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Gene: Anxa7 (annexin A7) Rattus norvegicus

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Symbol:

Anxa7

Name:

annexin A7

RGD ID:

621173

Description:

Enables calcium-dependent phospholipid binding activity. Involved in membrane fusion; response to calcium ion; and response to phorbol 13-acetate 12-myristate. Predicted to be located in several cellular components, including chromaffin granule membrane; endoplasmic reticulum membrane; and nuclear envelope. Predicted to be active in several cellular components, including nucleus; plasma membrane; and vesicle membrane. Orthologous to human ANXA7 (annexin A7); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ANXA7 (annexin A7)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Anxa7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Anxa7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ANXA7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ANXA7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Anxa7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ANXA7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ANXA7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Anxa7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Anxa7 (annexin A7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ANXA7 (annexin A7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ANXA7 (annexin A7)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Anxa7 (annexin A7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Anxa7 (annexin A7)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	AnxB11	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	AnxB9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	nex-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	nex-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	anxa7	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	anxa7	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	3,869,180 - 3,897,827 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	3,870,974 - 3,898,891 (+)	Ensembl				GRCr8
mRatBN7.2	15	3,821,798 - 3,849,659 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	3,821,845 - 3,849,385 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	3,831,970 - 3,858,757 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	5,218,394 - 5,245,181 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	3,830,787 - 3,857,575 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	4,254,470 - 4,281,296 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	4,254,499 - 4,281,287 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	8,355,756 - 8,382,551 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	4,047,956 - 4,075,981 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	746,369 - 773,156 (-)	NCBI		Celera
RGSC_v3.1	15	4,047,987 - 4,077,036 (+)	NCBI
Cytogenetic Map	15	p16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

breast cancer (ISO)

colon adenocarcinoma (ISO)

Liver Neoplasms (ISO)

Neoplasm Metastasis (ISO)

non-Hodgkin lymphoma (ISO)

ovarian cancer (ISO)

prostate cancer (ISO)

Salivary Gland Neoplasms (ISO)

skin cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4-dinitrotoluene (EXP)

2,6-dimethoxyphenol (ISO)

2,6-dinitrotoluene (EXP)

2-methoxyethanol (EXP)

3-chloropropane-1,2-diol (EXP)

4,4'-sulfonyldiphenol (ISO)

4-amino-2,6-dinitrotoluene (EXP)

acetamide (EXP)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

amphetamine (ISO)

arsane (ISO)

arsenic atom (ISO)

benzatropine (ISO)

benzo[b]fluoranthene (ISO)

beta-naphthoflavone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

bleomycin A2 (ISO)

Brodifacoum (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

cefaloridine (EXP)

cisplatin (ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

coumarin (EXP)

crocidolite asbestos (ISO)

cyproconazole (ISO)

deguelin (ISO)

dibutyl phthalate (EXP,ISO)

disodium selenite (ISO)

diuron (EXP)

epoxiconazole (ISO)

ethanol (ISO)

etoposide (ISO)

finasteride (EXP)

flutamide (EXP)

folic acid (ISO)

furan (EXP)

furfural (ISO)

gentamycin (EXP)

Hexachloro-1,3-butadiene (EXP)

indole-3-methanol (EXP)

inulin (ISO)

ivermectin (ISO)

leflunomide (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methidathion (ISO)

microcystin-LR (ISO)

N-nitrosodiethylamine (EXP)

nefazodone (EXP)

nimesulide (EXP)

Nonylphenol (EXP)

ozone (EXP,ISO)

p-toluidine (EXP)

paracetamol (EXP,ISO)

paraquat (EXP)

PCB138 (EXP)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (EXP,ISO)

picoxystrobin (ISO)

piperonyl butoxide (EXP)

pirinixic acid (EXP,ISO)

propiconazole (ISO)

quartz (ISO)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

sodium dichromate (EXP)

Soman (EXP)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

trichloroethene (EXP)

triphenyl phosphate (EXP,ISO)

valdecoxib (EXP)

valproic acid (ISO)

vorinostat (ISO)

zearalenone (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagy (IEA,ISO)

cell population proliferation (ISO)

epithelial cell differentiation (IEA,ISO)

hemostasis (ISO)

intracellular calcium ion homeostasis (ISO)

intracellular water homeostasis (ISO)

membrane fusion (IDA)

negative regulation of gene expression (IEA,ISO)

phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway (ISO)

regulation of cell shape (ISO)

response to calcium ion (IDA)

response to phorbol 13-acetate 12-myristate (IDA)

response to salt stress (ISO)

Cellular Component

alveolar lamellar body (IDA)

chromaffin granule membrane (IEA,ISO)

cytoplasm (IBA)

cytosol (ISO)

endoplasmic reticulum membrane (IEA,ISO)

nuclear envelope (ISO)

nucleus (IBA,IEA,ISO)

plasma membrane (IBA,IDA,ISO)

synapse (IEA)

vesicle (ISO)

vesicle membrane (IBA)

Molecular Function

calcium ion binding (IEA)

calcium-dependent phospholipid binding (IBA,IDA,IEA)

calcium-dependent protein binding (IEA,ISO)

GTPase-dependent fusogenic activity (ISO)

integrin binding (IEA,ISO)

phosphatidylserine binding (IBA)

phospholipid binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Calcium ionophore and phorbol ester increase membrane binding of annexin a7 in alveolar type II cells.	Chander A, etal., Cell Calcium 2003 Jan;33(1):11-7.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Secretagogues of lung surfactant increase annexin A7 localization with ABCA3 in alveolar type II cells.	Gerelsaikhan T, etal., Biochim Biophys Acta. 2011 Dec;1813(12):2017-25. doi: 10.1016/j.bbamcr.2011.07.022. Epub 2011 Sep 2.
4.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	Partial truncation of the NH2-terminus affects physical characteristics and membrane binding, aggregation, and fusion properties of annexin A7.	Naidu DG, etal., Biochim Biophys Acta. 2005 May 15;1734(2):152-68. Epub 2005 Apr 13.
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	GOA pipeline	RGD automated data pipeline
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Comprehensive gene review and curation	RGD comprehensive gene curation
12.	Prognostic impact of ANX7-GTPase in metastatic and HER2-negative breast cancer patients.	Srivastava M, etal., Clin Cancer Res. 2004 Apr 1;10(7):2344-50.
13.	ANXA7 expression represents hormone-relevant tumor suppression in different cancers.	Srivastava M, etal., Int J Cancer. 2007 Dec 15;121(12):2628-36.
14.	Defects in inositol 1,4,5-trisphosphate receptor expression, Ca(2+) signaling, and insulin secretion in the anx7(+/-) knockout mouse.	Srivastava M, etal., Proc Natl Acad Sci U S A 1999 Nov 23;96(24):13783-8.
15.	ANX7, a candidate tumor suppressor gene for prostate cancer.	Srivastava M, etal., Proc Natl Acad Sci U S A. 2001 Apr 10;98(8):4575-80. Epub 2001 Apr 3.
16.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Additional References at PubMed

