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Gene: Cntn1 (contactin 1) Rattus norvegicus

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Symbol:

Cntn1

Name:

contactin 1

RGD ID:

621300

Description:

Predicted to enable carbohydrate binding activity and cell-cell adhesion mediator activity. Predicted to be involved in cell-cell adhesion; locomotory behavior; and nervous system development. Predicted to act upstream of or within several processes, including nervous system development; positive regulation of neuron projection development; and positive regulation of sodium ion transport. Predicted to be located in side of membrane. Predicted to be active in axon; glutamatergic synapse; and synaptic membrane. Human ortholog(s) of this gene implicated in Compton-North congenital myopathy. Orthologous to human CNTN1 (contactin 1); PARTICIPATES IN Notch signaling pathway; INTERACTS WITH ammonium chloride; bisphenol A; Brodifacoum.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

contactin-1; F3; neural cell surface protein F3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CNTN1 (contactin 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Cntn1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cntn1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CNTN1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CNTN1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cntn1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CNTN1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CNTN1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cntn1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cntn1 (contactin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	IL22RA2 (interleukin 22 receptor subunit alpha 2)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	CNTN1 (contactin 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cntn1 (contactin 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cntn1a (contactin 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cntn1b (contactin 1b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Cont	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rig-6	Alliance	DIOPT (OMA\|OrthoFinder)
Xenopus tropicalis (tropical clawed frog):	cntn1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cntn1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	125,142,638 - 125,440,397 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	125,142,696 - 125,440,391 (+)	Ensembl				GRCr8
mRatBN7.2	7	123,263,146 - 123,560,896 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	123,372,792 - 123,558,541 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	125,146,295 - 125,332,781 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	127,372,157 - 127,558,628 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	127,293,669 - 127,480,412 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	133,290,606 - 133,588,314 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	133,400,485 - 133,586,677 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	132,976,416 - 133,272,747 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	130,658,836 - 130,845,071 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	119,777,077 - 119,962,153 (+)	NCBI		Celera
RGSC_v3.1	7	130,735,272 - 130,921,508 (+)	NCBI
Cytogenetic Map	7	q35	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Ataxia (ISO)

Compton-North congenital myopathy (ISO,ISS)

genetic disease (ISO)

Hearing Loss, Noise-Induced (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-nicotine (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,4-diaminotoluene (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2-hydroxypropanoic acid (ISO)

2-palmitoylglycerol (ISO)

3',5'-cyclic AMP (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one (ISO)

5-aza-2'-deoxycytidine (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

antimycin A (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

asbestos (ISO)

atrazine (ISO)

Azoxymethane (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

Brodifacoum (EXP)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

clofibrate (ISO)

Cuprizon (EXP)

deguelin (ISO)

dexamethasone (EXP)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

diethyl maleate (ISO)

diquat (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

entinostat (ISO)

ethanol (ISO)

fenpyroximate (ISO)

folic acid (ISO)

gentamycin (EXP)

ivermectin (ISO)

L-ascorbic acid (ISO)

lead(0) (ISO)

Mecamylamine (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

nickel atom (ISO)

nicotine (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

pirinixic acid (ISO)

poly(I:C) (EXP)

progesterone (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

rotenone (EXP,ISO)

SB 431542 (ISO)

silicon dioxide (EXP,ISO)

sodium arsenite (EXP,ISO)

sunitinib (ISO)

tebufenpyrad (ISO)

temozolomide (ISO)

testosterone (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

trimellitic anhydride (ISO)

tubocurarine (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon guidance (IBA)

brain development (IBA)

cell adhesion (IEA)

cell-cell adhesion (IBA)

central nervous system myelin formation (IEA,ISO)

cerebellum development (ISO)

locomotory behavior (IEA,ISO)

myelination (IEA,ISO)

neuron projection development (ISO)

Notch signaling pathway (IEA)

positive regulation of gene expression (ISO)

positive regulation of neuron projection development (ISO)

positive regulation of peptidyl-tyrosine phosphorylation (IMP)

positive regulation of sodium ion transport (ISO)

Cellular Component

axon (IBA)

glutamatergic synapse (IEA,ISO)

membrane (IEA)

plasma membrane (IBA,IEA,TAS)

postsynaptic membrane (IEA,ISO)

presynaptic membrane (IEA,ISO)

side of membrane (IEA)

synapse (IEA,ISO)

Molecular Function

carbohydrate binding (IEA,ISO)

cell-cell adhesion mediator activity (IBA)

protein binding (IPI,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Notch signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Molecular cloning and in situ localization of the human contactin gene (CNTN1) on chromosome 12q11-q12.	Berglund EO and Ranscht B, Genomics 1994 Jun;21(3):571-82.
2.	Ataxia and abnormal cerebellar microorganization in mice with ablated contactin gene expression.	Berglund EO, etal., Neuron 1999 Nov;24(3):739-50.
3.	Transcriptional changes in adhesion-related genes are site-specific during noise-induced cochlear pathogenesis.	Cai Q, etal., Neurobiol Dis. 2012 Feb;45(2):723-32. Epub 2011 Oct 25.
4.	Regulatory mechanisms that mediate tenascin C-dependent inhibition of oligodendrocyte precursor differentiation.	Czopka T, etal., J Neurosci. 2010 Sep 15;30(37):12310-22.
5.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
7.	Developmental expression of the neural adhesion molecule F3 in the rat brain.	Hosoya H, etal., Neurosci Lett 1995 Feb 17;186(2-3):83-6.
8.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
9.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
10.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
11.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
12.	Juxtaparanodal clustering of Shaker-like K+ channels in myelinated axons depends on Caspr2 and TAG-1.	Poliak S, etal., J Cell Biol. 2003 Sep 15;162(6):1149-60. Epub 2003 Sep 8.
13.	GOA pipeline	RGD automated data pipeline
14.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
16.	Soluble forms of NCAM and F3 neuronal cell adhesion molecules promote Schwann cell migration: identification of protein tyrosine phosphatases zeta/beta as the putative F3 receptors on Schwann cells.	Thomaidou D, etal., J Neurochem. 2001 Aug;78(4):767-78.

Additional References at PubMed

PMID:1729438	PMID:7628014	PMID:9081628	PMID:9118959	PMID:15967539	PMID:16029194	PMID:17634366	PMID:18354028	PMID:19026398	PMID:19458237	PMID:20451518	PMID:23376485
PMID:23533145	PMID:29476059

Genomics

Comparative Map Data

Cntn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	125,142,638 - 125,440,397 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	125,142,696 - 125,440,391 (+)	Ensembl				GRCr8
mRatBN7.2	7	123,263,146 - 123,560,896 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	123,372,792 - 123,558,541 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	125,146,295 - 125,332,781 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	127,372,157 - 127,558,628 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	127,293,669 - 127,480,412 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	133,290,606 - 133,588,314 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	133,400,485 - 133,586,677 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	132,976,416 - 133,272,747 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	130,658,836 - 130,845,071 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	119,777,077 - 119,962,153 (+)	NCBI		Celera
RGSC_v3.1	7	130,735,272 - 130,921,508 (+)	NCBI
Cytogenetic Map	7	q35	NCBI

CNTN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	40,692,439 - 41,072,415 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	40,692,431 - 41,072,415 (+)	Ensembl			hg38	GRCh38
GRCh37	12	41,086,241 - 41,466,217 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	39,372,625 - 39,750,361 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	12	39,372,624 - 39,750,361	NCBI
Celera	12	39,889,695 - 40,267,406 (+)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI
HuRef	12	38,112,937 - 38,492,512 (+)	NCBI		HuRef
CHM1_1	12	41,051,536 - 41,431,091 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	40,652,132 - 41,031,590 (+)	NCBI		T2T-CHM13v2.0

Cntn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	91,949,034 - 92,239,834 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	91,949,046 - 92,239,848 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	92,051,152 - 92,341,967 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	92,051,165 - 92,341,967 (+)	Ensembl			mm10	GRCm38
MGSCv37	15	91,881,596 - 92,172,398 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	91,956,372 - 92,168,291 (+)	NCBI		MGSCv36	mm8
Celera	15	94,177,246 - 94,486,845 (+)	NCBI		Celera
Cytogenetic Map	15	E3	NCBI
cM Map	15	46.39	NCBI

Cntn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955500	245,896 - 540,600 (+)	Ensembl
ChiLan1.0	NW_004955500	154,704 - 540,546 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNTN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	53,073,079 - 53,457,589 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	53,069,840 - 53,454,351 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	47,630,295 - 48,014,766 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	48,492,558 - 48,877,396 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	48,492,564 - 48,670,126 (-)	Ensembl			panPan2	panpan1.1

CNTN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	12,655,021 - 13,005,536 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	12,657,287 - 12,920,315 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	33,445,834 - 33,709,949 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	12,856,273 - 13,206,411 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	12,856,279 - 13,206,379 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	12,671,345 - 12,901,312 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	12,704,418 - 13,054,458 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	33,541,381 - 33,890,677 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cntn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	73,184,782 - 73,458,579 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936607	23,150 - 292,013 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936607	8,430 - 291,964 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNTN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	72,168,511 - 72,495,633 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	72,168,496 - 72,495,454 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	75,140,748 - 75,389,289 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CNTN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	36,950,020 - 37,332,058 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	37,167,079 - 37,333,314 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	209,407,722 - 209,806,565 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cntn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624917	471,837 - 750,245 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624917	292,404 - 752,017 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cntn1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	265,059,033 - 265,350,082 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cntn1
2511 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	115
Count of miRNA genes:	93
Interacting mature miRNAs:	100
Transcripts:	ENSRNOT00000006219
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631529	Tls2	T-lymphoma susceptibility QTL 2	0	0.001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	7	82111382	132099989	Rat
1354582	Stl11	Serum triglyceride level QTL 11	3.42		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	121393075	137014596	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	98549867	137014596	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	119280025	135560836	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	104186212	135371468	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	93302009	131686183	Rat
1331748	Bp215	Blood pressure QTL 215	4.043		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	110725024	135371468	Rat
61428	Scl3	Serum cholesterol level QTL 3	3.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	100548246	137014596	Rat
61397	Bw17	Body weight QTL 17	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	7	95485047	137014596	Rat
1331746	Kidm9	Kidney mass QTL 9	3.934		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	7	82111245	134948181	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	115313999	136544683	Rat
2299163	Iddm34	Insulin dependent diabetes mellitus QTL 34	2.71		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	7	116269196	132020414	Rat
1582240	Sffal1	Serum free fatty acids level QTL 1	3.4	0.0021	blood free fatty acid amount (VT:0001553)	serum free fatty acids level (CMO:0000547)	7	118556868	125929417	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	85043242	130043242	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	85497398	130497398	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	92362341	137014596	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	83626689	128626689	Rat

Markers in Region

D7Got118

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	123,408,244 - 123,408,521 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	133,435,313 - 133,435,589	NCBI	Rnor6.0
Rnor_5.0	7	133,119,880 - 133,120,156	UniSTS	Rnor5.0
RGSC_v3.4	7	130,694,295 - 130,694,572	RGD	RGSC3.4
RGSC_v3.4	7	130,694,296 - 130,694,572	UniSTS	RGSC3.4
Celera	7	119,812,135 - 119,812,405	UniSTS
RGSC_v3.1	7	130,770,733 - 130,771,009	RGD
RH 3.4 Map	7	1020.3	UniSTS
RH 3.4 Map	7	1020.3	RGD
RH 2.0 Map	7	745.3	RGD
Cytogenetic Map	7	q35	UniSTS

Cntn1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	7	125,438,333 - 125,438,491 (+)	Marker Load Pipeline
mRatBN7.2	7	123,558,833 - 123,558,990 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	133,586,252 - 133,586,408	NCBI	Rnor6.0
Rnor_5.0	7	133,270,685 - 133,270,841	UniSTS	Rnor5.0
RGSC_v3.4	7	130,845,364 - 130,845,520	UniSTS	RGSC3.4
Celera	7	119,962,446 - 119,962,602	UniSTS
Cytogenetic Map	7	q35	UniSTS

BF415915

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	123,498,537 - 123,498,674 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	133,526,038 - 133,526,174	NCBI	Rnor6.0
Rnor_5.0	7	133,210,471 - 133,210,607	UniSTS	Rnor5.0
RGSC_v3.4	7	130,783,937 - 130,784,073	UniSTS	RGSC3.4
Celera	7	119,902,121 - 119,902,257	UniSTS
RH 3.4 Map	7	1009.8	UniSTS
Cytogenetic Map	7	q35	UniSTS

AU048466

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	123,408,225 - 123,408,497 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	133,435,294 - 133,435,565	NCBI	Rnor6.0
Rnor_5.0	7	133,119,861 - 133,120,132	UniSTS	Rnor5.0
RGSC_v3.4	7	130,694,277 - 130,694,548	UniSTS	RGSC3.4
Celera	7	119,812,116 - 119,812,381	UniSTS
Cytogenetic Map	7	q35	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	66	165	89	88	57	58	57	6	310	157	11	140	72	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001439869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001439872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_057118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063262908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AJ877233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ877234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ877235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ877236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ877237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D38492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006219 ⟹ ENSRNOP00000006219

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	125,320,861 - 125,408,809 (+)	Ensembl
mRatBN7.2 Ensembl	7	123,372,792 - 123,558,541 (+)	Ensembl
Rnor_6.0 Ensembl	7	133,400,485 - 133,585,959 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000080621 ⟹ ENSRNOP00000071355

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	123,441,350 - 123,529,306 (+)	Ensembl
Rnor_6.0 Ensembl	7	133,457,255 - 133,586,677 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000120797 ⟹ ENSRNOP00000098410

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	125,142,696 - 125,440,391 (+)	Ensembl

RefSeq Acc Id:

NM_057118 ⟹ NP_476459

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,252,310 - 125,438,042 (+)	NCBI
mRatBN7.2	7	123,372,792 - 123,558,541 (+)	NCBI
Rnor_6.0	7	133,400,485 - 133,585,959 (+)	NCBI
Rnor_5.0	7	132,976,416 - 133,272,747 (+)	NCBI
RGSC_v3.4	7	130,658,836 - 130,845,071 (+)	RGD
Celera	7	119,777,077 - 119,962,153 (+)	RGD

Sequence:

show sequence

CAAAGGGGCAATTTGAAGCAGATATTATACCGAGACCGGCAGATGATTCAACACATACGGTCTT
TCATAGTTGTCAACTGCCATAAAGCTCCCATTCCTTCTGGAAACTGACCCATCTATTCAACAGA
AGATGAAAACCCCATTGCTGGTCAGTCATCTCCTGCTAATCTCCTTAACATCCTGTCTAGGAGA
GTTTACATGGCACAGAAGATATGGTCATGGAGTTTCTGAGGAGGATAAAGGATTTGGACCCATT
TTTGAAGAGCAACCAATCAATACCATTTACCCAGAAGAGTCACTGGAAGGCAAAGTGTCGCTCA
ACTGCCGGGCACGGGCAAGCCCATTTCCGGTTTACAAGTGGAGAATGAATAACGGGGACGTTGA
CCTGACGAACGATCGATACAGCATGGTCGGAGGGAACCTTGTTATCAATAACCCTGACAAACAG
AAAGACGCAGGAATATACTACTGCTTGGCGTCCAACAACTACGGGATGGTCAGAAGCACCGAGG
CCACCCTGAGCTTTGGGTATCTTGACCCCTTTCCTCCTGAGGATCGTCCTGAAGTGAAGGTGAA
GGAAGGGAAGGGCATGGTGCTTCTCTGCGACCCTCCCTACCACTTCCCAGACGATCTTAGCTAC
CGCTGGCTTCTGAATGAATTTCCCGTCTTTATCACAATGGATAAGCGAAGATTCGTGTCTCAGA
CCAACGGTAATCTCTACATCGCGAACGTTGAGTCTTCTGATAGAGGCAACTATTCCTGCTTCGT
GTCCAGCCCTTCTATTACAAAGAGCGTGTTCAGCAAATTTATACCCCTCATTCCGATACCTGAG
CGAACAACGAAGCCATATCCTGCTGACATTGTAGTGCAGTTCAAGGACATATACACCATGATGG
GCCAAAATGTGACCTTAGAGTGCTTCGCTCTTGGAAACCCTGTTCCTGATATTCGGTGGCGGAA
GGTGCTAGAACCCATGCCTACCACAGCTGAGATCAGCACCTCAGGGGCTGTCCTCAAGATCTTC
AACATCCAGCTAGAAGATGAAGGGCTCTACGAGTGCGAGGCTGAGAACATTAGGGGAAAGGACA
AGCACCAGGCAAGAATTTATGTTCAAGCATTTCCTGAATGGGTAGAGCATATCAATGACACTGA
AGTGGACATAGGCAGTGACCTCTACTGGCCTTGTGTGGCCACAGGGAAGCCCATCCCTACCATC
AGGTGGCTGAAAAATGGGTACGCGTATCACAAAGGGGAACTGAGGCTGTATGACGTGACTTTTG
AAAACGCCGGGATGTACCAGTGCATAGCAGAAAACGCGTATGGGACCATTTATGCAAATGCTGA
ACTCAAGATCCTGGCTTTAGCTCCAACTTTTGAAATGAATCCCATGAAGAAGAAGATCCTGGCT
GCGAAAGGAGGAAGGGTTATCATTGAGTGCAAACCCAAGGCTGCACCAAAACCCAAGTTTTCAT
GGAGCAAAGGGACAGAGTGGCTTGTCAACAGCAGCAGAATACTCATATGGGAAGATGGTAGCTT
GGAAATCAATAATATTACAAGAAATGATGGAGGAATCTATACATGCTTTGCAGAAAACAACAGA
GGGAAAGCTAATAGCACCGGGACTCTGGTGATCACAAATCCCACACGAATCATTTTGGCCCCAA
TCAATGCTGATATCACTGTTGGAGAAAACGCTACCATGCAGTGTGCTGCCTCCTTTGATCCTTC
CTTGGATCTCACGTTCGTCTGGTCTTTCAATGGCTACGTGATTGACTTTAACAAGGAAATTACA
AATATTCATTACCAGAGGAATTTTATGCTCGACGCCAATGGGGAACTGCTCATCCGAAACGCGC
AGCTGAAACACGCAGGACGGTACACGTGCACAGCGCAGACAATCGTGGACAATTCTTCAGCTTC
AGCTGACCTTGTCGTACGAGGCCCCCCAGGCCCTCCAGGTGGCCTGAGAATAGAAGACATCAGA
GCTACCTCTGTGGCACTGACTTGGAGCCGTGGTTCAGACAATCACAGCCCTATCTCTAAATACA
CTATCCAGACCAAGACGATTCTCTCAGATGACTGGAAAGACGCAAAGACGGATCCCCCAATCAT
TGAAGGAAACATGGAGTCAGCAAAAGCAGTCGATTTGATCCCATGGATGGAGTACGAATTTCGA
GTGGTAGCAACCAATACTTTGGGGACTGGAGAGCCCAGCATACCCTCAAACAGGATCAAAACCG
ATGGCGCTGCACCAAATGTGGCTCCCTCAGACGTAGGTGGTGGGGGCGGAACCAACAGAGAGCT
GACAATAACGTGGGCGCCTTTGTCCAGAGAATACCATTATGGTAACAATTTTGGTTACATAGTG
GCATTCAAGCCATTCGATGGAGAAGAGTGGAAGAAAGTGACCGTTACCAATCCGGATACTGGCC
GCTACGTCCACAAGGACGAAACCATGACCCCTTCCACCGCGTTTCAAGTCAAAGTGAAGGCATT
CAACAATAAAGGAGACGGGCCCTACAGCCTCATAGCTGTCATCAACTCAGCACAAGACGCTCCC
AGTGAAGCCCCCACAGAAGTAGGGGTCAAAGTGCTATCGTCCTCTGAGATCTCTGTCCATTGGA
AGCACGTTCTAGAGAAGATTGTGGAAAGCTATCAAATTCGGTACTGGGCCGGTCACGACAAAGA
AGCAGCGGCGCACAGAGTTCAAGTCACCAGCCAGGAGTACTCAGCCAGGCTGGAGAACCTTCTG
CCGGACACTCAGTACTTCATAGAGGTGGGAGCCTGTAACAGCGCGGGGTGCGGACCTTCCAGCG
ACGTGATCGAGACCTTCACCAGAAAAGCCCCTCCCAGCCAACCACCAAGGATCATCAGTTCCGT
GAGGTCTGGCTCCCGATACATAATCACGTGGGATCATGTCGTGGCACTATCCAATGAATCTACA
GTGACAGGCTACAAGATACTCTATAGACCTGACGGCCAACATGACGGTAAGCTGTTCTCCACGC
ACAAGCACTCCATAGAAGTCCCCATCCCCAGAGACGGAGAGTACGTAGTCGAAGTTCGAGCACA
CAGTGATGGAGGAGATGGGGTAGTGTCCCAAGTCAAAATTTCAGGTGTGTCCACGCTGTCATCG
GGTCTCCTCAGCTTGCTCCTGCCCTCCCTTGGCTTTCTTGTCTTCTATTCGGAATTCTGAACGT
TGTGACATTT

hide sequence

RefSeq Acc Id:

XM_006242177 ⟹ XP_006242239

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,251,891 - 125,440,397 (+)	NCBI
mRatBN7.2	7	123,404,063 - 123,560,896 (+)	NCBI
Rnor_6.0	7	133,399,891 - 133,588,314 (+)	NCBI
Rnor_5.0	7	132,976,416 - 133,272,747 (+)	NCBI

Sequence:

show sequence

TTCGACATTCTGCAGCTTGCGGATGTCATTTCGGCTCTGAGAATGTCTTCCCCGAGAGGCTGCA
GTCGGGCTGGAGACTTCTGCCTATGATTTAGGTTGTGATTTTATTTGTGGAAATAAACCAATCA
GGGCTCTCCGATTGTCTTAGGGATGAGGTGATCAATAGCCCATTACTGGGTAGAGCCCAGGCTA
CAGGAAGTGCATTGAAGATTCCAATGCATGAATTATGCATGCCCTGCTCATTCTTTAGTCCCTG
AACAGAATGACAGGGTTTGTGAAGTCGCCTCAGATAGTTTTTTGCATTAAGCGACTGCAGTGAA
ATGCTTAATATTTTCAGGCAACAGAAGCAGCATTGACTCCAGCCCGCCAGGTTCGGGGATGTAA
ATCCACAGCTCACAGCCCAGAATGCTTCATTTGAAAGTATTGCTATGTAGAGAGCCAGCTTTGC
AGTCTCCCAACCTGTTCTTTGCAGAAGGTTGTCTGAAGGATGGGAGCGGCTGTGCCTGCCTCTG
AGGTCACAGCTTGAGGTCTTTTTAACTTGCCTTCTGCTGCAGAAGAGAGGCTGATTGTGTCATA
ACTCTCCCTGAGTCTATTCAAAGGGGCAATTTGAAGCAGATATTATACCGAGACCGGCAGATGA
TTCAACACATACGGTGCCTGTGGAGGCCAGAGGATATCAGATTCCCCTAGAAACTTGGGCTACA
AGTGGTCCTGGGTCACATGAGGTCTTTCATAGTTGTCAACTGCCATAAAGCTCCCATTCCTTCT
GGAAACTGACCCATCTATTCAACAGAAGATGAAAACCCCATTGCTGGTCAGTCATCTCCTGCTA
ATCTCCTTAACATCCTGTCTAGGAGAGTTTACATGGCACAGAAGATATGGTCATGGAGTTTCTG
AGGAGGATAAAGGATTTGGACCCATTTTTGAAGAGCAACCAATCAATACCATTTACCCAGAAGA
GTCACTGGAAGGCAAAGTGTCGCTCAACTGCCGGGCACGGGCAAGCCCATTTCCGGTTTACAAG
TGGAGAATGAATAACGGGGACGTTGACCTGACGAACGATCGATACAGCATGGTCGGAGGGAACC
TTGTTATCAATAACCCTGACAAACAGAAAGACGCAGGAATATACTACTGCTTGGCGTCCAACAA
CTACGGGATGGTCAGAAGCACCGAGGCCACCCTGAGCTTTGGGTATCTTGACCCCTTTCCTCCT
GAGGATCGTCCTGAAGTGAAGGTGAAGGAAGGGAAGGGCATGGTGCTTCTCTGCGACCCTCCCT
ACCACTTCCCAGACGATCTTAGCTACCGCTGGCTTCTGAATGAATTTCCCGTCTTTATCACAAT
GGATAAGCGAAGATTCGTGTCTCAGACCAACGGTAATCTCTACATCGCGAACGTTGAGTCTTCT
GATAGAGGCAACTATTCCTGCTTCGTGTCCAGCCCTTCTATTACAAAGAGCGTGTTCAGCAAAT
TTATACCCCTCATTCCGATACCTGAGCGAACAACGAAGCCATATCCTGCTGACATTGTAGTGCA
GTTCAAGGACATATACACCATGATGGGCCAAAATGTGACCTTAGAGTGCTTCGCTCTTGGAAAC
CCTGTTCCTGATATTCGGTGGCGGAAGGTGCTAGAACCCATGCCTACCACAGCTGAGATCAGCA
CCTCAGGGGCTGTCCTCAAGATCTTCAACATCCAGCTAGAAGATGAAGGGCTCTACGAGTGCGA
GGCTGAGAACATTAGGGGAAAGGACAAGCACCAGGCAAGAATTTATGTTCAAGCATTTCCTGAA
TGGGTAGAGCATATCAATGACACTGAAGTGGACATAGGCAGTGACCTCTACTGGCCTTGTGTGG
CCACAGGGAAGCCCATCCCTACCATCAGGTGGCTGAAAAATGGGTACGCGTATCACAAAGGGGA
ACTGAGGCTGTATGACGTGACTTTTGAAAACGCCGGGATGTACCAGTGCATAGCAGAAAACGCG
TATGGGACCATTTATGCAAATGCTGAACTCAAGATCCTGGCTTTAGCTCCAACTTTTGAAATGA
ATCCCATGAAGAAGAAGATCCTGGCTGCGAAAGGAGGAAGGGTTATCATTGAGTGCAAACCCAA
GGCTGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACAGAGTGGCTTGTCAACAGCAGCAGA
ATACTCATATGGGAAGATGGTAGCTTGGAAATCAATAATATTACAAGAAATGATGGAGGAATCT
ATACATGCTTTGCAGAAAACAACAGAGGGAAAGCTAATAGCACCGGGACTCTGGTGATCACAAA
TCCCACACGAATCATTTTGGCCCCAATCAATGCTGATATCACTGTTGGAGAAAACGCTACCATG
CAGTGTGCTGCGTCCTTTGATCCTTCCTTGGATCTCACGTTCGTCTGGTCTTTCAATGGCTACG
TGATTGACTTTAACAAGGAAATTACAAATATTCATTACCAGAGGAATTTTATGCTCGACGCCAA
TGGGGAACTGCTCATCCGAAACGCGCAGCTGAAACACGCAGGACGGTACACGTGCACAGCGCAG
ACAATCGTGGACAATTCTTCAGCTTCAGCTGACCTTGTCGTACGAGGCCCCCCAGGCCCTCCAG
GTGGCCTGAGAATAGAAGACATCAGAGCTACCTCTGTGGCACTGACTTGGAGCCGTGGTTCAGA
CAATCACAGCCCTATCTCTAAATACACTATCCAGACCAAGACGATTCTCTCAGATGACTGGAAA
GACGCAAAGACGGATCCCCCAATCATTGAAGGAAACATGGAGTCAGCAAAAGCAGTCGATTTGA
TCCCATGGATGGAGTACGAATTTCGAGTGGTAGCAACCAATACTTTGGGGACTGGAGAGCCCAG
CATACCCTCAAACAGGATCAAAACCGATGGCGCTGCACCAAATGTGGCTCCCTCAGACGTAGGT
GGTGGGGGCGGAACCAACAGAGAGCTGACAATAACGTGGGCGCCTTTGTCCAGAGAATACCATT
ATGGTAACAATTTTGGTTACATAGTGGCATTCAAGCCATTCGATGGAGAAGAGTGGAAGAAAGT
GACCGTTACCAATCCGGATACTGGCCGCTACGTCCACAAGGACGAAACCATGACCCCTTCCACC
GCGTTTCAAGTCAAAGTGAAGGCATTCAACAATAAAGGAGACGGGCCCTACAGCCTCATAGCTG
TCATCAACTCAGCACAAGACGCTCCCAGTGAAGCCCCCACAGAAGTAGGGGTCAAAGTGCTATC
GTCCTCTGAGATCTCTGTCCATTGGAAGCACGTTCTAGAGAAGATTGTGGAAAGCTATCAAATT
CGGTACTGGGCCGGTCACGACAAAGAAGCAGCGGCGCACAGAGTTCAAGTCACCAGCCAGGAGT
ACTCAGCCAGGCTGGAGAACCTTCTGCCGGACACTCAGTACTTCATAGAGGTGGGAGCCTGTAA
CAGCGCGGGGTGCGGACCTTCCAGCGACGTGATCGAGACCTTCACCAGAAAAGCCCCTCCCAGC
CAACCACCAAGGATCATCAGTTCCGTGAGGTCTGGCTCCCGATACATAATCACGTGGGATCATG
TCGTGGCACTATCCAATGAATCTACAGTGACAGGCTACAAGATACTCTATAGACCTGACGGCCA
ACATGACGGTAAGCTGTTCTCCACGCACAAGCACTCCATAGAAGTCCCCATCCCCAGAGACGGA
GAGTACGTAGTCGAAGTTCGAGCACACAGTGATGGAGGAGATGGGGTAGTGTCCCAAGTCAAAA
TTTCAGGTGTGTCCACGCTGTCATCGGGTCTCCTCAGCTTGCTCCTGCCCTCCCTTGGCTTTCT
CGTCTTCTATTCGGAATTCTGAACGTTGTGACATTTGCTGTTCTCATCCTCGCTCAGAGGATGC
TCTTCATCATGGGATGACTGTAATTCCTTCTAATCCCTGCGGCTCCATCCTAAGCCAAATAAAT
TAGACTCTAACAAGCTCTTCAACCGATTTCCCAACACATTACGACTGAGGCATTCAGGAACCCC
TTCATCCAAAAGAATAACTTGCAAATGGAAATAAAAATGATTTTTAACTCGTTCCAATATGCCT
TATAAACCATTTAACCTGATTCTGTGAAAGTTGCATGATTTAATTCAATGGGCAAGTTACAGTG
TTCAGTTCAATGCCATAGGCTGTAGAGTGAAGTAAGCTCACCATACACAGGTGCTTTACATTTA
ATGACAAGTTGTGAAATATATTAGAGGTTGAATTGTTGATTGTATGTGGTATGTGTAAGAGTAA
GGCCGTCTCTTGTATTAGCCTATATGTTTGGGGTCCTGCCTATCTTTGAACGACCCTTATCATT
CATTGTCTTTTGAGTTTTCCATAAAATTAAAACAAAAATGGAACAAAAATATCTGACATAAACA
CAATTACCAAATCGCTTTACTGAATGAGTTGGAAGTTTTTTGACTACGAAAACCAAATTACAGA
ACTTCCTATCAGTATTCTTATTTTTGATGTAATTTTCTACATATTTGCTTTTCGGTTAGTTTTC
TAATGCTGGCGTTCCCATGCCACGTGAGGATTTTTGTTTTTTGTTTTTTGTTTTTTTTTTTTTT
TTTACTTTTGTATTCTAATCTGAAGTTGTTTTGCGCTTTTCTTCTCATCAACGTCAAAGCACAG
AAGCTGCAGCTCACCCGGAACATTGTCTGTTGCTGTGTTTATCCGTGTGTGGAATGACAGGTCT
GGGGAAGTAGAATGCTTTTCTTTATATTGCAACATGATCGTCTTTATCCAGATAGAAACAGGTG
ACAGTAAAGTGTCAGAGTCTCTGAATGTCCCCATTGTTCTGGTCTTGTGCTCCATGCCTAAGTA
TAATATAAACTCTCTTGATAGAAGGTGTAGAATCAAGAATTCATATGCAGGTTGGAAAAAAGCT
ACAGAATTCCATTTCAAGAAATTTAAAGCTCATTTCCCATTCCCAATGCAATACTGAGAACTGG
CTAAAAATACCAAATCAGAATGTTGTTCGTGGTCCTATAAAGAATATGCAAAGTCGGGAGGCAG
GAGAGGCAGACAGTGTCCTGTCCAGGGATGTCTCCCAAGTGATGATGTGGAGGGATTTGTGAGA
TGTGAAAGGGAAACCTGTGTTTCCCCATTATCCATGGTGTGCCCAGAGATGTGTCTGAGTGTGG
GTGTGGAAGAACTCGGGTAATAAAGAGTTAGCTGGCTCCTGAAATTGTGCAATGTTTGCTTCCT
GGAGAAGTCTAATCCTATTTTATTAGCACAATCTTGCTGGCTAATTAGAGACAGAGTTTATCTT
TTTAGAAAAGATACCCTATAGGTCCATAAAGAATATTTACAGGAAGCAAAAAATAGATCTATTA
ATATGTTATCCCTAACTTTAATTTGTATAATTTTTGTACTATATGTGTAAATGTTTAAAGTCCT
CATTATGAAAATATCAATAAATATTTCATTAATTTACACTTAACACTTTGTTATACAAATGAAA
CTTTTTAAATCAGTAAAACAGATGCTCTCCCAGTAGAAGCATGTCAACAAACCATTGCCAGATT
TCATAAAATATTTAATGACTTGAAAAAGAAGAAAATGACTTCATACTTTAGGGAGATGAACACT
CTGTAAGCTTTCCGGACAAATGTTGTGTTTTCCTTGCTATATTCGGGGGTTCTCCTCTTGCGAT
GTGACCCATGTTGGGCGTTTTTGTATCATCGATAACAACTACATCTTTTGCCAAATGCATGCCT
GCCTTTTCTTTTCCAATATGTGGTGATAAAGACCAAAACCGGCTAGATTTTTGCATGAAAACGG
TTCTGAAAGATAAGAAAACAGACTTTGAAAGTTGTTTAGAGTAAATATGTGGCAGATAGACTCA
ACTCTCTCATGCACAAAGGACTTCCGCTTTTCATTTTCTCATATAATTGTACAGATGTGACTGG
GGCCATCGGTTTTAAAGTGTTGTCAAGCTAACCAATGTATCATATGCTTTAAGATGCAAGATTC
TTAATTAAACTTTATATAGCTATAGACACATCTGTTGTTTCTTTGTATCCCAGGAGAGGTAATA
GTAGTTTTATTTGATACTGATAAATAACGAATTGATTTTTTAGTTATTTTTTATCATTTTTTCA
ATGGAGTAGTATAGGACCGTCATTTGTCCTTTTTATGAATGAATACAAATTATAAAGAAATAAA
TGTCTTTACTGTTGCCCAAAAAA

hide sequence

RefSeq Acc Id:

XM_008765659 ⟹ XP_008763881

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,664 - 125,378,244 (+)	NCBI
mRatBN7.2	7	123,263,146 - 123,499,462 (+)	NCBI
Rnor_6.0	7	133,290,606 - 133,526,962 (+)	NCBI

Sequence:

show sequence

CAATAACTGCACTCTGAGGCCCCGGCTTCTGCTGTCAAGTAGCTAGGGTGGGCTCCGCCTAGGC
GAGGAGTGGCGCTGGTGGGAGATGCGCTCCCAGCTGTTTGCGGCGGGAGCGGGAAAGCTGTAGG
GCCCAGGCAGCGAGGCGGCGACAGGAGTGGAGAACAGGTCTTTCATAGTTGTCAACTGCCATAA
AGCTCCCATTCCTTCTGGAAACTGACCCATCTATTCAACAGAAGATGAAAACCCCATTGCTGGT
CAGTCATCTCCTGCTAATCTCCTTAACATCCTGTCTAGGAGAGTTTACATGGCACAGAAGATAT
GGTCATGGAGTTTCTGAGGAGGATAAAGGATTTGGACCCATTTTTGAAGAGCAACCAATCAATA
CCATTTACCCAGAAGAGTCACTGGAAGGCAAAGTGTCGCTCAACTGCCGGGCACGGGCAAGCCC
ATTTCCGGTTTACAAGTGGAGAATGAATAACGGGGACGTTGACCTGACGAACGATCGATACAGC
ATGGTCGGAGGGAACCTTGTTATCAATAACCCTGACAAACAGAAAGACGCAGGAATATACTACT
GCTTGGCGTCCAACAACTACGGGATGGTCAGAAGCACCGAGGCCACCCTGAGCTTTGGGTATCT
TGACCCCTTTCCTCCTGAGGATCGTCCTGAAGTGAAGGTGAAGGAAGGGAAGGGCATGGTGCTT
CTCTGCGACCCTCCCTACCACTTCCCAGACGATCTTAGCTACCGCTGGCTTCTGAATGAATTTC
CCGTCTTTATCACAATGGATAAGCGAAGATTCGTGTCTCAGACCAACGGTAATCTCTACATCGC
GAACGTTGAGTCTTCTGATAGAGGCAACTATTCCTGCTTCGTGTCCAGCCCTTCTATTACAAAG
AGCGTGTTCAGCAAATTTATACCCCTCATTCCGATACCTGAGCGAACAACGAAGCCATATCCTG
CTGACATTGTAGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACCTTAGAGTG
CTTCGCTCTTGGAAACCCTGTTCCTGATATTCGGTGGCGGAAGGTGCTAGAACCCATGCCTACC
ACAGCTGAGATCAGCACCTCAGGGGCTGTCCTCAAGATCTTCAACATCCAGCTAGAAGATGAAG
GGCTCTACGAGTGCGAGGCTGAGAACATTAGGGGAAAGGACAAGCACCAGGCAAGAATTTATGT
TCAAGCATTTCCTGAATGGGTAGAGCATATCAATGACACTGAAGTGGACATAGGCAGTGACCTC
TACTGGCCTTGTGTGGCCACAGGGAAGCCCATCCCTACCATCAGGTGGCTGAAAAATGGGTACG
CGTATCACAAAGGGGAACTGAGGCTGTATGACGTGACTTTTGAAAACGCCGGGATGTACCAGTG
CATAGCAGAAAACGCGTATGGGACCATTTATGCAAATGCTGAACTCAAGATCCTGGCTTTAGCT
CCAACTTTTGAAATGAATCCCATGAAGAAGAAGATCCTGGCTGCGAAAGGAGGAAGGGTTATCA
TTGAGTGCAAACCCAAGGCTGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACAGAGTGGCT
TGTCAACAGCAGCAGAATACTCATATGGGAAGATGGTAGCTTGGAAATCAATAATATTACAAGA
AATGATGGAGGAATCTATACATGCTTTGCAGAAAACAACAGAGGGAAAGCTAATAGCACCGGGA
CTCTGGTGATCACAAATCCCACACGAATCATTTTGGCCCCAATCAATGCTGATATCACTGTTGG
AGAAAACGCTACCATGCAGTGTGCTGCGTCCTTTGATCCTTCCTTGGATCTCACGTTCGTCTGG
TCTTTCAATGGCTACGTGATTGACTTTAACAAGGAAATTACAAATATTCATTACCAGAGGAATT
TTATGCTCGACGCCAATGGGGAACTGCTCATCCGAAACGCGCAGCTGAAACACGCAGGACGGTA
CACGTGCACAGCGCAGACAATCGTGGACAATTCTTCAGCTTCAGCTGACCTTGTCGTACGAGGT
AAAAAGAGAAAAGATGGAGAGAAAAACATGGTGGAGCCCTTTCTCCCCGTCTGTGCCAGCCTGC
CTCCAACCTGGTGAACGGGACCCTCACCTTTTGTGTGACAGCCCCTCCCCCTCAAAATGGGATA
CTAGATTTGACTAATTAACTCATCCTTGTAACTTCTGCGATTCCACTCACCATCCTAGTTCTTA
GAGGATGTTTGAGACTCGTTAACATGCTTTGAGCTGAGGGGTTTTACAATCCTGGCATAGCTTC
ACTAACACCTGAAAGCAACGCCTAGCAAACTAATCTAGGGCATCTAAAAGTAGCCCAGTGAAAG
CCCCACTTTTCCGGTCCTGTTTTTCTTTGAGATTATTAGCTCCTTACCTGCAAAAGCTAAGAAG
AACCGGTGTCATACAAAACAGGCGTGCTGCTGGTACGTGGACTGTTTAATTTATTAAAGCAGGT
TTAAAAAAAAAAAAGGTGTTGCTGTCTGATTCCCCAGACATTTTAATCGGAAAGCAAGCTGGGC
GAGGCCGTACGACCAGCGACTTGCTTACCACACTGCTGTTCATACGGTGGAGGGACACTTGAAA
AGAAGTTGCAATCAGCCAGCGACCGTGACCTTCAAGAGTCTGAGGGCACAGTCTGGGTTTGGAA
AGTGAACTTGGACAGTGTTTGTAGCAAGATATTCAGGAAGATGGCCGAGTCTTCAAAGTATGCT
TCCACATTAAATTTTCTTGACTCCTGCCTCGATCCTTTGTGGCCTTCCTCTACAGGAGAAAAGT
TGAGGCTTGTATTAAGATGGGGCCAAAGTGAGAACTGACCCTGAAGGCGAAATTCTTCCTGGGG
CTGCTTAAATTCCTTCTGCTGTCTTTATTTGAGAGATGCATACTTAAAATTCATAATATTTTTT
CAAGAAGGAACGTTACCCTTCTTAGACAGTTTTATGTTTAGCAATGACACATTATTTAGTCCTT
TCATTTAGCGACCCCAGCATCTGTGGTTGGAAAAACTCTCAGGAGCCATTTCAGGGATGTGTGT
GTTGCTCTCAGATAATTATACATGGATGGTCACTTTGTCAATAGTTTTCAAAGGACAAACACCT
CTGACTTACTTATGTTCACCCTCTATATCTTCTAGTTGTGGTTGGCATAAAGAACCACGGGCGT
CAATTTCTAGTCTAATAAATATTTGAGATTA

hide sequence

RefSeq Acc Id:

XM_017594616 ⟹ XP_017450105

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,638 - 125,440,397 (+)	NCBI
mRatBN7.2	7	123,263,146 - 123,560,896 (+)	NCBI
Rnor_6.0	7	133,290,606 - 133,588,314 (+)	NCBI

Sequence:

show sequence

CAATAACTGCACTCTGAGGCCCCGGCTTCTGCTGTCAAGTAGCTAGGGTGGGCTCCGCCTAGGC
GAGGAGTGGCGCTGGTGGGAGATGCGCTCCCAGCTGTTTGCGGCGGGAGCGGGAAAGCTGTAGG
GCCCAGGCAGCGAGGCGGCGACAGGAGTGGAGAACAGGTCTTTCATAGTTGTCAACTGCCATAA
AGCTCCCATTCCTTCTGGAAACTGACCCATCTATTCAACAGAAGATGAAAACCCCATTGCTGGT
CAGTCATCTCCTGCTAATCTCCTTAACATCCTGTCTAGGAGAGTTTACATGGCACAGAAGATAT
GGTCATGGAGTTTCTGAGGAGGATAAAGGATTTGGACCCATTTTTGAAGAGCAACCAATCAATA
CCATTTACCCAGAAGAGTCACTGGAAGGCAAAGTGTCGCTCAACTGCCGGGCACGGGCAAGCCC
ATTTCCGGTTTACAAGTGGAGAATGAATAACGGGGACGTTGACCTGACGAACGATCGATACAGC
ATGGTCGGAGGGAACCTTGTTATCAATAACCCTGACAAACAGAAAGACGCAGGAATATACTACT
GCTTGGCGTCCAACAACTACGGGATGGTCAGAAGCACCGAGGCCACCCTGAGCTTTGGGTATCT
TGACCCCTTTCCTCCTGAGGATCGTCCTGAAGTGAAGGTGAAGGAAGGGAAGGGCATGGTGCTT
CTCTGCGACCCTCCCTACCACTTCCCAGACGATCTTAGCTACCGCTGGCTTCTGAATGAATTTC
CCGTCTTTATCACAATGGATAAGCGAAGATTCGTGTCTCAGACCAACGGTAATCTCTACATCGC
GAACGTTGAGTCTTCTGATAGAGGCAACTATTCCTGCTTCGTGTCCAGCCCTTCTATTACAAAG
AGCGTGTTCAGCAAATTTATACCCCTCATTCCGATACCTGAGCGAACAACGAAGCCATATCCTG
CTGACATTGTAGTGCAGTTCAAGGACATATACACCATGATGGGCCAAAATGTGACCTTAGAGTG
CTTCGCTCTTGGAAACCCTGTTCCTGATATTCGGTGGCGGAAGGTGCTAGAACCCATGCCTACC
ACAGCTGAGATCAGCACCTCAGGGGCTGTCCTCAAGATCTTCAACATCCAGCTAGAAGATGAAG
GGCTCTACGAGTGCGAGGCTGAGAACATTAGGGGAAAGGACAAGCACCAGGCAAGAATTTATGT
TCAAGCATTTCCTGAATGGGTAGAGCATATCAATGACACTGAAGTGGACATAGGCAGTGACCTC
TACTGGCCTTGTGTGGCCACAGGGAAGCCCATCCCTACCATCAGGTGGCTGAAAAATGGGTACG
CGTATCACAAAGGGGAACTGAGGCTGTATGACGTGACTTTTGAAAACGCCGGGATGTACCAGTG
CATAGCAGAAAACGCGTATGGGACCATTTATGCAAATGCTGAACTCAAGATCCTGGCTTTAGCT
CCAACTTTTGAAATGAATCCCATGAAGAAGAAGATCCTGGCTGCGAAAGGAGGAAGGGTTATCA
TTGAGTGCAAACCCAAGGCTGCACCAAAACCCAAGTTTTCATGGAGCAAAGGGACAGAGTGGCT
TGTCAACAGCAGCAGAATACTCATATGGGAAGATGGTAGCTTGGAAATCAATAATATTACAAGA
AATGATGGAGGAATCTATACATGCTTTGCAGAAAACAACAGAGGGAAAGCTAATAGCACCGGGA
CTCTGGTGATCACAAATCCCACACGAATCATTTTGGCCCCAATCAATGCTGATATCACTGTTGG
AGAAAACGCTACCATGCAGTGTGCTGCGTCCTTTGATCCTTCCTTGGATCTCACGTTCGTCTGG
TCTTTCAATGGCTACGTGATTGACTTTAACAAGGAAATTACAAATATTCATTACCAGAGGAATT
TTATGCTCGACGCCAATGGGGAACTGCTCATCCGAAACGCGCAGCTGAAACACGCAGGACGGTA
CACGTGCACAGCGCAGACAATCGTGGACAATTCTTCAGCTTCAGCTGACCTTGTCGTACGAGGC
CCCCCAGGCCCTCCAGGTGGCCTGAGAATAGAAGACATCAGAGCTACCTCTGTGGCACTGACTT
GGAGCCGTGGTTCAGACAATCACAGCCCTATCTCTAAATACACTATCCAGACCAAGACGATTCT
CTCAGATGACTGGAAAGACGCAAAGACGGATCCCCCAATCATTGAAGGAAACATGGAGTCAGCA
AAAGCAGTCGATTTGATCCCATGGATGGAGTACGAATTTCGAGTGGTAGCAACCAATACTTTGG
GGACTGGAGAGCCCAGCATACCCTCAAACAGGATCAAAACCGATGGCGCTGCACCAAATGTGGC
TCCCTCAGACGTAGGTGGTGGGGGCGGAACCAACAGAGAGCTGACAATAACGTGGGCGCCTTTG
TCCAGAGAATACCATTATGGTAACAATTTTGGTTACATAGTGGCATTCAAGCCATTCGATGGAG
AAGAGTGGAAGAAAGTGACCGTTACCAATCCGGATACTGGCCGCTACGTCCACAAGGACGAAAC
CATGACCCCTTCCACCGCGTTTCAAGTCAAAGTGAAGGCATTCAACAATAAAGGAGACGGGCCC
TACAGCCTCATAGCTGTCATCAACTCAGCACAAGACGCTCCCAGTGAAGCCCCCACAGAAGTAG
GGGTCAAAGTGCTATCGTCCTCTGAGATCTCTGTCCATTGGAAGCACGTTCTAGAGAAGATTGT
GGAAAGCTATCAAATTCGGTACTGGGCCGGTCACGACAAAGAAGCAGCGGCGCACAGAGTTCAA
GTCACCAGCCAGGAGTACTCAGCCAGGCTGGAGAACCTTCTGCCGGACACTCAGTACTTCATAG
AGGTGGGAGCCTGTAACAGCGCGGGGTGCGGACCTTCCAGCGACGTGATCGAGACCTTCACCAG
AAAAGCCCCTCCCAGCCAACCACCAAGGATCATCAGTTCCGTGAGGTCTGGCTCCCGATACATA
ATCACGTGGGATCATGTCGTGGCACTATCCAATGAATCTACAGTGACAGGCTACAAGATACTCT
ATAGACCTGACGGCCAACATGACGGTAAGCTGTTCTCCACGCACAAGCACTCCATAGAAGTCCC
CATCCCCAGAGACGGAGAGTACGTAGTCGAAGTTCGAGCACACAGTGATGGAGGAGATGGGGTA
GTGTCCCAAGTCAAAATTTCAGGTGTGTCCACGCTGTCATCGGGTCTCCTCAGCTTGCTCCTGC
CCTCCCTTGGCTTTCTCGTCTTCTATTCGGAATTCTGAACGTTGTGACATTTGCTGTTCTCATC
CTCGCTCAGAGGATGCTCTTCATCATGGGATGACTGTAATTCCTTCTAATCCCTGCGGCTCCAT
CCTAAGCCAAATAAATTAGACTCTAACAAGCTCTTCAACCGATTTCCCAACACATTACGACTGA
GGCATTCAGGAACCCCTTCATCCAAAAGAATAACTTGCAAATGGAAATAAAAATGATTTTTAAC
TCGTTCCAATATGCCTTATAAACCATTTAACCTGATTCTGTGAAAGTTGCATGATTTAATTCAA
TGGGCAAGTTACAGTGTTCAGTTCAATGCCATAGGCTGTAGAGTGAAGTAAGCTCACCATACAC
AGGTGCTTTACATTTAATGACAAGTTGTGAAATATATTAGAGGTTGAATTGTTGATTGTATGTG
GTATGTGTAAGAGTAAGGCCGTCTCTTGTATTAGCCTATATGTTTGGGGTCCTGCCTATCTTTG
AACGACCCTTATCATTCATTGTCTTTTGAGTTTTCCATAAAATTAAAACAAAAATGGAACAAAA
ATATCTGACATAAACACAATTACCAAATCGCTTTACTGAATGAGTTGGAAGTTTTTTGACTACG
AAAACCAAATTACAGAACTTCCTATCAGTATTCTTATTTTTGATGTAATTTTCTACATATTTGC
TTTTCGGTTAGTTTTCTAATGCTGGCGTTCCCATGCCACGTGAGGATTTTTGTTTTTTGTTTTT
TGTTTTTTTTTTTTTTTTTACTTTTGTATTCTAATCTGAAGTTGTTTTGCGCTTTTCTTCTCAT
CAACGTCAAAGCACAGAAGCTGCAGCTCACCCGGAACATTGTCTGTTGCTGTGTTTATCCGTGT
GTGGAATGACAGGTCTGGGGAAGTAGAATGCTTTTCTTTATATTGCAACATGATCGTCTTTATC
CAGATAGAAACAGGTGACAGTAAAGTGTCAGAGTCTCTGAATGTCCCCATTGTTCTGGTCTTGT
GCTCCATGCCTAAGTATAATATAAACTCTCTTGATAGAAGGTGTAGAATCAAGAATTCATATGC
AGGTTGGAAAAAAGCTACAGAATTCCATTTCAAGAAATTTAAAGCTCATTTCCCATTCCCAATG
CAATACTGAGAACTGGCTAAAAATACCAAATCAGAATGTTGTTCGTGGTCCTATAAAGAATATG
CAAAGTCGGGAGGCAGGAGAGGCAGACAGTGTCCTGTCCAGGGATGTCTCCCAAGTGATGATGT
GGAGGGATTTGTGAGATGTGAAAGGGAAACCTGTGTTTCCCCATTATCCATGGTGTGCCCAGAG
ATGTGTCTGAGTGTGGGTGTGGAAGAACTCGGGTAATAAAGAGTTAGCTGGCTCCTGAAATTGT
GCAATGTTTGCTTCCTGGAGAAGTCTAATCCTATTTTATTAGCACAATCTTGCTGGCTAATTAG
AGACAGAGTTTATCTTTTTAGAAAAGATACCCTATAGGTCCATAAAGAATATTTACAGGAAGCA
AAAAATAGATCTATTAATATGTTATCCCTAACTTTAATTTGTATAATTTTTGTACTATATGTGT
AAATGTTTAAAGTCCTCATTATGAAAATATCAATAAATATTTCATTAATTTACACTTAACACTT
TGTTATACAAATGAAACTTTTTAAATCAGTAAAACAGATGCTCTCCCAGTAGAAGCATGTCAAC
AAACCATTGCCAGATTTCATAAAATATTTAATGACTTGAAAAAGAAGAAAATGACTTCATACTT
TAGGGAGATGAACACTCTGTAAGCTTTCCGGACAAATGTTGTGTTTTCCTTGCTATATTCGGGG
GTTCTCCTCTTGCGATGTGACCCATGTTGGGCGTTTTTGTATCATCGATAACAACTACATCTTT
TGCCAAATGCATGCCTGCCTTTTCTTTTCCAATATGTGGTGATAAAGACCAAAACCGGCTAGAT
TTTTGCATGAAAACGGTTCTGAAAGATAAGAAAACAGACTTTGAAAGTTGTTTAGAGTAAATAT
GTGGCAGATAGACTCAACTCTCTCATGCACAAAGGACTTCCGCTTTTCATTTTCTCATATAATT
GTACAGATGTGACTGGGGCCATCGGTTTTAAAGTGTTGTCAAGCTAACCAATGTATCATATGCT
TTAAGATGCAAGATTCTTAATTAAACTTTATATAGCTATAGACACATCTGTTGTTTCTTTGTAT
CCCAGGAGAGGTAATAGTAGTTTTATTTGATACTGATAAATAACGAATTGATTTTTTAGTTATT
TTTTATCATTTTTTCAATGGAGTAGTATAGGACCGTCATTTGTCCTTTTTATGAATGAATACAA
ATTATAAAGAAATAAATGTCTTTACTGTTGCCCAAAAAA

hide sequence

RefSeq Acc Id:

XM_039078298 ⟹ XP_038934226

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,672 - 125,440,397 (+)	NCBI
mRatBN7.2	7	123,263,146 - 123,560,896 (+)	NCBI

RefSeq Acc Id:

XM_063262899 ⟹ XP_063118969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,672 - 125,440,397 (+)	NCBI

RefSeq Acc Id:

XM_063262900 ⟹ XP_063118970

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,306,208 - 125,440,397 (+)	NCBI

RefSeq Acc Id:

XM_063262901 ⟹ XP_063118971

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,672 - 125,440,397 (+)	NCBI

RefSeq Acc Id:

XM_063262902 ⟹ XP_063118972

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,672 - 125,440,397 (+)	NCBI

RefSeq Acc Id:

XM_063262903 ⟹ XP_063118973

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,251,709 - 125,378,244 (+)	NCBI

RefSeq Acc Id:

XM_063262904 ⟹ XP_063118974

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,672 - 125,378,244 (+)	NCBI

RefSeq Acc Id:

XM_063262905 ⟹ XP_063118975

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,672 - 125,378,244 (+)	NCBI

RefSeq Acc Id:

XM_063262906 ⟹ XP_063118976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,251,886 - 125,378,244 (+)	NCBI

RefSeq Acc Id:

XM_063262907 ⟹ XP_063118977

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,142,672 - 125,378,244 (+)	NCBI

RefSeq Acc Id:

XM_063262908 ⟹ XP_063118978

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	125,201,698 - 125,378,244 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001426798	(Get FASTA)	NCBI Sequence Viewer
	NP_001426799	(Get FASTA)	NCBI Sequence Viewer
	NP_001426800	(Get FASTA)	NCBI Sequence Viewer
	NP_001426801	(Get FASTA)	NCBI Sequence Viewer
	NP_476459	(Get FASTA)	NCBI Sequence Viewer
	XP_006242239	(Get FASTA)	NCBI Sequence Viewer
	XP_008763881	(Get FASTA)	NCBI Sequence Viewer
	XP_017450105	(Get FASTA)	NCBI Sequence Viewer
	XP_038934226	(Get FASTA)	NCBI Sequence Viewer
	XP_063118969	(Get FASTA)	NCBI Sequence Viewer
	XP_063118970	(Get FASTA)	NCBI Sequence Viewer
	XP_063118971	(Get FASTA)	NCBI Sequence Viewer
	XP_063118972	(Get FASTA)	NCBI Sequence Viewer
	XP_063118973	(Get FASTA)	NCBI Sequence Viewer
	XP_063118974	(Get FASTA)	NCBI Sequence Viewer
	XP_063118975	(Get FASTA)	NCBI Sequence Viewer
	XP_063118976	(Get FASTA)	NCBI Sequence Viewer
	XP_063118977	(Get FASTA)	NCBI Sequence Viewer
	XP_063118978	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA07504	(Get FASTA)	NCBI Sequence Viewer
	CAI47001	(Get FASTA)	NCBI Sequence Viewer
	EDL76612	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006219
	ENSRNOP00000006219.3
	ENSRNOP00000098410
GenBank Protein	Q63198	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_476459 ⟸ NM_057118
- Peptide Label:	precursor
- UniProtKB:	Q63198 (UniProtKB/Swiss-Prot), A6K7R9 (UniProtKB/TrEMBL), A0A8L2R3Y6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKTPLLVSHLLLISLTSCLGEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLN CRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEA TLSFGYLDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQT NGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMG QNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDK HQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFE NAGMYQCIAENAYGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSW SKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPI NADITVGENATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQ LKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYT IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTD GAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGR YVHKDETMTPSTAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWK HVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSD VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH KHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSTLSSGLLSLLLPSLGFLVFYSEF hide sequence

RefSeq Acc Id:

XP_006242239 ⟸ XM_006242177

- Peptide Label:

isoform X1

- Sequence:

show sequence

MKTPLLVSHLLLISLTSCLGEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLN
CRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEA
TLSFGYLDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQT
NGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMG
QNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDK
HQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFE
NAGMYQCIAENAYGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSW
SKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPI
NADITVGENATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQ
LKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYT
IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTD
GAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGR
YVHKDETMTPSTAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWK
HVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSD
VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH
KHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSTLSSGLLSLLLPSLGFLVFYSEF

hide sequence

RefSeq Acc Id:

XP_008763881 ⟸ XM_008765659

- Peptide Label:

isoform X2

- Sequence:

show sequence

MKTPLLVSHLLLISLTSCLGEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLN
CRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEA
TLSFGYLDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQT
NGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMG
QNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDK
HQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFE
NAGMYQCIAENAYGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSW
SKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPI
NADITVGENATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQ
LKHAGRYTCTAQTIVDNSSASADLVVRGKKRKDGEKNMVEPFLPVCASLPPTW

hide sequence

RefSeq Acc Id:

XP_017450105 ⟸ XM_017594616

- Peptide Label:

isoform X1

- Sequence:

show sequence

MKTPLLVSHLLLISLTSCLGEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLN
CRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEA
TLSFGYLDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQT
NGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMG
QNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDK
HQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFE
NAGMYQCIAENAYGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSW
SKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPI
NADITVGENATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFMLDANGELLIRNAQ
LKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYT
IQTKTILSDDWKDAKTDPPIIEGNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTD
GAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGR
YVHKDETMTPSTAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWK
HVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSD
VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH
KHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGVSTLSSGLLSLLLPSLGFLVFYSEF

hide sequence

Ensembl Acc Id:

ENSRNOP00000006219 ⟸ ENSRNOT00000006219

Ensembl Acc Id:

ENSRNOP00000071355 ⟸ ENSRNOT00000080621

RefSeq Acc Id:	XP_038934226 ⟸ XM_039078298
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063118969 ⟸ XM_063262899
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063118972 ⟸ XM_063262902
- Peptide Label:	isoform X1
- UniProtKB:	Q63198 (UniProtKB/Swiss-Prot), A6K7R9 (UniProtKB/TrEMBL), A0A8L2R3Y6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118971 ⟸ XM_063262901
- Peptide Label:	isoform X1
- UniProtKB:	Q63198 (UniProtKB/Swiss-Prot), A6K7R9 (UniProtKB/TrEMBL), A0A8L2R3Y6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063118974 ⟸ XM_063262904
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118977 ⟸ XM_063262907
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118975 ⟸ XM_063262905
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118978 ⟸ XM_063262908
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118973 ⟸ XM_063262903
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118976 ⟸ XM_063262906
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063118970 ⟸ XM_063262900
- Peptide Label:	isoform X1
- UniProtKB:	Q63198 (UniProtKB/Swiss-Prot), A6K7R9 (UniProtKB/TrEMBL), A0A8L2R3Y6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000098410 ⟸ ENSRNOT00000120797

Protein Domains

Fibronectin type-III Ig-like Ig-like C2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q63198-F1-model_v2	AlphaFold	Q63198	1-1021	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621300	AgrOrtholog
BioCyc Gene	G2FUF-32360	BioCyc
Ensembl Genes	ENSRNOG00000004438	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000006219	ENTREZGENE
	ENSRNOT00000006219.5	UniProtKB/Swiss-Prot
	ENSRNOT00000120797	ENTREZGENE
Gene3D-CATH	2.60.40.10	UniProtKB/Swiss-Prot
InterPro	Contactin-1	UniProtKB/Swiss-Prot
	Contactin-1_2_Ig1	UniProtKB/Swiss-Prot
	Contactin-1_Ig3	UniProtKB/Swiss-Prot
	Contactin-1_Ig6	UniProtKB/Swiss-Prot
	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Ig-like_dom	UniProtKB/Swiss-Prot
	Ig-like_dom_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Ig_I-set	UniProtKB/Swiss-Prot
	Ig_sub	UniProtKB/Swiss-Prot
	Ig_sub2	UniProtKB/Swiss-Prot
	Immunoglobulin	UniProtKB/Swiss-Prot
KEGG Report	rno:117258	UniProtKB/Swiss-Prot
NCBI Gene	117258	ENTREZGENE
PANTHER	PROTEIN SIDEKICK	UniProtKB/Swiss-Prot
	PTHR44170:SF10	UniProtKB/Swiss-Prot
Pfam	fn3	UniProtKB/Swiss-Prot
	I-set	UniProtKB/Swiss-Prot
	Ig_3	UniProtKB/Swiss-Prot
	PF00047	UniProtKB/Swiss-Prot
PhenoGen	Cntn1	PhenoGen
PROSITE	FN3	UniProtKB/Swiss-Prot
	IG_LIKE	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000004438	RatGTEx
SMART	FN3	UniProtKB/Swiss-Prot
	IGc2	UniProtKB/Swiss-Prot
	SM00409	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48726	UniProtKB/Swiss-Prot
	SSF49265	UniProtKB/Swiss-Prot
UniProt	A0A8L2R3Y6	ENTREZGENE
	A6K7R9	ENTREZGENE, UniProtKB/TrEMBL
	CNTN1_RAT	UniProtKB/Swiss-Prot
	Q53I74_RAT	UniProtKB/TrEMBL
	Q63198	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Cntn1	contactin 1			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Cntn1	contactin 1			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_homology	99% amino acid identity with mouse homolog	728268
gene_protein	1021 amino acids	728268

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)