Faim (Fas apoptotic inhibitory molecule) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Faim (Fas apoptotic inhibitory molecule) Rattus norvegicus
Analyze
Symbol: Faim
Name: Fas apoptotic inhibitory molecule
RGD ID: 620572
Description: Involved in positive regulation of canonical NF-kappaB signal transduction and positive regulation of neurogenesis. Predicted to be located in cytoplasm. Orthologous to human FAIM (Fas apoptotic inhibitory molecule); INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: fas apoptotic inhibitory molecule 1; LOC100362113; rFAIM
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88108,423,259 - 108,445,365 (+)NCBIGRCr8
mRatBN7.2899,543,877 - 99,569,499 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl899,542,405 - 99,560,562 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8105,210,396 - 105,226,216 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08103,409,696 - 103,425,516 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08101,252,200 - 101,268,021 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08107,225,119 - 107,247,228 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8106,816,152 - 106,827,580 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl8107,225,212 - 107,241,224 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08106,649,714 - 106,671,537 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.489,522,803 - 9,539,269 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18103,854,182 - 103,869,924 (+)NCBI
Celera898,949,776 - 98,965,494 (+)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. A novel gene coding for a Fas apoptosis inhibitory molecule (FAIM) isolated from inducibly Fas-resistant B lymphocytes. Schneider TJ, etal., J Exp Med 1999 Mar 15;189(6):949-56.
6. The death receptor antagonist FAIM promotes neurite outgrowth by a mechanism that depends on ERK and NF-kapp B signaling. Sole C, etal., J Cell Biol 2004 Nov 8;167(3):479-92. Epub 2004 Nov 1.
Additional References at PubMed
PMID:24305822   PMID:28383554  


Genomics

Comparative Map Data
Faim
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88108,423,259 - 108,445,365 (+)NCBIGRCr8
mRatBN7.2899,543,877 - 99,569,499 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl899,542,405 - 99,560,562 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8105,210,396 - 105,226,216 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08103,409,696 - 103,425,516 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08101,252,200 - 101,268,021 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08107,225,119 - 107,247,228 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8106,816,152 - 106,827,580 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl8107,225,212 - 107,241,224 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08106,649,714 - 106,671,537 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.489,522,803 - 9,539,269 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18103,854,182 - 103,869,924 (+)NCBI
Celera898,949,776 - 98,965,494 (+)NCBICelera
Cytogenetic Map8q31NCBI
FAIM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383138,608,771 - 138,633,376 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3138,608,606 - 138,633,376 (+)EnsemblGRCh38hg38GRCh38
GRCh373138,327,613 - 138,352,218 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363139,810,232 - 139,834,908 (+)NCBINCBI36Build 36hg18NCBI36
Celera3136,752,476 - 136,777,527 (+)NCBICelera
Cytogenetic Map3q22.3NCBI
HuRef3135,702,306 - 135,726,894 (+)NCBIHuRef
CHM1_13138,291,316 - 138,316,081 (+)NCBICHM1_1
T2T-CHM13v2.03141,349,369 - 141,374,071 (+)NCBIT2T-CHM13v2.0
Faim
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39998,868,426 - 98,884,076 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl998,868,426 - 98,884,074 (+)EnsemblGRCm39 Ensembl
GRCm38998,986,373 - 99,002,019 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl998,986,373 - 99,002,021 (+)EnsemblGRCm38mm10GRCm38
MGSCv37998,886,792 - 98,902,438 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36998,795,725 - 98,811,370 (+)NCBIMGSCv36mm8
Celera998,524,144 - 98,539,790 (+)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map951.41NCBI
Faim
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955501447,094 - 461,396 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955501447,085 - 459,691 (-)NCBIChiLan1.0ChiLan1.0
FAIM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22136,514,995 - 136,547,629 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13136,521,207 - 136,547,789 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03135,639,242 - 135,664,449 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13143,243,585 - 143,267,787 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3143,243,675 - 143,267,787 (+)Ensemblpanpan1.1panPan2
FAIM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12334,807,093 - 34,822,577 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2334,807,249 - 34,822,244 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2334,800,789 - 34,829,125 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02335,349,544 - 35,378,112 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2335,349,705 - 35,364,480 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12335,030,132 - 35,058,685 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02335,096,065 - 35,124,631 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02335,346,264 - 35,374,614 (+)NCBIUU_Cfam_GSD_1.0
Faim
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560274,103,727 - 74,123,257 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936540843,152 - 863,947 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936540843,463 - 863,029 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAIM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1379,397,931 - 79,411,905 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11379,397,647 - 79,411,917 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21387,082,125 - 87,092,596 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FAIM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11551,906,832 - 51,932,145 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1551,905,188 - 51,921,162 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604124,911,027 - 24,935,973 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Faim
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473015,114,558 - 15,145,027 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Faim
176 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:498
Count of miRNA genes:164
Interacting mature miRNAs:188
Transcripts:ENSRNOT00000045329, ENSRNOT00000045821, ENSRNOT00000046832, ENSRNOT00000047613
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)854259986100382532Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)893535351123900184Rat
8693654Alc32Alcohol consumption QTL 3220.755drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)888612425107550209Rat
1358912Bw51Body weight QTL 512.95body mass (VT:0001259)body weight (CMO:0000012)851351728107062046Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
738014Anxrr15Anxiety related response QTL 153.60.005locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)895718998123900184Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)870513503118219066Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)889265192114019816Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
1358903Bp252Blood pressure QTL 25270.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)846531639119088626Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)830848259105647037Rat
2300182Bmd56Bone mineral density QTL 565.4femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)895718998123900184Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)876468691121468691Rat
1358893Bp263Blood pressure QTL 2635.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)871888757116888757Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)871888757116888757Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)882460758122812818Rat

Markers in Region
RH132415  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2899,559,527 - 99,559,737 (+)MAPPERmRatBN7.2
Rnor_6.08107,240,768 - 107,240,977NCBIRnor6.0
Rnor_6.08106,827,098 - 106,827,307NCBIRnor6.0
Rnor_5.08106,665,077 - 106,665,286UniSTSRnor5.0
Rnor_5.08106,261,481 - 106,261,690UniSTSRnor5.0
RGSC_v3.48103,850,284 - 103,850,493UniSTSRGSC3.4
RGSC_v3.429,539,084 - 9,539,293UniSTSRGSC3.4
Celera898,965,309 - 98,965,518UniSTS
RH 3.4 Map81040.19UniSTS
Cytogenetic Map8q31UniSTS
BE112969  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2899,549,810 - 99,550,237 (+)MAPPERmRatBN7.2
Rnor_6.08107,231,054 - 107,231,480NCBIRnor6.0
Rnor_6.08106,817,384 - 106,817,810NCBIRnor6.0
Rnor_5.08106,655,640 - 106,656,066UniSTSRnor5.0
Rnor_5.08106,251,767 - 106,252,193UniSTSRnor5.0
RGSC_v3.48103,840,570 - 103,840,996UniSTSRGSC3.4
RGSC_v3.429,529,370 - 9,529,796UniSTSRGSC3.4
Celera898,955,598 - 98,956,024UniSTS
RH 3.4 Map81051.79UniSTS
Cytogenetic Map8q31UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
16 4 58 151 124 124 74 36 74 12 278 129 118 57 84 50

Sequence


Ensembl Acc Id: ENSRNOT00000045329   ⟹   ENSRNOP00000038960
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl8107,225,212 - 107,240,953 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000045821   ⟹   ENSRNOP00000039749
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl899,542,405 - 99,560,562 (+)Ensembl
Rnor_6.0 Ensembl8107,229,832 - 107,241,224 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000047613   ⟹   ENSRNOP00000049149
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl899,543,912 - 99,560,562 (+)Ensembl
Rnor_6.0 Ensembl8106,816,152 - 106,827,580 (+)Ensembl
RefSeq Acc Id: NM_080895   ⟹   NP_543171
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88108,423,346 - 108,439,089 (+)NCBI
mRatBN7.2899,543,969 - 99,559,713 (+)NCBI
Rnor_6.08107,225,212 - 107,240,953 (+)NCBI
Rnor_5.08106,649,714 - 106,671,537 (+)NCBI
RGSC_v3.489,522,803 - 9,539,269 (+)RGD
Celera898,949,776 - 98,965,494 (+)RGD
Sequence:
RefSeq Acc Id: XM_002729959   ⟹   XP_002730005
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88108,423,261 - 108,439,361 (+)NCBI
mRatBN7.2899,543,882 - 99,559,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006243611   ⟹   XP_006243673
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88108,423,299 - 108,439,361 (+)NCBI
mRatBN7.2899,544,389 - 99,559,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017596121   ⟹   XP_017451610
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88108,423,259 - 108,445,365 (+)NCBI
mRatBN7.2899,543,877 - 99,569,499 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063264801   ⟹   XP_063120871
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88108,423,419 - 108,439,361 (+)NCBI
RefSeq Acc Id: NP_543171   ⟸   NM_080895
- UniProtKB: A6I2C3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000039749   ⟸   ENSRNOT00000045821
Ensembl Acc Id: ENSRNOP00000049149   ⟸   ENSRNOT00000047613
Ensembl Acc Id: ENSRNOP00000038960   ⟸   ENSRNOT00000045329
RefSeq Acc Id: XP_017451610   ⟸   XM_017596121
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_002730005   ⟸   XM_002729959
- Peptide Label: isoform X1
- UniProtKB: Q8VHR4 (UniProtKB/Swiss-Prot),   Q8R5H8 (UniProtKB/Swiss-Prot),   A6I2C2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243673   ⟸   XM_006243611
- Peptide Label: isoform X1
- UniProtKB: Q8VHR4 (UniProtKB/Swiss-Prot),   Q8R5H8 (UniProtKB/Swiss-Prot),   A6I2C2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_063120871   ⟸   XM_063264801
- Peptide Label: isoform X3
- UniProtKB: A6I2C3 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8R5H8-F1-model_v2 AlphaFold Q8R5H8 1-201 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696205
Promoter ID:EPDNEW_R6730
Type:multiple initiation site
Name:Faim_1
Description:Fas apoptotic inhibitory molecule
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08107,225,164 - 107,225,224EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620572 AgrOrtholog
BioCyc Gene G2FUF-29407 BioCyc
Ensembl Genes ENSRNOG00000030069 Ensembl, UniProtKB/Swiss-Prot
  ENSRNOG00000030463 Ensembl
  ENSRNOG00055011886 UniProtKB/Swiss-Prot
  ENSRNOG00060009169 UniProtKB/Swiss-Prot
  ENSRNOG00065006692 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000045821.4 UniProtKB/Swiss-Prot
  ENSRNOT00000047613.5 UniProtKB/Swiss-Prot
  ENSRNOT00055020218 UniProtKB/Swiss-Prot
  ENSRNOT00060015446 UniProtKB/Swiss-Prot
  ENSRNOT00065010369 UniProtKB/Swiss-Prot
Gene3D-CATH 2.40.128.180 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FAIM1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FAIM1_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:140930 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 140930 ENTREZGENE
PANTHER FAS APOPTOTIC INHIBITORY MOLECULE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FAS APOPTOTIC INHIBITORY MOLECULE FAIM UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
Pfam FAIM1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Faim PhenoGen
RatGTEx ENSRNOG00000030069 RatGTEx
  ENSRNOG00000030463 RatGTEx
  ENSRNOG00055011886 RatGTEx
  ENSRNOG00060009169 RatGTEx
  ENSRNOG00065006692 RatGTEx
UniProt A6I2C2 ENTREZGENE, UniProtKB/TrEMBL
  A6I2C3 ENTREZGENE, UniProtKB/TrEMBL
  FAIM1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q8VHR4 ENTREZGENE
UniProt Secondary Q8VHR4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-08-27 Faim  Fas apoptotic inhibitory molecule  LOC100362113  Fas apoptotic inhibitory molecule  Data merged from RGD:2318770 737654 APPROVED
2010-05-05 LOC100362113  Fas apoptotic inhibitory molecule      Symbol and Name status set to provisional 70820 PROVISIONAL
2004-09-10 Faim  Fas apoptotic inhibitory molecule      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Faim  Fas apoptotic inhibitory molecule      Symbol and Name status set to provisional 70820 PROVISIONAL