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Gene: Camk1g (calcium/calmodulin-dependent protein kinase IG) Rattus norvegicus

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Symbol:

Camk1g

Name:

calcium/calmodulin-dependent protein kinase IG

RGD ID:

621800

Description:

Enables calcium/calmodulin-dependent protein kinase activity. Predicted to be involved in signal transduction. Predicted to be located in endomembrane system and plasma membrane. Predicted to be part of calcium- and calmodulin-dependent protein kinase complex. Predicted to be active in cytoplasm. Orthologous to human CAMK1G (calcium/calmodulin dependent protein kinase IG); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

calcium/calmodulin-dependent protein kinase I gamma; calcium/calmodulin-dependent protein kinase type 1G; caM kinase I gamma; caM kinase IG; caM-KI gamma; caMK-like CREB kinase III; caMKI gamma; caMKI-gamma; caMKIG; CLICK III

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	107,406,583 - 107,430,332 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	107,406,584 - 107,430,230 (-)	Ensembl				GRCr8
mRatBN7.2	13	104,877,909 - 104,901,658 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	107,395,501 - 107,419,139 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	108,779,366 - 108,803,004 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	105,997,308 - 106,020,952 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	112,075,689 - 112,099,472 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	109,192,833 - 109,216,471 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	104,307,254 - 104,330,886 (-)	NCBI		Celera
RGSC_v3.1	13	109,381,936 - 109,405,575 (-)	NCBI
Cytogenetic Map	13	q27	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amyotrophic lateral sclerosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,4-methylenedioxymethamphetamine (EXP)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

atrazine (EXP,ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

chromium(6+) (ISO)

cobalt dichloride (ISO)

cocaine (ISO)

copper atom (EXP)

copper(0) (EXP)

Cuprizon (EXP)

dimethylarsinic acid (ISO)

ethanol (ISO)

fenvalerate (EXP)

GW 4064 (ISO)

lipopolysaccharide (ISO)

methoxyacetic acid (EXP)

methylarsonic acid (ISO)

permethrin (EXP)

rotenone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

trichloroethene (EXP)

tunicamycin (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium-mediated signaling (NAS)

protein phosphorylation (IDA)

signal transduction (IBA)

Cellular Component

calcium- and calmodulin-dependent protein kinase complex (IEA,ISO)

cytoplasm (IBA,IEA)

endomembrane system (IEA,ISO)

Golgi membrane (IEA)

plasma membrane (IEA,ISO)

Molecular Function

ATP binding (IEA)

calcium/calmodulin-dependent protein kinase activity (IBA,IDA,IEA,ISO)

calmodulin binding (IBA,IEA)

catalytic activity (IEA)

kinase activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IEA)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
4.	Cloning, characterization and expression of two alternatively splicing isoforms of Ca2+/calmodulin-dependent protein kinase I gamma in the rat brain.	Nishimura H, etal., J Neurochem 2003 Jun;85(5):1216-27.
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Isolation and comparison of rat cDNAs encoding Ca2+/calmodulin-dependent protein kinase I isoforms.	Yokokura H, etal., Biochim Biophys Acta 1997 Mar 7;1338(1):8-12.

Additional References at PubMed

PMID:12637513	PMID:19657032

Genomics

Comparative Map Data

Camk1g
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	107,406,583 - 107,430,332 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	107,406,584 - 107,430,230 (-)	Ensembl				GRCr8
mRatBN7.2	13	104,877,909 - 104,901,658 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	107,395,501 - 107,419,139 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	108,779,366 - 108,803,004 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	105,997,308 - 106,020,952 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	112,075,689 - 112,099,472 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	109,192,833 - 109,216,471 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	104,307,254 - 104,330,886 (-)	NCBI		Celera
RGSC_v3.1	13	109,381,936 - 109,405,575 (-)	NCBI
Cytogenetic Map	13	q27	NCBI