PMID:9268363	PMID:10672515	PMID:12445460	PMID:12925238	PMID:14644162	PMID:15819996	PMID:16843057	PMID:19056867	PMID:19199708	PMID:19946888	PMID:20458337	PMID:21034558
PMID:21492153	PMID:21531385	PMID:22681889	PMID:22713544	PMID:23376485	PMID:23434680	PMID:23533145	PMID:24007983	PMID:28131823	PMID:29196215

Genomics

Comparative Map Data

Anxa7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	3,869,180 - 3,897,827 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	3,870,974 - 3,898,891 (+)	Ensembl				GRCr8
mRatBN7.2	15	3,821,798 - 3,849,659 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	3,821,845 - 3,849,385 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	3,831,970 - 3,858,757 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	5,218,394 - 5,245,181 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	3,830,787 - 3,857,575 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	4,254,470 - 4,281,296 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	4,254,499 - 4,281,287 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	8,355,756 - 8,382,551 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	4,047,956 - 4,075,981 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	746,369 - 773,156 (-)	NCBI		Celera
RGSC_v3.1	15	4,047,987 - 4,077,036 (+)	NCBI
Cytogenetic Map	15	p16	NCBI

ANXA7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	73,375,101 - 73,414,058 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	73,375,101 - 73,414,731 (-)	Ensembl			hg38	GRCh38
GRCh37	10	75,134,859 - 75,173,816 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	74,805,210 - 74,843,809 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	74,805,209 - 74,843,814	NCBI
Celera	10	68,420,787 - 68,459,438 (-)	NCBI		Celera
Cytogenetic Map	10	q22.2	NCBI
HuRef	10	69,129,017 - 69,167,555 (-)	NCBI		HuRef
CHM1_1	10	75,416,936 - 75,455,602 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	74,246,516 - 74,285,473 (-)	NCBI		T2T-CHM13v2.0

Anxa7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	20,505,344 - 20,530,009 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	20,505,328 - 20,530,201 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	20,455,261 - 20,480,133 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	20,455,260 - 20,480,133 (-)	Ensembl			mm10	GRCm38
MGSCv37	14	21,274,483 - 21,299,355 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	19,243,829 - 19,268,368 (-)	NCBI		MGSCv36	mm8
Celera	14	16,836,477 - 16,861,550 (-)	NCBI		Celera
Cytogenetic Map	14	A3	NCBI
cM Map	14	11.53	NCBI

Anxa7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	18,403,008 - 18,421,486 (+)	Ensembl
ChiLan1.0	NW_004955437	18,394,371 - 18,421,779 (+)	NCBI	ChiLan1.0	ChiLan1.0

ANXA7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	85,536,646 - 85,590,341 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	85,541,969 - 85,595,664 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	69,923,353 - 69,962,980 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	72,381,438 - 72,421,876 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	72,381,447 - 72,420,749 (-)	Ensembl			panPan2	panpan1.1

ANXA7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	23,933,959 - 23,961,968 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	23,934,234 - 23,961,880 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	24,071,745 - 24,099,755 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	24,214,127 - 24,242,151 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	24,214,179 - 24,242,087 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	24,111,654 - 24,139,673 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	24,312,100 - 24,340,096 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	24,666,997 - 24,695,008 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Anxa7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	57,146,447 - 57,179,174 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	5,651,719 - 5,671,050 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	5,639,193 - 5,671,369 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANXA7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	76,205,232 - 76,234,631 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	76,205,238 - 76,234,646 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	82,330,905 - 82,360,163 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ANXA7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	57,863,482 - 57,900,972 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	57,863,546 - 57,900,324 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	18,444,489 - 18,484,974 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Anxa7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624754	6,992,436 - 7,022,419 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Anxa7
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	90,260,984 - 90,288,574 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Anxa7
95 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	192
Count of miRNA genes:	136
Interacting mature miRNAs:	147
Transcripts:	ENSRNOT00000061686
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1641913	Colcr2	Colorectal carcinoma resistance QTL 2	6.57	0.0197	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	15	2315759	47315759	Rat
10401805	Kidm51	Kidney mass QTL 51			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	15	2785923	47785923	Rat
5684946	Bss98	Bone structure and strength QTL 98	3.9	0.0026	tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	15	1	39411584	Rat
1354657	Despr13	Despair related QTL 13		0.0022	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	15	1	32342855	Rat
1641887	Alcrsp14	Alcohol response QTL 14			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	15	1	44836456	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2315759	53331089	Rat
1300142	Bp191	Blood pressure QTL 191	3.14		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	15	1	15177511	Rat

Markers in Region

D15Got1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	15	3,880,145 - 3,880,273 (+)	Marker Load Pipeline
mRatBN7.2	15	3,830,919 - 3,831,049 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	4,263,605 - 4,263,732	NCBI	Rnor6.0
Rnor_5.0	15	8,364,863 - 8,364,990	UniSTS	Rnor5.0
RGSC_v3.4	15	4,058,300 - 4,058,427	UniSTS	RGSC3.4
RGSC_v3.4	15	4,058,299 - 4,058,427	RGD	RGSC3.4
Celera	15	763,923 - 764,050	UniSTS
RGSC_v3.1	15	4,058,300 - 4,058,427	RGD
RH 3.4 Map	15	65.2	RGD
RH 3.4 Map	15	65.2	UniSTS
RH 2.0 Map	15	0.0	RGD
Cytogenetic Map	15	p16	UniSTS

RH128488

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	3,848,265 - 3,848,464 (+)	MAPPER	mRatBN7.2
mRatBN7.2	2	178,286,618 - 178,286,817 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	192,971,444 - 192,971,642	NCBI	Rnor6.0
Rnor_6.0	15	4,280,952 - 4,281,150	NCBI	Rnor6.0
Rnor_5.0	15	8,382,207 - 8,382,405	UniSTS	Rnor5.0
Rnor_5.0	2	211,898,636 - 211,898,834	UniSTS	Rnor5.0
RGSC_v3.4	2	185,695,785 - 185,695,983	UniSTS	RGSC3.4
RGSC_v3.4	15	4,075,644 - 4,075,842	UniSTS	RGSC3.4
Celera	15	746,508 - 746,706	UniSTS
Celera	2	171,973,391 - 171,973,589	UniSTS
Cytogenetic Map	2	q34	UniSTS
Cytogenetic Map	15	p16	UniSTS

RH129297

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	3,848,382 - 3,848,570 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	4,281,069 - 4,281,256	NCBI	Rnor6.0
Rnor_5.0	15	8,382,324 - 8,382,511	UniSTS	Rnor5.0
RGSC_v3.4	15	4,075,761 - 4,075,948	UniSTS	RGSC3.4
Celera	15	746,402 - 746,589	UniSTS
RH 3.4 Map	15	45.6	UniSTS
Cytogenetic Map	15	p16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	92	59	6	356	192	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_130416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC115418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF280423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC070896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000061686 ⟹ ENSRNOP00000058397

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	3,871,248 - 3,897,825 (+)	Ensembl
mRatBN7.2 Ensembl	15	3,821,928 - 3,848,603 (+)	Ensembl
Rnor_6.0 Ensembl	15	4,254,499 - 4,281,287 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102608 ⟹ ENSRNOP00000079081

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	15	3,826,465 - 3,849,385 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104138 ⟹ ENSRNOP00000080216

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	3,870,974 - 3,898,891 (+)	Ensembl
mRatBN7.2 Ensembl	15	3,821,845 - 3,849,385 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108222 ⟹ ENSRNOP00000090513

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	3,876,873 - 3,898,609 (+)	Ensembl
mRatBN7.2 Ensembl	15	3,822,208 - 3,849,385 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116779 ⟹ ENSRNOP00000091902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	3,871,143 - 3,897,587 (+)	Ensembl
mRatBN7.2 Ensembl	15	3,821,928 - 3,848,603 (+)	Ensembl

RefSeq Acc Id:

NM_130416 ⟹ NP_569100

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	3,871,040 - 3,897,827 (+)	NCBI
mRatBN7.2	15	3,821,813 - 3,848,603 (+)	NCBI
Rnor_6.0	15	4,254,499 - 4,281,289 (+)	NCBI
Rnor_5.0	15	8,355,756 - 8,382,551 (+)	NCBI
RGSC_v3.4	15	4,047,956 - 4,075,981 (+)	RGD
Celera	15	746,369 - 773,156 (-)	RGD

Sequence:

show sequence

CGCGTTAAAACCAGCAGAGCCACCTGAGGGGCGCAGGGTCCCGCCCGGGCTTGGGGGCGGTCCA
GGCAGCCAGCATCCTCGCGCCGCCCATGCGCCACGCCCTCCGGCCCTCCCTGGCTCCATATTGC
AGGAAAGCGGGCTAGGGTGTGACGCTGCTTTCTGGTTCAGAATGTCATACCCAGGCTACCCCCC
GACAGGCTACCCACCTTTCCCTGGATATCCTCCTGCAGGTCAGGAGTCCTCTTTCCCCACTTCG
GGTCAGTATCCGTACCCTAGTGGCTTTCCACCAATGGGAGGAGGTGCTTACCCACCAGCTCCAA
GTGGTGGCTACCCAGGAGCTGGAGGCTACCCCTCACCTGGAGGTTATCCAGCCCCTGGGGGCTA
TCCTGGAACCCTAAATCCAGGGGGTCCTCCATCCTATCCTGGAGGTCAAGGCTTTGGGGCCCCA
CCTGGTGGGGCAGGCTTTTCTGGCTATCCACAGCCACCTGCACAGTCTTACGGCGGTGGACCAG
CCCAGGTTCCAGTCCCAGGTGGCTTTCCTGGAGGGCAGATGCCGTCTCAGTACCCCGGAGGACA
GTCTCCCTACCCTGGCCAGCCTGCTGCGATGACTCAGGGCACCCAAGGAACAATCCGCCCAGCC
TCCAACTTCGATGCTATGAGAGATGCAGAGATTCTCCGCAAAGCAATGAAGGGGTTTGGGACTG
ATGAGCAAGCGATTGTGGATGTCGTGTCTAACCGTTCCAATGACCAGAGGCAACAAATTAAAGC
AGCTTTTAAGACCATGTATGGCAAGGATTTAATTAAAGATCTCAAGTCAGAGTTGAGTGGAAAC
ATGGAAGAATTAATCCTTGCCCTGTTCATGCCTCCTACATACTATGATGCCTGGAGTTTGCGGA
AGGCGATACAGGGAGCAGGAACTCAAGAGCGTGTGTTGATAGAGATTTTGTGCACAAGAACAAA
TCAAGAAATCCGAGACATTGTTAGATGCTATCAATTAGAATTTGGACGCGAGCTCGAGAGGGAC
ATTAGATCGGATACCTCAGGACATTTCGAACGGCTCCTCGTGTCCATGTGCCAGGGAAACCGTG
ACGAGAGCCCAAGTATAAACCACCAGATGGCCCAGGAAGATGCCCAGCGCCTCTATCAGGCTGG
GGAGGGGAGGCTAGGGACAGACGAATCCTGTTTCAACATGATCCTCGCCACAAGGAGCTTCCCT
CAGCTGAGAGCCACCATGGAGGCTTATTCCAGGATGGCTAATCGAGATTTGCTAAGCAGTGTGA
GCCGGGAATTTTCCGGATACGTTGAAAGCGGTTTGAAGACCATATTGCAGTGCGCCCTCAACCG
CCCTGCCTTCTTCGCCGAGCGACTCTACTATTCCATGAAAGGCGCTGGAACAGATGACTCCACC
CTGGTCAGGATTGTGGTCACTCGGAGTGAGATTGACCTCGTTCAGATAAAACAGATGTTCACCC
AGATGTATCAGAAGACTCTAAGCACGATGATTGCAAGTGACACCAGTGGAGATTACAGGAAGCT
GCTCCTGGCCATCGTTGGCCAGTGACGGGGATTTTTTTCCCTTTAAGGAATGAAGCTCTTCAGG
GCCTATCTTTCTGAGCAATGAGACCTGCATGCAGCCACGTCAGACACCAACTGACCAGAGTGCT
TTTCCACTGAGGCCTGTCAGGGGGTGTGCTGCGTTTGCACATGTTGTCACTGCCTTAATTCTAA
TGTTAGTCTCTTTCTTTCTGTATCCAATCAGTGTAAAAGCCATGTCAATGACATAGTAATGTAA
ATTTGTAAAGCTTCACTCCCACTGCTTTCACTTTAATCCGGATTTCAAATTAAAAAAAATTCAC
AGCAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006251624 ⟹ XP_006251686

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	3,871,365 - 3,897,827 (+)	NCBI
mRatBN7.2	15	3,822,229 - 3,849,659 (+)	NCBI
Rnor_6.0	15	4,254,818 - 4,281,296 (+)	NCBI
Rnor_5.0	15	8,355,756 - 8,382,551 (+)	NCBI

Sequence:

show sequence

TGCTGGGGTGGGTTGGGCATGCTTTCGCCGCGTGCGGAAGGACTGGGGAGGCCTGTTGGTAAAT
CACTCTGCTAGGCTTAGAGTGGGATGCCAGGGAGCAGTGGCACCCCGCTTTCGGTCAGAATGTC
ATACCCAGGCTACCCCCCGACAGGCTACCCACCTTTCCCTGGATATCCTCCTGCAGGTCAGGAG
TCCTCTTTCCCCACTTCGGGTCAGTATCCGTACCCTAGTGGCTTTCCACCAATGGGAGGAGGTG
CTTACCCACCAGCTCCAAGTGGTGGCTACCCAGGAGCTGGAGGCTACCCCTCACCTGGAGGTTA
TCCAGCCCCTGGGGGCTATCCTGGAACCCTAAATCCAGGGGGTCCTCCATCCTATCCTGGAGGT
CAAGGCTTTGGGGCCCCACCTGGTGGGGCAGGCTTTTCTGGCTATCCACAGCCACCTGCACAGT
CTTACGGCGGTGGACCAGCCCAGGTTCCAGTCCCAGGTGGCTTTCCTGGAGGGCAGATGCCGTC
TCAGTACCCCGGAGGACAGTCTCCCTACCCTGGCCAGATTGACACAGAGTCCTTCTCTTCCTAT
CCTGCTTTCTCCCCTGTTTCTTTGGATTATAGCAGTGATCCTGCTGCGATGACTCAGGGCACCC
AAGGAACAATCCGCCCAGCCTCCAACTTCGATGCTATGAGAGATGCAGAGATTCTCCGCAAAGC
AATGAAGGGGTTTGGGACTGATGAGCAAGCGATTGTGGATGTCGTGTCTAACCGTTCCAATGAC
CAGAGGCAACAAATTAAAGCAGCTTTTAAGACCATGTATGGCAAGGATTTAATTAAAGATCTCA
AGTCAGAGTTGAGTGGAAACATGGAAGAATTAATCCTTGCCCTGTTCATGCCTCCTACATACTA
TGATGCCTGGAGTTTGCGGAAGGCGATACAGGGAGCAGGAACTCAAGAGCGTGTGTTGATAGAG
ATTTTGTGCACAAGAACAAATCAAGAAATCCGAGACATTGTTAGATGCTATCAATTAGAATTTG
GACGCGAGCTCGAGAGGGACATTAGATCGGATACCTCAGGACATTTCGAACGGCTCCTCGTGTC
CATGTGCCAGGGAAACCGTGACGAGAGCCCAAGTATAAACCACCAGATGGCCCAGGAAGATGCC
CAGCGCCTCTATCAGGCTGGGGAGGGGAGGCTAGGGACAGACGAATCCTGTTTCAACATGATCC
TCGCCACAAGGAGCTTCCCTCAGCTGAGAGCCACCATGGAGGCTTATTCCAGGATGGCTAATCG
AGATTTGCTAAGCAGTGTGAGCCGGGAATTTTCCGGATACGTTGAAAGCGGTTTGAAGACCATA
TTGCAGTGCGCCCTCAACCGCCCTGCCTTCTTCGCCGAGCGACTCTACTATTCCATGAAAGGCG
CTGGAACAGATGACTCCACCCTGGTCAGGATTGTGGTCACTCGGAGTGAGATTGACCTCGTTCA
GATAAAACAGATGTTCACCCAGATGTATCAGAAGACTCTAAGCACGATGATTGCAAGTGACACC
AGTGGAGATTACAGGAAGCTGCTCCTGGCCATCGTTGGCCAGTGACGGGGATTTTTTTCCCTTT
AAGGAATGAAGCTCTTCAGGGCCTATCTTTCTGAGCAATGAGACCTGCATGCAGCCACGTCAGA
CACCAACTGACCAGAGTGCTTTTCCACTGAGGCCTGTCAGGGGGTGTGCTGCGTTTGCACATGT
TGTCACTGCCTTAATTCTAATGTTAGTCTCTTTCTTTCTGTATCCAATCAGTGTAAAAGCCATG
TCAATGACATAGTAATGTAAATTTGTAAAGCTTCACTCCCACTGCTTTCACTTTAATCCGGATT
TCAAATTAAAAAAAATTCACAGCAATCTCTAA

hide sequence

RefSeq Acc Id:

XM_006251625 ⟹ XP_006251687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	3,869,180 - 3,897,827 (+)	NCBI
mRatBN7.2	15	3,821,814 - 3,849,659 (+)	NCBI
Rnor_6.0	15	4,254,470 - 4,281,296 (+)	NCBI
Rnor_5.0	15	8,355,756 - 8,382,551 (+)	NCBI

Sequence:

show sequence

GGAGTAGATTCAACTCGGAGAGAGAGACACGCGTTAAAACCAGCAGAGCCACCTGAGGGGCGCA
GGGTCCCGCCCGGGCTTGGGGGCGGTCCAGGCAGCCAGCATCCTCGCGCCGCCCATGCGCCACG
CCCTCCGGCCCTCCCTGGCTCCATATTGCAGGAAAGCGGGCTAGGGTGTGACGCTGCTTTCTGG
TTCAGAATGTCATACCCAGGCTACCCCCCGACAGGCTACCCACCTTTCCCTGGATATCCTCCTG
CAGGTCAGGAGTCCTCTTTCCCCACTTCGGGTCAGTATCCGTACCCTAGTGGCTTTCCACCAAT
GGGAGGAGGTGCTTACCCACCAGCTCCAAGTGGTGGCTACCCAGGAGCTGGAGGCTACCCCTCA
CCTGGAGGTTATCCAGCCCCTGGGGGCTATCCTGGAACCCTAAATCCAGGGGGTCCTCCATCCT
ATCCTGGAGGTCAAGGCTTTGGGGCCCCACCTGGTGGGGCAGGCTTTTCTGGCTATCCACAGCC
ACCTGCACAGTCTTACGGCGGTGGACCAGCCCAGGTTCCAGTCCCAGGTGGCTTTCCTGGAGGG
CAGATGCCGTCTCAGTACCCCGGAGGACAGTCTCCCTACCCTGGCCAGATTGACACAGAGTCCT
TCTCTTCCTATCCTGCTTTCTCCCCTGTTTCTTTGGATTATAGCAGTGATCCTGCTGCGATGAC
TCAGGGCACCCAAGGAACAATCCGCCCAGCCTCCAACTTCGATGCTATGAGAGATGCAGAGATT
CTCCGCAAAGCAATGAAGGGGTTTGGGACTGATGAGCAAGCGATTGTGGATGTCGTGTCTAACC
GTTCCAATGACCAGAGGCAACAAATTAAAGCAGCTTTTAAGACCATGTATGGCAAGGATTTAAT
TAAAGATCTCAAGTCAGAGTTGAGTGGAAACATGGAAGAATTAATCCTTGCCCTGTTCATGCCT
CCTACATACTATGATGCCTGGAGTTTGCGGAAGGCGATACAGGGAGCAGGAACTCAAGAGCGTG
TGTTGATAGAGATTTTGTGCACAAGAACAAATCAAGAAATCCGAGACATTGTTAGATGCTATCA
ATTAGAATTTGGACGCGAGCTCGAGAGGGACATTAGATCGGATACCTCAGGACATTTCGAACGG
CTCCTCGTGTCCATGTGCCAGGGAAACCGTGACGAGAGCCCAAGTATAAACCACCAGATGGCCC
AGGAAGATGCCCAGCGCCTCTATCAGGCTGGGGAGGGGAGGCTAGGGACAGACGAATCCTGTTT
CAACATGATCCTCGCCACAAGGAGCTTCCCTCAGCTGAGAGCCACCATGGAGGCTTATTCCAGG
ATGGCTAATCGAGATTTGCTAAGCAGTGTGAGCCGGGAATTTTCCGGATACGTTGAAAGCGGTT
TGAAGACCATATTGCAGTGCGCCCTCAACCGCCCTGCCTTCTTCGCCGAGCGACTCTACTATTC
CATGAAAGGCGCTGGAACAGATGACTCCACCCTGGTCAGGATTGTGGTCACTCGGAGTGAGATT
GACCTCGTTCAGATAAAACAGATGTTCACCCAGATGTATCAGAAGACTCTAAGCACGATGATTG
CAAGTGACACCAGTGGAGATTACAGGAAGCTGCTCCTGGCCATCGTTGGCCAGTGACGGGGATT
TTTTTCCCTTTAAGGAATGAAGCTCTTCAGGGCCTATCTTTCTGAGCAATGAGACCTGCATGCA
GCCACGTCAGACACCAACTGACCAGAGTGCTTTTCCACTGAGGCCTGTCAGGGGGTGTGCTGCG
TTTGCACATGTTGTCACTGCCTTAATTCTAATGTTAGTCTCTTTCTTTCTGTATCCAATCAGTG
TAAAAGCCATGTCAATGACATAGTAATGTAAATTTGTAAAGCTTCACTCCCACTGCTTTCACTT
TAATCCGGATTTCAAATTAAAAAAAATTCACAGCAATCTCTAA

hide sequence

RefSeq Acc Id:

XM_006251626 ⟹ XP_006251688

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	3,869,180 - 3,897,827 (+)	NCBI
mRatBN7.2	15	3,821,798 - 3,849,659 (+)	NCBI
Rnor_6.0	15	4,254,603 - 4,281,296 (+)	NCBI
Rnor_5.0	15	8,355,756 - 8,382,551 (+)	NCBI

Sequence:

show sequence

CGGCCCTCCCTGGCTCCATATTGCAGGAAAGCGGGCTAGGGTGTGACGCTGCTTTCTGGTTCAG
TCCTTGACCCTTACCAGACGTCCAGGTAACCAAGATGCAGAGGGGAATGGCTAAACCGGGGGAC
AAGTGAAAAGACGCAAGAATGTCATACCCAGGCTACCCCCCGACAGGCTACCCACCTTTCCCTG
GATATCCTCCTGCAGGTCAGGAGTCCTCTTTCCCCACTTCGGGTCAGTATCCGTACCCTAGTGG
CTTTCCACCAATGGGAGGAGGTGCTTACCCACCAGCTCCAAGTGGTGGCTACCCAGGAGCTGGA
GGCTACCCCTCACCTGGAGGTTATCCAGCCCCTGGGGGCTATCCTGGAACCCTAAATCCAGGGG
GTCCTCCATCCTATCCTGGAGGTCAAGGCTTTGGGGCCCCACCTGGTGGGGCAGGCTTTTCTGG
CTATCCACAGCCACCTGCACAGTCTTACGGCGGTGGACCAGCCCAGGTTCCAGTCCCAGGTGGC
TTTCCTGGAGGGCAGATGCCGTCTCAGTACCCCGGAGGACAGTCTCCCTACCCTGGCCAGATTG
ACACAGAGTCCTTCTCTTCCTATCCTGCTTTCTCCCCTGTTTCTTTGGATTATAGCAGTGATCC
TGCTGCGATGACTCAGGGCACCCAAGGAACAATCCGCCCAGCCTCCAACTTCGATGCTATGAGA
GATGCAGAGATTCTCCGCAAAGCAATGAAGGGGTTTGGGACTGATGAGCAAGCGATTGTGGATG
TCGTGTCTAACCGTTCCAATGACCAGAGGCAACAAATTAAAGCAGCTTTTAAGACCATGTATGG
CAAGGATTTAATTAAAGATCTCAAGTCAGAGTTGAGTGGAAACATGGAAGAATTAATCCTTGCC
CTGTTCATGCCTCCTACATACTATGATGCCTGGAGTTTGCGGAAGGCGATACAGGGAGCAGGAA
CTCAAGAGCGTGTGTTGATAGAGATTTTGTGCACAAGAACAAATCAAGAAATCCGAGACATTGT
TAGATGCTATCAATTAGAATTTGGACGCGAGCTCGAGAGGGACATTAGATCGGATACCTCAGGA
CATTTCGAACGGCTCCTCGTGTCCATGTGCCAGGGAAACCGTGACGAGAGCCCAAGTATAAACC
ACCAGATGGCCCAGGAAGATGCCCAGCGCCTCTATCAGGCTGGGGAGGGGAGGCTAGGGACAGA
CGAATCCTGTTTCAACATGATCCTCGCCACAAGGAGCTTCCCTCAGCTGAGAGCCACCATGGAG
GCTTATTCCAGGATGGCTAATCGAGATTTGCTAAGCAGTGTGAGCCGGGAATTTTCCGGATACG
TTGAAAGCGGTTTGAAGACCATATTGCAGTGCGCCCTCAACCGCCCTGCCTTCTTCGCCGAGCG
ACTCTACTATTCCATGAAAGGCGCTGGAACAGATGACTCCACCCTGGTCAGGATTGTGGTCACT
CGGAGTGAGATTGACCTCGTTCAGATAAAACAGATGTTCACCCAGATGTATCAGAAGACTCTAA
GCACGATGATTGCAAGTGACACCAGTGGAGATTACAGGAAGCTGCTCCTGGCCATCGTTGGCCA
GTGACGGGGATTTTTTTCCCTTTAAGGAATGAAGCTCTTCAGGGCCTATCTTTCTGAGCAATGA
GACCTGCATGCAGCCACGTCAGACACCAACTGACCAGAGTGCTTTTCCACTGAGGCCTGTCAGG
GGGTGTGCTGCGTTTGCACATGTTGTCACTGCCTTAATTCTAATGTTAGTCTCTTTCTTTCTGT
ATCCAATCAGTGTAAAAGCCATGTCAATGACATAGTAATGTAAATTTGTAAAGCTTCACTCCCA
CTGCTTTCACTTTAATCCGGATTTCAAATTAAAAAAAATTCACAGCAATCTCTAA

hide sequence

RefSeq Acc Id:

XM_006251627 ⟹ XP_006251689

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	3,871,206 - 3,897,827 (+)	NCBI
mRatBN7.2	15	3,822,229 - 3,849,659 (+)	NCBI
Rnor_6.0	15	4,254,819 - 4,281,296 (+)	NCBI
Rnor_5.0	15	8,355,756 - 8,382,551 (+)	NCBI

Sequence:

show sequence

GCTGGGGTGGGTTGGGCATGCTTTCGCCGCGTGCGGAAGGACTGGGGAGGCCTGTTGGTAAATC
ACTCTGCTAGGCTTAGAGTGGGATGCCAGGGAGCAGTGGCACCCCGCTTTCGGTCAGAATGTCA
TACCCAGGCTACCCCCCGACAGGCTACCCACCTTTCCCTGGATATCCTCCTGCAGGTCAGGAGT
CCTCTTTCCCCACTTCGGGTCAGTATCCGTACCCTAGTGGCTTTCCACCAATGGGAGGAGGTGC
TTACCCACCAGCTCCAAGTGGTGGCTACCCAGGAGCTGGAGGCTACCCCTCACCTGGAGGTTAT
CCAGCCCCTGGGGGCTATCCTGGAACCCTAAATCCAGGGGGTCCTCCATCCTATCCTGGAGGTC
AAGGCTTTGGGGCCCCACCTGGTGGGGCAGGCTTTTCTGGCTATCCACAGCCACCTGCACAGTC
TTACGGCGGTGGACCAGCCCAGGTTCCAGTCCCAGGTGGCTTTCCTGGAGGGCAGATGCCGTCT
CAGTACCCCGGAGGACAGTCTCCCTACCCTGGCCAGCCTGCTGCGATGACTCAGGGCACCCAAG
GAACAATCCGCCCAGCCTCCAACTTCGATGCTATGAGAGATGCAGAGATTCTCCGCAAAGCAAT
GAAGGGGTTTGGGACTGATGAGCAAGCGATTGTGGATGTCGTGTCTAACCGTTCCAATGACCAG
AGGCAACAAATTAAAGCAGCTTTTAAGACCATGTATGGCAAGGATTTAATTAAAGATCTCAAGT
CAGAGTTGAGTGGAAACATGGAAGAATTAATCCTTGCCCTGTTCATGCCTCCTACATACTATGA
TGCCTGGAGTTTGCGGAAGGCGATACAGGGAGCAGGAACTCAAGAGCGTGTGTTGATAGAGATT
TTGTGCACAAGAACAAATCAAGAAATCCGAGACATTGTTAGATGCTATCAATTAGAATTTGGAC
GCGAGCTCGAGAGGGACATTAGATCGGATACCTCAGGACATTTCGAACGGCTCCTCGTGTCCAT
GTGCCAGGGAAACCGTGACGAGAGCCCAAGTATAAACCACCAGATGGCCCAGGAAGATGCCCAG
CGCCTCTATCAGGCTGGGGAGGGGAGGCTAGGGACAGACGAATCCTGTTTCAACATGATCCTCG
CCACAAGGAGCTTCCCTCAGCTGAGAGCCACCATGGAGGCTTATTCCAGGATGGCTAATCGAGA
TTTGCTAAGCAGTGTGAGCCGGGAATTTTCCGGATACGTTGAAAGCGGTTTGAAGACCATATTG
CAGTGCGCCCTCAACCGCCCTGCCTTCTTCGCCGAGCGACTCTACTATTCCATGAAAGGCGCTG
GAACAGATGACTCCACCCTGGTCAGGATTGTGGTCACTCGGAGTGAGATTGACCTCGTTCAGAT
AAAACAGATGTTCACCCAGATGTATCAGAAGACTCTAAGCACGATGATTGCAAGTGACACCAGT
GGAGATTACAGGAAGCTGCTCCTGGCCATCGTTGGCCAGTGACGGGGATTTTTTTCCCTTTAAG
GAATGAAGCTCTTCAGGGCCTATCTTTCTGAGCAATGAGACCTGCATGCAGCCACGTCAGACAC
CAACTGACCAGAGTGCTTTTCCACTGAGGCCTGTCAGGGGGTGTGCTGCGTTTGCACATGTTGT
CACTGCCTTAATTCTAATGTTAGTCTCTTTCTTTCTGTATCCAATCAGTGTAAAAGCCATGTCA
ATGACATAGTAATGTAAATTTGTAAAGCTTCACTCCCACTGCTTTCACTTTAATCCGGATTTCA
AATTAAAAAAAATTCACAGCAATCTCTAA

hide sequence

RefSeq Acc Id:

XM_063273920 ⟹ XP_063129990

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	3,871,232 - 3,897,827 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_569100	(Get FASTA)	NCBI Sequence Viewer
	XP_006251686	(Get FASTA)	NCBI Sequence Viewer
	XP_006251687	(Get FASTA)	NCBI Sequence Viewer
	XP_006251688	(Get FASTA)	NCBI Sequence Viewer
	XP_006251689	(Get FASTA)	NCBI Sequence Viewer
	XP_063129990	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH70896	(Get FASTA)	NCBI Sequence Viewer
	AAL31765	(Get FASTA)	NCBI Sequence Viewer
	EDL86224	(Get FASTA)	NCBI Sequence Viewer
	EDL86225	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000058397
	ENSRNOP00000058397.4
	ENSRNOP00000080216
	ENSRNOP00000080216.2
	ENSRNOP00000090513
	ENSRNOP00000090513.2
	ENSRNOP00000091902.1

RefSeq Acc Id:

NP_569100 ⟸ NM_130416

- UniProtKB:

Q6IRJ7 (UniProtKB/TrEMBL), A0A8I5ZQ42 (UniProtKB/TrEMBL), Q8VIN2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSYPGYPPTGYPPFPGYPPAGQESSFPTSGQYPYPSGFPPMGGGAYPPAPSGGYPGAGGYPSPG
GYPAPGGYPGTLNPGGPPSYPGGQGFGAPPGGAGFSGYPQPPAQSYGGGPAQVPVPGGFPGGQM
PSQYPGGQSPYPGQPAAMTQGTQGTIRPASNFDAMRDAEILRKAMKGFGTDEQAIVDVVSNRSN
DQRQQIKAAFKTMYGKDLIKDLKSELSGNMEELILALFMPPTYYDAWSLRKAIQGAGTQERVLI
EILCTRTNQEIRDIVRCYQLEFGRELERDIRSDTSGHFERLLVSMCQGNRDESPSINHQMAQED
AQRLYQAGEGRLGTDESCFNMILATRSFPQLRATMEAYSRMANRDLLSSVSREFSGYVESGLKT
ILQCALNRPAFFAERLYYSMKGAGTDDSTLVRIVVTRSEIDLVQIKQMFTQMYQKTLSTMIASD
TSGDYRKLLLAIVGQ

hide sequence

RefSeq Acc Id:	XP_006251687 ⟸ XM_006251625
- Peptide Label:	isoform X2
- UniProtKB:	F7F6D1 (UniProtKB/TrEMBL), Q8VIN2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYPGYPPTGYPPFPGYPPAGQESSFPTSGQYPYPSGFPPMGGGAYPPAPSGGYPGAGGYPSPG GYPAPGGYPGTLNPGGPPSYPGGQGFGAPPGGAGFSGYPQPPAQSYGGGPAQVPVPGGFPGGQM PSQYPGGQSPYPGQIDTESFSSYPAFSPVSLDYSSDPAAMTQGTQGTIRPASNFDAMRDAEILR KAMKGFGTDEQAIVDVVSNRSNDQRQQIKAAFKTMYGKDLIKDLKSELSGNMEELILALFMPPT YYDAWSLRKAIQGAGTQERVLIEILCTRTNQEIRDIVRCYQLEFGRELERDIRSDTSGHFERLL VSMCQGNRDESPSINHQMAQEDAQRLYQAGEGRLGTDESCFNMILATRSFPQLRATMEAYSRMA NRDLLSSVSREFSGYVESGLKTILQCALNRPAFFAERLYYSMKGAGTDDSTLVRIVVTRSEIDL VQIKQMFTQMYQKTLSTMIASDTSGDYRKLLLAIVGQ hide sequence

RefSeq Acc Id:	XP_006251688 ⟸ XM_006251626
- Peptide Label:	isoform X2
- UniProtKB:	F7F6D1 (UniProtKB/TrEMBL), Q8VIN2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYPGYPPTGYPPFPGYPPAGQESSFPTSGQYPYPSGFPPMGGGAYPPAPSGGYPGAGGYPSPG GYPAPGGYPGTLNPGGPPSYPGGQGFGAPPGGAGFSGYPQPPAQSYGGGPAQVPVPGGFPGGQM PSQYPGGQSPYPGQIDTESFSSYPAFSPVSLDYSSDPAAMTQGTQGTIRPASNFDAMRDAEILR KAMKGFGTDEQAIVDVVSNRSNDQRQQIKAAFKTMYGKDLIKDLKSELSGNMEELILALFMPPT YYDAWSLRKAIQGAGTQERVLIEILCTRTNQEIRDIVRCYQLEFGRELERDIRSDTSGHFERLL VSMCQGNRDESPSINHQMAQEDAQRLYQAGEGRLGTDESCFNMILATRSFPQLRATMEAYSRMA NRDLLSSVSREFSGYVESGLKTILQCALNRPAFFAERLYYSMKGAGTDDSTLVRIVVTRSEIDL VQIKQMFTQMYQKTLSTMIASDTSGDYRKLLLAIVGQ hide sequence

RefSeq Acc Id:	XP_006251686 ⟸ XM_006251624
- Peptide Label:	isoform X1
- UniProtKB:	Q8VIN2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGSSGTPLSVRMSYPGYPPTGYPPFPGYPPAGQESSFPTSGQYPYPSGFPPMGGGAYPPAPSG GYPGAGGYPSPGGYPAPGGYPGTLNPGGPPSYPGGQGFGAPPGGAGFSGYPQPPAQSYGGGPAQ VPVPGGFPGGQMPSQYPGGQSPYPGQIDTESFSSYPAFSPVSLDYSSDPAAMTQGTQGTIRPAS NFDAMRDAEILRKAMKGFGTDEQAIVDVVSNRSNDQRQQIKAAFKTMYGKDLIKDLKSELSGNM EELILALFMPPTYYDAWSLRKAIQGAGTQERVLIEILCTRTNQEIRDIVRCYQLEFGRELERDI RSDTSGHFERLLVSMCQGNRDESPSINHQMAQEDAQRLYQAGEGRLGTDESCFNMILATRSFPQ LRATMEAYSRMANRDLLSSVSREFSGYVESGLKTILQCALNRPAFFAERLYYSMKGAGTDDSTL VRIVVTRSEIDLVQIKQMFTQMYQKTLSTMIASDTSGDYRKLLLAIVGQ hide sequence

RefSeq Acc Id:	XP_006251689 ⟸ XM_006251627
- Peptide Label:	isoform X3
- UniProtKB:	Q8VIN2 (UniProtKB/TrEMBL), A0A8I6A9P3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGSSGTPLSVRMSYPGYPPTGYPPFPGYPPAGQESSFPTSGQYPYPSGFPPMGGGAYPPAPSG GYPGAGGYPSPGGYPAPGGYPGTLNPGGPPSYPGGQGFGAPPGGAGFSGYPQPPAQSYGGGPAQ VPVPGGFPGGQMPSQYPGGQSPYPGQPAAMTQGTQGTIRPASNFDAMRDAEILRKAMKGFGTDE QAIVDVVSNRSNDQRQQIKAAFKTMYGKDLIKDLKSELSGNMEELILALFMPPTYYDAWSLRKA IQGAGTQERVLIEILCTRTNQEIRDIVRCYQLEFGRELERDIRSDTSGHFERLLVSMCQGNRDE SPSINHQMAQEDAQRLYQAGEGRLGTDESCFNMILATRSFPQLRATMEAYSRMANRDLLSSVSR EFSGYVESGLKTILQCALNRPAFFAERLYYSMKGAGTDDSTLVRIVVTRSEIDLVQIKQMFTQM YQKTLSTMIASDTSGDYRKLLLAIVGQ hide sequence

Ensembl Acc Id:

ENSRNOP00000058397 ⟸ ENSRNOT00000061686

Ensembl Acc Id:

ENSRNOP00000079081 ⟸ ENSRNOT00000102608

Ensembl Acc Id:

ENSRNOP00000091902 ⟸ ENSRNOT00000116779

Ensembl Acc Id:

ENSRNOP00000080216 ⟸ ENSRNOT00000104138

Ensembl Acc Id:

ENSRNOP00000090513 ⟸ ENSRNOT00000108222

RefSeq Acc Id:	XP_063129990 ⟸ XM_063273920
- Peptide Label:	isoform X2
- UniProtKB:	Q8VIN2 (UniProtKB/TrEMBL), F7F6D1 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q6IRJ7-F1-model_v2	AlphaFold	Q6IRJ7	1-463	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699564

Promoter ID:

EPDNEW_R10088

Type:

initiation region

Name:

Anxa7_1

Description:

annexin A7

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	4,254,620 - 4,254,680	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621173	AgrOrtholog
BioCyc Gene	G2FUF-14538	BioCyc
Ensembl Genes	ENSRNOG00000007136	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000061686	ENTREZGENE
	ENSRNOT00000061686.5	UniProtKB/TrEMBL
	ENSRNOT00000104138	ENTREZGENE
	ENSRNOT00000104138.2	UniProtKB/TrEMBL
	ENSRNOT00000108222	ENTREZGENE
	ENSRNOT00000108222.2	UniProtKB/TrEMBL
	ENSRNOT00000116779.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.220.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7099644	IMAGE-MGC_LOAD
InterPro	Annexin	UniProtKB/TrEMBL
	Annexin_repeat	UniProtKB/TrEMBL
	Annexin_repeat_CS	UniProtKB/TrEMBL
	Annexin_sf	UniProtKB/TrEMBL
KEGG Report	rno:155423	UniProtKB/TrEMBL
MGC_CLONE	MGC:91520	IMAGE-MGC_LOAD
NCBI Gene	155423	ENTREZGENE
PANTHER	ANNEXIN	UniProtKB/TrEMBL
	ANNEXIN A7	UniProtKB/TrEMBL
Pfam	Annexin	UniProtKB/TrEMBL
PhenoGen	Anxa7	PhenoGen
PRINTS	ANNEXIN	UniProtKB/TrEMBL
	ANNEXINVII	UniProtKB/TrEMBL
PROSITE	ANNEXIN	UniProtKB/TrEMBL
	ANNEXIN_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000007136	RatGTEx
SMART	ANX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47874	UniProtKB/TrEMBL
UniProt	A0A8I5ZQ42	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A9P3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AH11_RAT	UniProtKB/TrEMBL
	F7F6D1	ENTREZGENE, UniProtKB/TrEMBL
	Q6IRJ7	ENTREZGENE, UniProtKB/TrEMBL
	Q8VIN2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-02-26	Anxa7	annexin A7			Symbol and Name status set to approved	625702	APPROVED
2002-08-07	Anxa7	annexin A7			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_process	mediates the fusion of lamellar body with plasma membrane	634602
gene_regulation	binding to the membrane fraction greatly enhanced by calcium ionophore (A23187) or phorbol 12-myristate 13-acetate (PMA); the PMA effect blocked by protein kinase inhibitors	634602

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD