGGATCTTGGGAAGATCTGTCACAGCGGGTTGCAAA
TTTGACAGAGAAATCTGGTCAAATGAACTTTCCCCCGTTCTCAATCTTTGGAAGAAGCTGAATC
AGAATTCAAACCTAATTCATCAAAAAGTATCACCTCCTAATGATCGACAAGGATCTCCGATATT
ATCATTCATCATTCTTGAGCAGTTCAATGCCATCCGCTTGGTTCAAAGTGTTCATCAGTCGCTT
GCTGCCCTCAGCAAAGTCATCAGGGGAACTACTTTGCTGAGTTCAGAAGTACAAAAGCTGGCAA
GTGCTTTATTAAACCAGAAGTGTCCTCTCACATGGCAGAGCAAGTGGGAAGGCCCCGAGGATCC
CCTCCAGTACCTGCGCGGTCTCGTAGCACGAACACTTGCAATTCAGAATTGGGTAGAGAAAGCT
GAGAAGCAAGCTCTTCTCGCGGATACGCTTGACCTGTCTGAGCTCTTCCATCCCGACACATTCC
TCAATGCTCTTCGCCAGGAAACGGCAAGGGCAACAGGCTGCTCTGTGGATAGCCTTAAATTTGT
AGCATCCTGGAAAGGCCGACTTCAAGAAGCAAAGCTGCAGATTAAGATCAGCGGTCTGTTACTG
GAAGGCTGCAGTTTTGATGGCAGTCGCCTCTCAGAAAACCAGCACGACTCCCCCAGCGTGTCGT
CGGTTCTTCCGTGCTACATGGGCTGGACTCCGCAGGGTTCTTATGGTCCATATTCCCCCGATGA
ATGCATCTCTTTGCCTGTTTACACAAGTGCTGAGAGGGATTGTGTGGTGACCAACATTGATGTT
CCCTGTGGTGGCAACCAGGACCAGTGGATCCAGTGTGGGGCAGCACTGTTTCTTAAAAATCAGT
AAATCTGAGACAACACAGGAGGACTCAGCAAAGTGACAGTTACTTCAGCGCTCTATGCATAGCA
TGCAGTCAGTCTGCATTTGAAATGTTAGTTCAAGTATCTGCTATGAGTTGTTCTTATTGATGAT
CTCCTTGTGTTTCTATTTTAATAAATGTGTAACACCAAAAAAAAAAACCTGCCCGGG

hide sequence

RefSeq Acc Id:

XM_063266103 ⟹ XP_063122173

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	12,474,145 - 12,689,770 (-)	NCBI

RefSeq Acc Id:

XM_063266104 ⟹ XP_063122174

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	12,474,145 - 12,689,770 (-)	NCBI

RefSeq Acc Id:

XM_063266105 ⟹ XP_063122175

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	12,474,145 - 12,689,770 (-)	NCBI

RefSeq Acc Id:

XM_063266106 ⟹ XP_063122176

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	12,474,145 - 12,697,075 (-)	NCBI

RefSeq Acc Id:

XR_010054024

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	12,519,083 - 12,689,770 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_075413	(Get FASTA)	NCBI Sequence Viewer
	XP_063122173	(Get FASTA)	NCBI Sequence Viewer
	XP_063122174	(Get FASTA)	NCBI Sequence Viewer
	XP_063122175	(Get FASTA)	NCBI Sequence Viewer
	XP_063122176	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC52802	(Get FASTA)	NCBI Sequence Viewer
	BAA05503	(Get FASTA)	NCBI Sequence Viewer
	BAA97048	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000043252
	ENSRNOP00000097714
GenBank Protein	Q9JJ79	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_075413 ⟸ NM_023024

- UniProtKB:

Q9JJ79 (UniProtKB/Swiss-Prot), Q63167 (UniProtKB/Swiss-Prot), P70576 (UniProtKB/Swiss-Prot), D3ZBB8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAGSLSDVRKLFLFTTTQNYFGLRPELWDQTPLSNCPEVNNFLDDGNQMLLRVQRSDAGLAFSN
TIDFDDTKDKVLVFFKLRPEVITDGNLHTNILVSSMLESPINSLYQAVRQVFAPMLLKDQEWSR
NFDPKLQNLLSELEAGLGVVLRKSDTNLPKLKLKEDDTRGILTPSDEFQFWIEQAHRGSKQISK
ERASYFKELFETIAREFYNLDSLSLLEVVDLVETTRDVVDDVWRQAEHDHYPESRMLHLLDVIG
GSFGRFVQKKLGSLKLWEDPYYLVKENLKAGISICEQWVIVCSHLTGQVWQRYVPHPWKSEKYF
PETLDRLGKRLEEVLAIRTIHEKLLYFLPASEERIVCLSRVFEPFTGVNPVQYNPYTEPLWKAA
VSQYEKIIAPAEQKIAGKLKNYISEIQDSPQQLLQAFLKYKELVKRPTISKELMLERETLLARL
GDSAKDFRLDFENRCRGIPGDASGPLSGKNLSEVVNNIVWVRQLELKVDDTIKIAEALLSDLSG
FRSFHRSAEDLLDQFKLYEQEQFDDWSREVQSGLSDSRSGLCIEANSRIMELDPNDGALKVHYS
DRLVILLREVRQLSALGFVIPAKIQQVANVAQKFCKQAIILKQVAHFYNSIDQQMIQSQRPMML
QSALAFEQIIKNSKAGSGGKSQITWDNPKELEGYIQKLQNAAERLATENRRLRKWHITFCEKVV
ILMNIDLLRQQQRWKDGLQELRTGLASVAAQGFQPSDMRAWRQHWNHQLYKALEHQYQMGLEAL
NENLPEINVDLTYKQGRLQFRPPFEEIRAKYYREMKRFIGIPNQFKGVGGAGDESIFSVMIDRN
ASGFLTIYSKAEDLFRRLSAVLHQHKEWVVIGQVDMEALVEKNLSTVHDWEKNFKALKIKGKEV
ERLPSAVKVDCLNINCSPVKTVIDDLIQKLFDLLVLSLKKSIQTHIHEIDTFVTEAMKVLTVIP
QSVEEIGDTNLQYSNLQDRRPEILPLFQEAEDKNRLLRTVAGGGVETVSNLRAKWDKFELMMES
HQLMIKDQIEVMKGNVKSRLQIYYQELDKFKARWDQLKPGDDIIETGQQNTMDQSAKSIKEKKI
EFDDLEVIRKKLVDDCHHFGLEESNFSLAYSISKDIESCAQIWALYEEFQQGLQEMAKEDWITY
RTKIYIFEEFLINWHERLRKVEEHSVMTVKLQSEVDRYKIIIPILKYVRGEHLSPDHWLDLFRL
LGLPRGTSLEKLLFGDLLRVADTIVEKASDLKDLNSRAQGEVTIREALRELDLWGVGAVFSLID
YEDSQNRTIKLIKDWKDIVNQVGDNRCLLQSLKDSPYYKGFEDKVSIWERKLAQLDEYLQNLNH
IQRKWVYLEPIFGRGALPKEQTRFNKVDEDFRSIMMDIRKDSRVTTLTTHAGIRNTLLTILDQL
QRCQKSLNEFLEEKRSAFPRFYFIGDDDLLEILGQSTNPSVIQSHLKKLFAGINSVCFDEESKH
ITAMRSLEGEVVPFKSKVLLSNNVEAWLNDLALEMKQTLKQLLKECVTAGRSSQGAIDPSLFPS
QILCLAEQIKFTEDVEDAIRDHSLHQIEAQLAAKLERYTSVDTSSEDPGNSESGILELKLKTLI
LDIIHNIDIVKQLNQAQVHTTDDWAWKKQVRFYMKSDHTCYVQMVDSELQYTYEYQGNAPKLVY
TPLTDKCYLTLTQAMKMGLGGNPYGPAGTGKTESVKALGGLLGRQVLVFNCDEGIDVKSMGRIF
VGLVKCGAWGCFDEFNRLEEAVLSAVSMQIQTIQDALKNHRSVCELLGKEVEVNANSGIFITMN
PAGKGYGGRQKLPDNLKQLFRPVAMSRPDNDLIAEVILYSEGFKDAKELGRKLVAIFNLSRELL
TPQQHYDWGLRALKTVLRGSGNLLRQLKKSGTKQDVNENHIVVQALRLNTMSKFTFADCTRFDA
LIKDVFPGIDFKEVEYNELSSALKQVFEEANYEVIPNQMKKALELYEQLRQRTGVVIVGPSGAG
KSTLWRMLRAALCKIGKVVKQYTMNPKAMPRHQLLGHIDMDTREWSDGVLTNSARQVVREPQDV
SSWIICDGDIDPEWIESLNSVLDDNRLLTMPSGERIQFGPNVNFVFETHDLSCASPATISRMGM
IFLSDEETDLNSLIKSWLRNQPVEYRSNLENWIGDYFSKALQWVLKQNDYVVETSLVGTVMNGL
SHLHGCKYHDQFIINLIRGLGGNLNMKSRLEFTKEVFNWARETPPDSHRPMDTYFDCDRGQLAS
YVLKKPESLTADDFSSGHSLPVIQTPDMQRGLDYFKPWLSSETKQPFILVGPEGCGKGMLLRYA
FSQLRSTEIATIHCSAQTTSRHLLQKLSQTCMVISTNTGRVYRPKDCERLVLYLKDINLPKLDK
WGTSTLVAFLQQVLTYQGFYDENLEWVGLENIQIVASMSAGGRLGRHKLTTRFTSIVRLCAVDY
PEREQLQTIYGAYLEAVLHKNLKNHSIWGSSSKIYLLAGSMVQVYEQVRAKFTVDDYSHYFFTP
CILTQWVLGLFRYDLEGGSSNHPLDYVLEVVAYEARRLFRDKIVGVKELHLFDNILTSVLQGDW
GSDILDNMADSFYVTWGAQHISGAKIAPGQPLPPHGKPLGKLSSADLKDVIKKGLIHYGRDNQN
LDILLFQEVLEYMSRIDRVLSFPGGSLLLAGRSGVGRRTVTSLVSHMHGAVLFSPKISRGYEPK
QFRTDLKHVLHLAGIEAQQVVLLLEDYQFVHPTFLEMINSLLSSGEVPGLYTLEELEPLLLPLK
DQASQDGFFGPVFNYFTYRIQQNLHIVLIMDSANLNFIINCESNPALHKKCRVLWMEGWSDSSM
KKIPEMLFSEADIEEKYEKKRKDEKKKSSVDPDFIKSFLLIHESCKAYGATPSRYMTFLRVYSA
ISSSKRKELLKRQSHLQAGVSKLNEAKALVDELNRKAGEQSILLRIKQDEADSALQEITVSMQD
ASEQKTELERLKHRIAEEVVKIEERKSKIDDELKEVQPLVNEAKLAVGNIRPESLSEIRSLRMP
PDVIRDILEGVLRLMGIFDTSWVSMKSFLAKRGVREDIATFDARNIPKEIRESVEELLFKNKAS
FDPKNAKRASTAAAPLAAWVKANVQYSHVLERIQPLETEQSGLELNLKKTEDRKRKLEDLLNSV
GQKVSELKEKFQSRTSEAAKLEAEVSKAQETIKAAEVLISQLDREHRRWNAQVAEIAEELATLP
KRAQLAAAFITYLSAAPEGLRKNCLEEWTKAAGLEKFDLRRFLCTESEQLIWKSEGLPSDDLSI
ENALVILQSRVCPFLIDPSSQATEWLKTHLKDSHLEVINQQDSNFITALELAVRFGKTLIIQEM
DGVEPVLYPLLRRDLVAQGPRYVVQIGDKIIDYNEDFRLFLSTRNPNPFIPPDAASIVTEVNFT
TTRSGLRGQLLALTIQHEKPDLEEQKTKLLQQEEDKKIQLARLEESLLETLATSQGNILENKDL
IESLNQTKASSALIQDSLKESYKLQISLDRERDAYLPLAESASKMYFIISDLSKINNMYRFSLA
SFLRLFQRALQNKQDSESTEQRIQCLVNSLKHMVYEYICRCLFKADQLMFALHFVRGMHPEFFQ
ENEWDTFTGVVVGDMLRKADSQQRIRDQLPSWIDQERSWAVATLKISLPGLYQTLCFEDGTLWR
TYYHHSMCEQEFPSILAKKVSLFQQVLVVQALRPDRLQSAMALFACKALGLKELSPLPLNLKRL
YKETLEIEPILIIISPGADPSQELQELANAERSSERYHQVAMGQGQADLAIQMLKECARNGDWL
CLKNLHLVVSWLPVLEKELNTLQPKESFRLWLTAEVHPNFTPILLQSSLKITYESPPGLKKNLM
RTYESWTPEQISKKDNIHRAHALFSLAWFHAACQERRNFIPQGWTKFYEFSLSDLRAGYHVIDR
LFDGSKDVQWEFVHGLLENSIYGGRIDNYFDLRVLQSYLKQFFNSSIIDVLNQRNKKSIFPYSI
SLPDSCSILDYRAVIEKLPEDDKPSFFGLPANIARSSQRMTSSQVISQLRILGRSVTAGCKFDR
EIWSNELSPVLNLWKKLNQNSNLIHQKVSPPNDRQGSPILSFIILEQFNAIRLVQSVHQSLAAL
SKVIRGTTLLSSEVQKLASALLNQKCPLTWQSKWEGPEDPLQYLRGLVARTLAIQNWVEKAEKQ
ALLADTLDLSELFHPDTFLNALRQETARATGCSVDSLKFVASWKGRLQEAKLQIKISGLLLEGC
SFDGSRLSENQHDSPSVSSVLPCYMGWTPQGSYGPYSPDECISLPVYTSAERDCVVTNIDVPCG
GNQDQWIQCGAALFLKNQ

hide sequence

Ensembl Acc Id:

ENSRNOP00000043252 ⟸ ENSRNOT00000044174

Ensembl Acc Id:

ENSRNOP00000097714 ⟸ ENSRNOT00000112659

RefSeq Acc Id:	XP_063122176 ⟸ XM_063266106
- Peptide Label:	isoform X4
- UniProtKB:	Q9JJ79 (UniProtKB/Swiss-Prot), Q63167 (UniProtKB/Swiss-Prot), P70576 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063122174 ⟸ XM_063266104
- Peptide Label:	isoform X2
- UniProtKB:	Q9JJ79 (UniProtKB/Swiss-Prot), Q63167 (UniProtKB/Swiss-Prot), P70576 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063122175 ⟸ XM_063266105
- Peptide Label:	isoform X3
- UniProtKB:	Q9JJ79 (UniProtKB/Swiss-Prot), Q63167 (UniProtKB/Swiss-Prot), P70576 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063122173 ⟸ XM_063266103
- Peptide Label:	isoform X1
- UniProtKB:	Q9JJ79 (UniProtKB/Swiss-Prot), Q63167 (UniProtKB/Swiss-Prot), P70576 (UniProtKB/Swiss-Prot), A0A8I6ANN6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000101717 ⟸ ENSRNOT00000130124

Protein Domains

AAA+ ATPase

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695729

Promoter ID:

EPDNEW_R6253

Type:

initiation region

Name:

Dync2h1_1

Description:

dynein cytoplasmic 2 heavy chain 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	5,429,606 - 5,429,666	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:71042	AgrOrtholog
BioCyc Gene	G2FUF-31795	BioCyc
Ensembl Genes	ENSRNOG00000032070	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000044174	ENTREZGENE
	ENSRNOT00000112659	ENTREZGENE
Gene3D-CATH	1.10.8.1220	UniProtKB/Swiss-Prot
	1.10.8.710	UniProtKB/Swiss-Prot
	1.10.8.720	UniProtKB/Swiss-Prot
	1.20.1270.280	UniProtKB/Swiss-Prot
	1.20.140.100	UniProtKB/Swiss-Prot
	1.20.58.1120	UniProtKB/Swiss-Prot
	1.20.920.20	UniProtKB/Swiss-Prot
	1.20.920.30	UniProtKB/Swiss-Prot
	3.10.490.20	UniProtKB/Swiss-Prot
	3.20.180.20	UniProtKB/Swiss-Prot
	3.40.50.300	UniProtKB/Swiss-Prot
	6.10.140.1060	UniProtKB/Swiss-Prot
InterPro	AAA+_ATPase	UniProtKB/Swiss-Prot
	AAA_6	UniProtKB/Swiss-Prot
	AAA_9	UniProtKB/Swiss-Prot
	AAA_lid_11	UniProtKB/Swiss-Prot
	AAA_lid_11_sf	UniProtKB/Swiss-Prot
	DHC_fam	UniProtKB/Swiss-Prot
	DYNC2H1-like_lid	UniProtKB/Swiss-Prot
	DYNC2H1_AAA_dom	UniProtKB/Swiss-Prot
	Dynein_2_C	UniProtKB/Swiss-Prot
	Dynein_2_N	UniProtKB/Swiss-Prot
	Dynein_AAA1S	UniProtKB/Swiss-Prot
	Dynein_C	UniProtKB/Swiss-Prot
	Dynein_C_barrel	UniProtKB/Swiss-Prot
	Dynein_HC_stalk	UniProtKB/Swiss-Prot
	Dynein_heavy_chain_D4_dom	UniProtKB/Swiss-Prot
	Dynein_heavy_D6_P-loop	UniProtKB/Swiss-Prot
	Dynein_heavy_dom-1	UniProtKB/Swiss-Prot
	Dynein_heavy_dom-2	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
KEGG Report	rno:65209	UniProtKB/Swiss-Prot
NCBI Gene	65209	ENTREZGENE
PANTHER	CYTOPLASMIC DYNEIN 2 HEAVY CHAIN 1	UniProtKB/Swiss-Prot
	MALE FERTILITY FACTOR KL5	UniProtKB/Swiss-Prot
Pfam	AAA_6	UniProtKB/Swiss-Prot
	AAA_7	UniProtKB/Swiss-Prot
	AAA_8	UniProtKB/Swiss-Prot
	AAA_9	UniProtKB/Swiss-Prot
	AAA_lid_11	UniProtKB/Swiss-Prot
	DHC_N1	UniProtKB/Swiss-Prot
	DHC_N2	UniProtKB/Swiss-Prot
	DYN_lid	UniProtKB/Swiss-Prot
	DYNC2H1_AAA_dom	UniProtKB/Swiss-Prot
	Dynein_C	UniProtKB/Swiss-Prot
	Dynein_heavy	UniProtKB/Swiss-Prot
	PF12777	UniProtKB/Swiss-Prot
PhenoGen	Dync2h1	PhenoGen
RatGTEx	ENSRNOG00000032070	RatGTEx
SMART	AAA	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot
UniProt	A0A8I6ANN6	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LEE7_RAT	UniProtKB/TrEMBL
	D3ZBB8	ENTREZGENE, UniProtKB/TrEMBL
	DYHC2_RAT	UniProtKB/Swiss-Prot
	P70576	ENTREZGENE
	Q63167	ENTREZGENE
	Q9JJ79	ENTREZGENE
UniProt Secondary	P70576	UniProtKB/Swiss-Prot
	Q63167	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Dync2h1	dynein cytoplasmic 2 heavy chain 1	LOC103689995	cytoplasmic dynein 2 heavy chain 1-like	Data merged from RGD:9147056	737654	PROVISIONAL
2014-08-25	LOC103689995	cytoplasmic dynein 2 heavy chain 1-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-02-18	Dync2h1	dynein cytoplasmic 2 heavy chain 1	Dnch2	dynein, cytoplasmic, heavy polypeptide 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Dnch2	dynein, cytoplasmic, heavy polypeptide 2		dynein, cytoplasmic, heavy chain 2	Name updated	1299863	APPROVED
2002-07-09	Dnch2	dynein, cytoplasmic, heavy chain 2			Symbol and Name updated to reflect Human and Mouse nomenclature	70877	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expression in adult highest in testis, and also detectable in brain and ovary by Northern blot; expression in neonatal brain highest at birth	632520
gene_transcript	may have splice varients in rat brain	632520

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - OMIM

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