CAMK1G
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	209,583,714 - 209,613,939 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	209,583,714 - 209,613,939 (+)	Ensembl			hg38	GRCh38
GRCh37	1	209,757,059 - 209,787,284 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	207,823,668 - 207,853,907 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	206,145,439 - 206,175,678	NCBI
Celera	1	182,987,934 - 183,018,193 (+)	NCBI		Celera
Cytogenetic Map	1	q32.2	NCBI
HuRef	1	180,432,359 - 180,462,572 (+)	NCBI		HuRef
CHM1_1	1	211,029,406 - 211,059,690 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	208,830,506 - 208,860,706 (+)	NCBI		T2T-CHM13v2.0

Camk1g
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	193,028,654 - 193,052,636 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	193,028,654 - 193,052,606 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	193,346,346 - 193,370,355 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	193,346,346 - 193,370,298 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	195,172,540 - 195,196,476 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	195,047,079 - 195,070,954 (-)	NCBI		MGSCv36	mm8
Celera	1	200,223,602 - 200,247,543 (-)	NCBI		Celera
Cytogenetic Map	1	H6	NCBI
cM Map	1	97.74	NCBI

Camk1g
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955489	2,604,030 - 2,629,436 (-)	Ensembl
ChiLan1.0	NW_004955489	2,604,030 - 2,629,394 (-)	NCBI	ChiLan1.0	ChiLan1.0

CAMK1G
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	39,787,224 - 39,817,539 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	39,753,466 - 39,783,781 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	185,160,170 - 185,190,470 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	189,965,450 - 189,995,703 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	189,965,490 - 189,995,703 (+)	Ensembl			panPan2	panpan1.1

CAMK1G
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	8,240,752 - 8,271,116 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	8,240,093 - 8,271,071 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	7,818,261 - 7,848,439 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	7,941,487 - 7,971,834 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	7,941,632 - 7,971,831 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	7,871,478 - 7,901,664 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	7,968,441 - 7,998,797 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	8,029,453 - 8,059,700 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Camk1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	66,248,597 - 66,275,643 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936557	3,489,445 - 3,515,916 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936557	3,488,883 - 3,515,819 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CAMK1G
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	133,351,528 - 133,379,705 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	133,351,523 - 133,380,454 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	146,503,422 - 146,520,739 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CAMK1G
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	19,847,618 - 19,879,376 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	19,848,690 - 19,877,875 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666055	20,447,583 - 20,477,912 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Camk1g
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	2,379,097 - 2,401,205 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624807	2,379,175 - 2,402,263 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Camk1g
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	71,330,143 - 71,353,988 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	537
Count of miRNA genes:	221
Interacting mature miRNAs:	269
Transcripts:	ENSRNOT00000009158, ENSRNOT00000044161
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	65613454	109350286	Rat
7387280	Uae43	Urinary albumin excretion QTL 43	5.69	0.4174	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	68983334	109350286	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	67635937	109350286	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	67635937	109350286	Rat
1576318	Schws5	Schwannoma susceptibility QTL 5		0.0351	nervous system integrity trait (VT:0010566)	post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)	13	64497900	109350286	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	64375743	109350286	Rat
8655951	Rf63	Renal function QTL 63	12.2		blood urea nitrogen amount (VT:0005265)	plasma urea nitrogen level (CMO:0000586)	13	71610804	109350286	Rat
4889606	Gluco63	Glucose level QTL 63	2.86	0.003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	83286150	109350286	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	67635937	109350286	Rat

Markers in Region

D13Got102

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	104,889,451 - 104,889,683 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	112,087,232 - 112,087,463	NCBI	Rnor6.0
Rnor_5.0	13	116,642,848 - 116,643,079	UniSTS	Rnor5.0
RGSC_v3.4	13	109,204,367 - 109,204,598	UniSTS	RGSC3.4
RGSC_v3.4	13	109,204,366 - 109,204,598	RGD	RGSC3.4
Celera	13	104,318,788 - 104,319,013	UniSTS
RGSC_v3.1	13	109,393,471 - 109,393,702	RGD
RH 3.4 Map	13	776.2	UniSTS
RH 3.4 Map	13	776.2	RGD
RH 2.0 Map	13	776.1	RGD
Cytogenetic Map	13	q27	UniSTS

GDB:371676

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	104,901,308 - 104,901,822 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	112,099,089 - 112,099,602	NCBI	Rnor6.0
Rnor_5.0	13	116,654,705 - 116,655,218	UniSTS	Rnor5.0
RGSC_v3.4	13	109,216,224 - 109,216,737	UniSTS	RGSC3.4
Celera	13	104,330,639 - 104,331,152	UniSTS
Cytogenetic Map	13	q27	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
11	6	55	142	57	59	29	41	29	6	230	119	11	119	66	92	30	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001429714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_182842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB101231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB101232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC126166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D86557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009158 ⟹ ENSRNOP00000009158

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	107,406,584 - 107,430,230 (-)	Ensembl
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000044161 ⟹ ENSRNOP00000041124

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	107,406,584 - 107,430,230 (-)	Ensembl
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl

RefSeq Acc Id:

NM_182842 ⟹ NP_878262

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	107,406,592 - 107,430,230 (-)	NCBI
mRatBN7.2	13	104,877,918 - 104,901,556 (-)	NCBI
Rnor_6.0	13	112,075,698 - 112,099,336 (-)	NCBI
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI
RGSC_v3.4	13	109,192,833 - 109,216,471 (-)	RGD
Celera	13	104,307,254 - 104,330,886 (-)	RGD

Sequence:

show sequence

GGCTCGCTGGCCAAGATCACAGACTGGAGCACCTTTCTTGTGAGCCCCTGGCTTCCCAGGCAGC
TTCAACTCTGGAGGACATGGGGCGAAAGGAGGAGGAGGACTGTAGCTCCTGGAAGAAACAGACC
ACCAACATCAGGAAAACCTTCATCTTCATGGAAGTGCTCGGATCAGGAGCGTTCTCAGAGGTGT
TCCTGGTGAAGCAAAGAGTGACTGGGAAACTCTTTGCTCTGAAGTGCATCAAGAAGTCACCAGC
CTTCCGGGACAGTAGCCTAGAGAATGAGATTGCTGTGTTGAAAAGGATCAAGCATGAAAACATT
GTGACCCTGGAGGATATCTATGAGAGCACCACCCACTACTACCTGGTCATGCAGCTTGTTTCTG
GAGGTGAGCTTTTTGACCGAATCCTAGAGCGTGGTGTCTACACAGAAAAGGATGCCAGTCTGGT
CATCCAGCAGGTCTTGTCTGCCGTGAAATACCTTCATGAGAATGGCATCGTTCACAGAGATCTA
AAGCCTGAAAACCTGCTGTACCTCACCCCTGAGGAGAACTCCAAGATAATGATCACTGATTTTG
GCCTATCCAAGATGGAGCAGAATGGAGTCATGTCCACAGCTTGTGGGACCCCAGGCTATGTGGC
TCCAGAAGTGCTGGCCCAGAAGCCCTACAGTAAGGCTGTGGACTGCTGGTCCATTGGTGTCATC
ACATACATACTGCTGTGTGGGTATCCCCCTTTCTATGAAGAAACAGAATCAAAGCTTTTTGAGA
AGATCAAAGAGGGTTACTACGAGTTTGAGTCTCCATTCTGGGATGACATTTCTGAGTCAGCCAA
GGACTTTATTTGCCATCTGCTTGAGAAGGACCCAAATGAACGATACACCTGCGAGAAAGCCCTC
AGACACCCTTGGATTGACGGGAACACAGCCCTGCACCGGGACATCTACCCATCTGTCAGCCTCC
AGATTCAGAAGAACTTTGCCAAGAGCAAGTGGAGGCAAGCCTTCAATGCGGCCGCCGTGGTGCA
CCACATGAGGAAACTACACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAAGTGGAGAACAGG
CCACCTGTGTCCCCTGCTCCCGAAGTCTCCAGACCAGGCTCCCATGACAGCTCCATCACAGAGG
CTCCCATCCTGGACCCAAGCACACCCCTTCCTGCACTGACCCGACTTCCCTGCTCGCATAGCTC
TCGGCCTTCAGCTCCTGGTGGCCGCTCACTCAACTGCCTGGTCAACGGTTCTCTGCGCATCAGC
AGTAGCCTAGTGCCCATGCAACAGGGTCCCCTAGCCACGGGGCCCTGCGGCTGCTGCTCCAGCT
GTCTAAATATAGGGAACAAGGGAAAGTCTTCCTATTGCTCTGAGCCTACCCTCTTCAGAAAAGC
CAACAAAAAACAGAACTTCAAGTCAGAGGTCATGGTACCAGTGAAAGCAGGTGGCAGCACCCAC
TGCCGGGCTGGGCAGACTGGGGTGTGTCTCATAATGTGATCCCAGGAGCCCGTGTGGTTTTTCA
GGAGACACGTCTAGCTCTTCTCTGCCTCTCTAAGCTGGCGTCTGCTCTGAGGAAAGGGAGCAGC
AAAGCAGGGATAGCCGAAGCGGCTGGTCTGAGGCAGTAGGGGTGTTGCTGCCTGGGCAGACACT
CGCAGGAAGTCCAGAGGAGCTCCAATCCTGGACGTTCTCTGAGGCCACAAGCAGGATGTGTGGT
CTGCCTCCAGCATCCCAGCCTCCAGGTCTCCAGACCTGCCCATTCCCTTCCCCACATCCTATGT
GCAGTGGCTCTGTGCAGTGTCCATAGATAGTGCTCATCTGGGTCCGTATTGTTTGTTGTGAAAA
GCTTTATGGGCTGGCCAGGCTGTGCCACTTTCTTCAAGCAAAGCCATATGGAGTCTAACTCAGA
CTCCCTGCTCTGCATACTCACTCCGGCCTCTCTGGCCTCATGGCCAGATTGAACCCGTTATCAT
AGTACCTGCCTATCCGCATGAATGCCAGCCTGCTTCAGGGGCCTGGGAGCACTCACAGCTCTAG
TCCTCCCCTCCAGGATTAGCTTCCCACTGCACTGAGACCCAGGCCACTTCAAAGCTCTCCCTGC
CTCCGCCTAACAGCAGTGCCCCCATTCTCCATGGTGGAACGAGAAAGCTGAGACTATGGACTGT
GAGCCTTCTCTCCCAGCCACACACCTCACATATCCCTAACTAAGGATTCGGGGACTATTTCCAT
GTCGGCCAGGTCTCCTCTGGCTCCTTCCATTCCCCTGAAGGTCAGGTGCATTGTTCTGTCTCTC
TGTGTTCTTACCCTCATACCCTCAAGCTTCGTGCTGTGTTGTGCTCAAATAAAATGGACATAT

hide sequence

RefSeq Acc Id:

XM_006250470 ⟹ XP_006250532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	107,406,583 - 107,430,332 (-)	NCBI
mRatBN7.2	13	104,877,909 - 104,901,658 (-)	NCBI
Rnor_6.0	13	112,075,689 - 112,099,472 (-)	NCBI
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI

Sequence:

show sequence

CACTCTAGCTACTTTTACTCCCCTTTAAGGCTGCCTGGTTACAGTCCTGGGAAAGAAAACCCCT
GTATTCCTCCCCTTTAATTGGGTTTATTGTTAAAGCACTGGGGCAGCTAATCCTCACAGACCTG
TAGGAGCAGGCTCGCTGGCCAAGATCACAGACTGGAGCACCTTTCTTGTGAGCCCCTGGCTTCC
CAGGCAGCTTCAACTCTGGAGGACATGGGGCGAAAGGAGGAGGAGGACTGTAGCTCCTGGAAGA
AACAGACCACCAACATCAGGAAAACCTTCATCTTCATGGAAGTGCTCGGATCAGGAGCGTTCTC
AGAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAAACTCTTTGCTCTGAAGTGCATCAAGAAG
TCACCAGCCTTCCGGGACAGTAGCCTAGAGAATGAGATTGCTGTGTTGAAAAGGATCAAGCATG
AAAACATTGTGACCCTGGAGGATATCTATGAGAGCACCACCCACTACTACCTGGTCATGCAGCT
TGTTTCTGGAGGTGAGCTTTTTGACCGAATCCTAGAGCGTGGTGTCTACACAGAAAAGGATGCC
AGTCTGGTCATCCAGCAGGTCTTGTCTGCCGTGAAATACCTTCATGAGAATGGCATCGTTCACA
GAGATCTAAAGCCTGAAAACCTGCTGTACCTCACCCCTGAGGAGAACTCCAAGATAATGATCAC
TGATTTTGGCCTATCCAAGATGGAGCAGAATGGAGTCATGTCCACAGCTTGTGGGACCCCAGGC
TATGTGGCTCCAGAAGTGCTGGCCCAGAAGCCCTACAGTAAGGCTGTGGACTGCTGGTCCATTG
GTGTCATCACATACATACTGCTGTGTGGGTATCCCCCTTTCTATGAAGAAACAGAATCAAAGCT
TTTTGAGAAGATCAAAGAGGGTTACTACGAGTTTGAGTCTCCATTCTGGGATGACATTTCTGAG
TCAGCCAAGGACTTTATTTGCCATCTGCTTGAGAAGGACCCAAATGAACGATACACCTGCGAGA
AAGCCCTCAGACACCCTTGGATTGACGGGAACACAGCCCTGCACCGGGACATCTACCCATCTGT
CAGCCTCCAGATTCAGAAGAACTTTGCCAAGAGCAAGTGGAGGGAACTTCAAGTCAGAGGTCAT
GGTACCAGTGAAAGCAGGTGGCAGCACCCACTGCCGGGCTGGGCAGACTGGGGTGTGTCTCATA
ATGTGATCCCAGGAGCCCGTGTGGTTTTTCAGGAGACACGTCTAGCTCTTCTCTGCCTCTCTAA
GCTGGCGTCTGCTCTGAGGAAAGGGAGCAGCAAAGCAGGGATAGCCGAAGCGGCTGGTCTGAGG
CAGTAGGGGTGTTGCTGCCTGGGCAGACACTCGCAGGAAGTCCAGAGGAGCTCCAATCCTGGAC
GTTCTCTGAGGCCACAAGCAGGATGTGTGGTCTGCCTCCAGCATCCCAGCCTCCAGGTCTCCAG
ACCTGCCCATTCCCTTCCCCACATCCTATGTGCAGTGGCTCTGTGCAGTGTCCATAGATAGTGC
TCATCTGGGTCCGTATTGTTTGTTGTGAAAAGCTTTATGGGCTGGCCAGGCTGTGCCACTTTCT
TCAAGCAAAGCCATATGGAGTCTAACTCAGACTCCCTGCTCTGCATACTCACTCCGGCCTCTCT
GGCCTCATGGCCAGATTGAACCCGTTATCATAGTACCTGCCTATCCGCATGAATGCCAGCCTGC
TTCAGGGGCCTGGGAGCACTCACAGCTCTAGTCCTCCCCTCCAGGATTAGCTTCCCACTGCACT
GAGACCCAGGCCACTTCAAAGCTCTCCCTGCCTCCGCCTAACAGCAGTGCCCCCATTCTCCATG
GTGGAACGAGAAAGCTGAGACTATGGACTGTGAGCCTTCTCTCCCAGCCACACACCTCACATAT
CCCTAACTAAGGATTCGGGGACTATTTCCATGTCGGCCAGGTCTCCTCTGGCTCCTTCCATTCC
CCTGAAGGTCAGGTGCATTGTTCTGTCTCTCTGTGTTCTTACCCTCATACCCTCAAGCTTCGTG
CTGTGTTGTGCTCAAATAAAATGGACATATTTTTCTCTA

hide sequence

RefSeq Acc Id:

XM_063271992 ⟹ XP_063128062

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	107,407,547 - 107,430,332 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001416643	(Get FASTA)	NCBI Sequence Viewer
	NP_878262	(Get FASTA)	NCBI Sequence Viewer
	XP_006250532	(Get FASTA)	NCBI Sequence Viewer
	XP_063128062	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA19880	(Get FASTA)	NCBI Sequence Viewer
	BAC80242	(Get FASTA)	NCBI Sequence Viewer
	BAC80243	(Get FASTA)	NCBI Sequence Viewer
	EDL95037	(Get FASTA)	NCBI Sequence Viewer
	EDL95038	(Get FASTA)	NCBI Sequence Viewer
	EDL95039	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009158
	ENSRNOP00000009158.3
	ENSRNOP00000041124
	ENSRNOP00000041124.2
GenBank Protein	Q7TNJ7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_878262 ⟸ NM_182842

- UniProtKB:

O08763 (UniProtKB/Swiss-Prot), Q7TNJ6 (UniProtKB/Swiss-Prot), Q7TNJ7 (UniProtKB/Swiss-Prot), A6JH32 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGRKEEEDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSS
LENEIAVLKRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL
SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGVMSTACGTPGYVAPEVLA
QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH
LLEKDPNERYTCEKALRHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHHMRKL
HMNLHSPSVRQEVENRPPVSPAPEVSRPGSHDSSITEAPILDPSTPLPALTRLPCSHSSRPSAP
GGRSLNCLVNGSLRISSSLVPMQQGPLATGPCGCCSSCLNIGNKGKSSYCSEPTLFRKANKKQN
FKSEVMVPVKAGGSTHCRAGQTGVCLIM

hide sequence

RefSeq Acc Id:

XP_006250532 ⟸ XM_006250470

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGRKEEEDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSS
LENEIAVLKRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL
SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGVMSTACGTPGYVAPEVLA
QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH
LLEKDPNERYTCEKALRHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRELQVRGHGTSESRWQ
HPLPGWADWGVSHNVIPGARVVFQETRLALLCLSKLASALRKGSSKAGIAEAAGLRQ

hide sequence

Ensembl Acc Id:

ENSRNOP00000009158 ⟸ ENSRNOT00000009158

Ensembl Acc Id:

ENSRNOP00000041124 ⟸ ENSRNOT00000044161

RefSeq Acc Id:	XP_063128062 ⟸ XM_063271992
- Peptide Label:	isoform X1
- UniProtKB:	Q7TNJ7 (UniProtKB/Swiss-Prot), Q7TNJ6 (UniProtKB/Swiss-Prot), O08763 (UniProtKB/Swiss-Prot), A6JH32 (UniProtKB/TrEMBL)

Protein Domains

Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q7TNJ7-F1-model_v2	AlphaFold	Q7TNJ7	1-476	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621800	AgrOrtholog
BioCyc Gene	G2FUF-16783	BioCyc
Ensembl Genes	ENSRNOG00000006470	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000009158	ENTREZGENE
	ENSRNOT00000009158.7	UniProtKB/Swiss-Prot
	ENSRNOT00000044161	ENTREZGENE
	ENSRNOT00000044161.3	UniProtKB/Swiss-Prot
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
InterPro	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot
KEGG Report	rno:171358	UniProtKB/Swiss-Prot
NCBI Gene	171358	ENTREZGENE
PANTHER	SERINE/THREONINE-PROTEIN KINASE	UniProtKB/Swiss-Prot
Pfam	Pkinase	UniProtKB/Swiss-Prot
PhenoGen	Camk1g	PhenoGen
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000006470	RatGTEx
SMART	S_TKc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot
UniProt	A6JH31	ENTREZGENE, UniProtKB/TrEMBL
	A6JH32	ENTREZGENE, UniProtKB/TrEMBL
	A6JH33_RAT	UniProtKB/TrEMBL
	KCC1G_RAT	UniProtKB/Swiss-Prot
	O08763	ENTREZGENE
	Q7TNJ6	ENTREZGENE
	Q7TNJ7	ENTREZGENE
UniProt Secondary	O08763	UniProtKB/Swiss-Prot
	Q7TNJ6	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-24	Camk1g	calcium/calmodulin-dependent protein kinase IG	Camk1g	calcium/calmodulin-dependent protein kinase I gamma	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-12-14	Camk1g	calcium/calmodulin-dependent protein kinase I gamma		calcium/calmodulin-dependent protein kinase IG	Name updated	1299863	APPROVED
2002-08-07	Camk1g	calcium/calmodulin-dependent protein kinase IG			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in the olfactory bulb, hippocampal pyramidal cell layer of CA3, central amygdaloid nuclei, ventromedial hypothalamic nucleus and pineal gland of the brain	68749
gene_transcript	consists of two alternatively splicing isoforms termed CaMKI gamma 1 and -gamma 2	68749

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD